Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p12070 Brassica napus HOM05D004684 ORTHO05D027888 7.3e-86 320.5 157 100.0
BraA07t28588Z Brassica rapa HOM05D004684 ORTHO05D027888 2.1e-56 222.6 144 79.2
A07p08010 Brassica napus HOM05D004684 ORTHO05D027888 6.3e-53 211.1 104 97.1
Sp3g22110 Schrenkiella parvula HOM05D004684 ORTHO05D006904 1.1e-33 147.1 151 59.6
BcaC01g03327 Brassica carinata HOM05D004684 ORTHO05D006904 7.2e-33 144.4 151 58.3
BcaB03g14590 Brassica carinata HOM05D004684 ORTHO05D006904 2.7e-32 142.5 151 58.3
Thhalv10002467m.g Eutrema salsugineum HOM05D004684 ORTHO05D006904 3.6e-32 142.1 151 56.3
C03p53620 Brassica napus HOM05D004684 ORTHO05D006904 6.1e-32 141.4 147 59.9
BolC3t17622H Brassica oleracea HOM05D004684 ORTHO05D006904 6.1e-32 141.4 147 59.9
Carub.0003s2695 Capsella rubella HOM05D004684 ORTHO05D006904 1.0e-31 140.6 151 55.6
CARHR100400 Cardamine hirsuta HOM05D004684 ORTHO05D006904 1.4e-31 140.2 151 55.0
A03p43590 Brassica napus HOM05D004684 ORTHO05D006904 2.3e-31 139.4 147 59.2
BraA03t13496Z Brassica rapa HOM05D004684 ORTHO05D006904 2.3e-31 139.4 147 59.2
AT1G48520 Arabidopsis thaliana HOM05D004684 ORTHO05D006904 3.0e-31 139.0 151 55.0
AL3G43250 Arabidopsis lyrata HOM05D004684 ORTHO05D006904 4.0e-31 138.7 151 55.0
Rhsim04G0170900 Rhododendron simsii HOM05D004684 ORTHO05D006904 1.2e-30 137.1 151 55.0
Aa31LG8G11000 Aethionema arabicum HOM05D004684 ORTHO05D006904 1.3e-29 133.7 146 58.9
vmacro08564 Vaccinium macrocarpon HOM05D004684 ORTHO05D006904 2.2e-29 132.9 151 52.3
FvH4_4g05030 Fragaria vesca HOM05D004684 ORTHO05D006904 4.8e-29 131.7 149 54.4
RcHm_v2.0_Chr4g0395911 Rosa chinensis HOM05D004684 ORTHO05D006904 4.8e-29 131.7 152 54.6
THA.LOC104804573 Tarenaya hassleriana HOM05D004684 ORTHO05D006904 6.3e-29 131.3 152 52.6
Gohir.A09G231100 Gossypium hirsutum HOM05D004684 ORTHO05D006904 8.2e-29 131.0 151 51.7
RcHm_v2.0_Chr7g0203561 Rosa chinensis HOM05D004684 ORTHO05D006904 8.2e-29 131.0 152 53.9
MD16G1228500 Malus domestica HOM05D004684 ORTHO05D006904 1.1e-28 130.6 149 53.0
CsaV3_2G012390 Cucumis sativus L. HOM05D004684 ORTHO05D006904 1.4e-28 130.2 151 51.7
MELO3C023021.2 Cucumis melo HOM05D004684 ORTHO05D006904 5.3e-28 128.3 154 51.9
Actinidia20844 Actinidia chinensis HOM05D004684 ORTHO05D006904 9.1e-28 127.5 151 51.7
CSS0041578 Camellia sinensis var. sinensis HOM05D004684 ORTHO05D006904 9.1e-28 127.5 151 49.7
CSS0049189 Camellia sinensis var. sinensis HOM05D004684 ORTHO05D006904 9.1e-28 127.5 151 49.7
Dinv29794 Davidia involucrata HOM05D004684 ORTHO05D006904 9.1e-28 127.5 148 51.4
Gohir.D09G232200 Gossypium hirsutum HOM05D004684 ORTHO05D006904 9.1e-28 127.5 151 51.0
Gorai.006G255000 Gossypium raimondii HOM05D004684 ORTHO05D006904 1.2e-27 127.1 151 50.3
