Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p11540 Brassica napus HOM05D001076 ORTHO05D001603 3.9e-67 258.1 136 100.0
A09p43430 Brassica napus HOM05D001076 ORTHO05D001603 2.1e-60 235.7 127 98.4
C04p04360 Brassica napus HOM05D001076 ORTHO05D001603 2.1e-60 235.7 127 98.4
A01p02820 Brassica napus HOM05D001076 ORTHO05D001603 2.3e-51 205.7 127 87.4
BraA01t00265Z Brassica rapa HOM05D001076 ORTHO05D001603 6.6e-51 204.1 127 88.2
Sp7g33670 Schrenkiella parvula HOM05D001076 ORTHO05D001603 1.9e-37 159.5 131 67.9
BcaNung04884 Brassica carinata HOM05D001076 ORTHO05D001603 9.3e-37 157.1 133 75.9
Thhalv10024905m.g Eutrema salsugineum HOM05D001076 ORTHO05D001603 5.1e-35 151.4 130 68.5
BcaNung00785 Brassica carinata HOM05D001112 ORTHO05D000996 2.8e-33 145.6 139 67.6
C07p61390 Brassica napus HOM05D001076 ORTHO05D001603 3.7e-33 145.2 133 66.9
BolC7t46565H Brassica oleracea HOM05D001076 ORTHO05D001603 6.2e-33 144.4 133 66.9
A03p63920 Brassica napus HOM05D001076 ORTHO05D001603 2.4e-32 142.5 129 65.9
BraA03t15461Z Brassica rapa HOM05D001076 ORTHO05D001603 2.4e-32 142.5 129 65.9
AL7G15160 Arabidopsis lyrata HOM05D001076 ORTHO05D001603 3.1e-32 142.1 110 70.0
CARHR244280 Cardamine hirsuta HOM05D001076 ORTHO05D001603 3.4e-31 138.7 131 62.6
Carub.0007s0434 Capsella rubella HOM05D001076 ORTHO05D001603 1.0e-30 137.1 131 60.3
AT4G35890 Arabidopsis thaliana HOM05D001076 ORTHO05D001603 3.8e-30 135.2 127 63.0
C01p03150 Brassica napus HOM05D001076 ORTHO05D001603 2.7e-28 129.0 139 62.6
BolC1t00300H Brassica oleracea HOM05D001076 ORTHO05D001603 2.7e-28 129.0 139 62.6
BcaNung05056 Brassica carinata HOM05D001076 ORTHO05D001603 6.0e-28 127.9 133 60.9
A09p68970 Brassica napus HOM05D001076 ORTHO05D001603 4.3e-26 121.7 58 98.3
C05p19700 Brassica napus HOM05D001076 ORTHO05D001603 5.7e-26 121.3 57 100.0
Aa31LG6G12840 Aethionema arabicum HOM05D001076 ORTHO05D001603 1.3e-22 110.2 129 54.3
A02p42160 Brassica napus HOM05D001076 ORTHO05D001603 1.8e-19 99.8 52 96.2
BcaB03g12431 Brassica carinata HOM05D001076 ORTHO05D001603 6.7e-19 97.8 133 57.1
BcaC01g00526 Brassica carinata HOM05D001076 ORTHO05D001603 1.1e-16 90.5 131 56.5
BolC3t20355H Brassica oleracea HOM05D001076 ORTHO05D001603 1.1e-16 90.5 131 56.5
THA.LOC104819738 Tarenaya hassleriana HOM05D001076 ORTHO05D001603 1.5e-15 86.7 133 53.4
A08p21620 Brassica napus HOM05D001076 ORTHO05D001603 2.2e-14 82.8 129 55.0
BraA08t34109Z Brassica rapa HOM05D001076 ORTHO05D001603 2.2e-14 82.8 129 55.0
C03p80960 Brassica napus HOM05D001076 ORTHO05D001603 5.0e-14 81.6 129 53.5
Duzib264G0858 Durio zibethinus HOM05D001076 ORTHO05D001603 3.9e-11 72.0 141 39.0
Atru.chr3.882 Acer truncatum HOM05D001076 ORTHO05D001603 7.4e-10 67.8 145 37.2
Atru.chr3.893 Acer truncatum HOM05D001076 ORTHO05D001603 7.4e-10 67.8 145 37.2
Ciclev10025634m.g Citrus clementina HOM05D001076 ORTHO05D001603 1.1e-08 63.9 110 47.3
MD02G1125000 Malus domestica HOM05D001076 ORTHO05D001603 1.4e-08 63.5 111 41.4
Haze_03714 Corylus avellana HOM05D001076 ORTHO05D001603 1.8e-08 63.2 143 39.9
Cfa007017 Carpinus fangiana HOM05D001076 ORTHO05D001603 9.1e-08 60.8 143 39.9
Thecc.01G013200 Theobroma cacao HOM05D001076 ORTHO05D001603 2.0e-07 59.7 125 36.0
MD15G1240700 Malus domestica HOM05D001076 ORTHO05D001603 2.6e-07 59.3 94 41.5
CiPaw.07G061900 Carya illinoinensis HOM05D001076 ORTHO05D001603 4.5e-07 58.5 116 34.5
CANSAT01G3132 Cannabis sativa HOM05D001076 ORTHO05D001603 5.9e-07 58.2 104 41.3
QL06p051361 Quercus lobata HOM05D001076 ORTHO05D001603 6.5e-06 54.7 109 34.9


User provided reference genes

Program Settings