Medtr5g055940 Medicago truncatula HOM05D004684 ORTHO05D006904 1.2e-27 127.1 150 51.3
Prupe.1G050600 Prunus persica HOM05D004684 ORTHO05D006904 1.6e-27 126.7 149 51.0
Sed0004125 Sechium edule HOM05D004684 ORTHO05D006904 1.6e-27 126.7 150 51.3
Cpa.g.sc59.16 Carica papaya HOM05D004684 ORTHO05D006904 2.0e-27 126.3 151 51.0
Manes.03G157750 Manihot esculenta HOM05D004684 ORTHO05D006904 2.0e-27 126.3 151 50.3
THA.LOC104808741 Tarenaya hassleriana HOM05D004684 ORTHO05D006904 2.7e-27 125.9 150 53.3
QL06p021563 Quercus lobata HOM05D004684 ORTHO05D006904 3.5e-27 125.6 151 51.0
ClCG06G007290 Citrullus lanatus HOM05D004684 ORTHO05D006904 4.5e-27 125.2 150 50.7
Glyma.08G047100 Glycine max HOM05D004684 ORTHO05D006904 5.9e-27 124.8 153 49.7
CANSAT78G0903 Cannabis sativa HOM05D004684 ORTHO05D006904 1.0e-26 124.0 151 49.0
DCAR_002298 Daucus carota HOM05D004684 ORTHO05D006904 1.0e-26 124.0 156 51.9
Eucgr.G01176 Eucalyptus grandis HOM05D004684 ORTHO05D006904 1.0e-26 124.0 148 52.0
Eucgr.H02859 Eucalyptus grandis HOM05D004684 ORTHO05D006904 1.0e-26 124.0 148 52.0
HanXRQChr01g0023061 Helianthus annuus HOM05D004684 ORTHO05D006904 1.3e-26 123.6 151 49.0
VMungo0251G0467 Vigna mungo HOM05D004684 ORTHO05D006904 1.3e-26 123.6 153 49.7
Cfa014797 Carpinus fangiana HOM05D004684 ORTHO05D006904 1.7e-26 123.2 151 49.7
Phvul.002G322100 Phaseolus vulgaris HOM05D004684 ORTHO05D006904 1.7e-26 123.2 153 48.4
Potri.010G064700 Populus trichocarpa HOM05D004684 ORTHO05D006904 1.7e-26 123.2 153 49.0
Thecc.04G266300 Theobroma cacao HOM05D004684 ORTHO05D006904 1.7e-26 123.2 151 50.3
ECA248G0897 Erigeron canadensis HOM05D004684 ORTHO05D006904 2.2e-26 122.9 151 49.0
Sopen09g033800 Solanum pennellii HOM05D004684 ORTHO05D006904 2.2e-26 122.9 151 49.0
CiPaw.01G176700 Carya illinoinensis HOM05D004684 ORTHO05D006904 2.9e-26 122.5 151 49.7
Nn1g02992 Nelumbo nucifera HOM05D004684 ORTHO05D006904 2.9e-26 122.5 148 51.4
Potri.008G172700 Populus trichocarpa HOM05D004684 ORTHO05D006904 2.9e-26 122.5 148 50.0
TPR.G38256 Trifolium pratense HOM05D004684 ORTHO05D006904 2.9e-26 122.5 151 47.0
TAR636G2335 Trochodendron aralioides HOM05D002740 ORTHO05D003126 2.9e-26 122.5 147 51.0
PGR031G2768 Punica granatum HOM05D004684 ORTHO05D006904 3.8e-26 122.1 148 50.7
Haze_11481 Corylus avellana HOM05D004684 ORTHO05D006904 5.0e-26 121.7 151 49.0
Lj4g0011200 Lotus japonicus HOM05D004684 ORTHO05D006904 8.5e-26 120.9 151 48.3
Psat2g106400 Pisum sativum HOM05D004684 ORTHO05D006904 8.5e-26 120.9 150 48.0
arahy.Tifrunner.gnm1.ann1.1TG9FP Arachis hypogaea HOM05D004684 ORTHO05D006904 1.1e-25 120.6 154 48.7
Migut.G00560 Erythranthe guttata HOM05D004684 ORTHO05D006904 1.1e-25 120.6 151 49.7
Peaxi162Scf00531g00034 Petunia axillaris HOM05D004684 ORTHO05D006904 1.1e-25 120.6 152 47.4
QL02p071976 Quercus lobata HOM05D004684 ORTHO05D006904 1.1e-25 120.6 151 49.7
arahy.Tifrunner.gnm1.ann1.14QJGF Arachis hypogaea HOM05D004684 ORTHO05D006904 1.5e-25 120.2 154 48.1
Ciclev10004652m.g Citrus clementina HOM05D004684 ORTHO05D006904 1.5e-25 120.2 150 50.7
Lj4g0013294 Lotus japonicus HOM05D004684 ORTHO05D006904 1.5e-25 120.2 150 48.0
Solyc09g090840.3 Solanum lycopersicum HOM05D004684 ORTHO05D006904 1.5e-25 120.2 151 47.7
Duzib212G0777 Durio zibethinus HOM05D004684 ORTHO05D006904 1.9e-25 119.8 150 50.0
Glyma.05G240000 Glycine max HOM05D004684 ORTHO05D006904 1.9e-25 119.8 154 47.4
MBI07_g08913_MAGBIO Magnolia biondii HOM05D004684 ORTHO05D006904 1.9e-25 119.8 147 51.0
SalBow2G2567 Salvia bowleyana HOM05D004684 ORTHO05D006904 2.5e-25 119.4 147 49.0
AUR62015690 Chenopodium quinoa HOM05D004684 ORTHO05D006904 3.2e-25 119.0 150 48.7
Ca_04899_v3 Cicer arietinum L. HOM05D004684 ORTHO05D006904 3.2e-25 119.0 150 47.3
Nitab4.5_0005154g0090 Nicotiana tabacum HOM05D004684 ORTHO05D006904 3.2e-25 119.0 147 48.3
Psat2g046800 Pisum sativum HOM05D004684 ORTHO05D006904 3.2e-25 119.0 150 48.0
AUR62031623 Chenopodium quinoa HOM05D004684 ORTHO05D006904 4.2e-25 118.6 150 49.3
Sc19g0005610 Simmondsia chinensis HOM05D004684 ORTHO05D006904 4.2e-25 118.6 155 47.7
PGSC0003DMG400001555 Solanum tuberosum HOM05D004684 ORTHO05D006904 4.2e-25 118.6 157 45.9
FAN22G2229 Fragaria x ananassa HOM05D004684 ORTHO05D006904 5.5e-25 118.2 165 46.7
Sabra10G0042300 Salix brachista HOM05D004684 ORTHO05D006904 9.4e-25 117.5 190 41.1
Lalb_Chr09g0330801 Lupinus albus HOM05D004684 ORTHO05D006904 1.2e-24 117.1 154 47.4
TWI09G1097 Tripterygium wilfordii HOM05D004684 ORTHO05D006904 1.2e-24 117.1 151 48.3
EL10Ac3g06680 Beta vulgaris HOM05D004684 ORTHO05D006904 1.6e-24 116.7 147 47.6
Ah.04g153790 Amaranthus hybridus HOM05D004684 ORTHO05D006904 2.7e-24 115.9 157 45.9
PSO384G0234 Papaver somniferum HOM05D004684 ORTHO05D006904 8.0e-24 114.4 148 48.0
Lalb_Chr05g0222141 Lupinus albus HOM05D004684 ORTHO05D006904 1.0e-23 114.0 153 46.4
ATR0787G095 Amborella trichopoda HOM05D004684 ORTHO05D006904 1.4e-23 113.6 148 48.6
Aqoxy5G00132 Aquilegia oxysepala HOM05D004684 ORTHO05D006904 1.4e-23 113.6 150 46.7
Os11g0544800 Oryza sativa ssp. japonica HOM05D004684 ORTHO05D006904 3.0e-23 112.5 150 48.0
Zm00001eb197630 Zea mays HOM05D004684 ORTHO05D006904 1.5e-22 110.2 147 48.3
CDE02G2675 Ceratophyllum demersum HOM05D004684 ORTHO05D006904 1.3e-21 107.1 151 44.4
Lj3A639G13 Lonicera japonica HOM05D004684 ORTHO05D006904 1.3e-21 107.1 179 40.8
unitig_748.g8291 Utricularia gibba HOM05D004684 ORTHO05D006904 4.8e-21 105.1 148 45.3
Hund24872 Selenicereus undatus HOM05D004684 ORTHO05D006904 1.4e-20 103.6 213 36.6
Mapoly0107s0036 Marchantia polymorpha HOM05D004684 ORTHO05D006904 3.1e-20 102.4 147 46.3
AagrBONN_evm.TU.Sc2ySwM_368.913 Anthoceros agrestis HOM05D004684 ORTHO05D006904 9.1e-20 100.9 147 43.5
SMO273G0058 Selaginella moellendorffii HOM05D004684 ORTHO05D006904 9.1e-20 100.9 146 43.8
SMO147G0416 Selaginella moellendorffii HOM05D004684 ORTHO05D006904 1.2e-19 100.5 148 45.3
CBR_g20386 Chara braunii HOM05D004684 ORTHO05D006904 3.8e-18 95.5 148 42.6
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 6.5e-18 94.7 149 44.3
BcaC06g35681 Brassica carinata HOM05D004684 ORTHO05D008836 1.9e-17 93.2 43 100.0
GSVIVG01027938001 Vitis vinifera HOM05D004684 ORTHO05D006904 2.8e-16 89.4 89 58.4
MD13G1223700 Malus domestica HOM05D004684 ORTHO05D006904 6.1e-16 88.2 92 56.5
Lsat_1_v5_gn_1_75460 Lactuca sativa HOM05D004684 ORTHO05D006904 2.3e-15 86.3 151 41.7
BolC7t41675H Brassica oleracea HOM05D004684 ORTHO05D027888 1.2e-14 84.0 70 71.4
HPP92_005111 Vanilla planifolia HOM05D004684 ORTHO05D006904 2.0e-14 83.2 87 52.9
CAN.G812.19 Capsicum annuum HOM05D004684 ORTHO05D006904 4.4e-14 82.0 89 52.8
Cc01_g12830 Coffea canephora HOM05D004684 ORTHO05D006904 1.7e-13 80.1 92 52.2
Cc03_g06440 Coffea canephora HOM05D004684 ORTHO05D006904 1.7e-13 80.1 92 52.2
Nitab4.5_0022682g0010 Nicotiana tabacum HOM05D004684 ORTHO05D006904 2.2e-13 79.7 89 51.7
Oeu059392.1 Olea europaea HOM05D004684 ORTHO05D006904 6.3e-13 78.2 93 48.4
Nitab4.5_0001041g0120 Nicotiana tabacum HOM05D004684 ORTHO05D006904 8.3e-13 77.8 138 39.1
Duzib151G0232 Durio zibethinus HOM05D004684 ORTHO05D006904 7.0e-12 74.7 138 37.0
PSO832G1147 Papaver somniferum HOM05D004684 ORTHO05D006904 7.0e-12 74.7 88 51.1
PRCOL_00005018 Prasinoderma coloniale HOM05D004684 ORTHO05D006904 2.0e-11 73.2 150 38.0
SEGI_18338 Sequoiadendron giganteum HOM05D004684 ORTHO05D006904 5.9e-11 71.6 88 50.0
Rhsim02G0163300 Rhododendron simsii HOM05D004684 ORTHO05D006904 2.3e-10 69.7 95 42.1
MCO15G005 Micromonas commoda HOM05D004684 ORTHO05D006904 1.9e-09 66.6 103 39.8
AUR62020515 Chenopodium quinoa HOM05D000462 ORTHO05D005846 3.0e-07 59.3 78 43.6
Oeu059393.1 Olea europaea HOM05D004684 ORTHO05D029065 5.2e-07 58.5 78 46.2
FAN12G2037 Fragaria x ananassa HOM05D004684 ORTHO05D006904 1.2e-06 57.4 36 69.4
arahy.Tifrunner.gnm1.ann1.FY8GKD Arachis hypogaea HOM05D003831 ORTHO05D004440 1.5e-06 57.0 36 72.2
CAN.G154.7 Capsicum annuum HOM05D004684 ORTHO05D010951 1.5e-06 57.0 37 67.6
Pp3s32_289 Physcomitrium patens HOM05D004684 ORTHO05D006904 5.8e-06 55.1 155 29.7


User provided reference genes

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