Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p11460 Brassica napus HOM05D000003 ORTHO05D040554 2.4e-33 144.8 69 100.0
BolC7t41622H Brassica oleracea HOM05D000003 ORTHO05D040554 2.4e-33 144.8 69 100.0
BcaC06g35739 Brassica carinata HOM05D000003 ORTHO05D027234 6.2e-21 103.6 49 100.0
BcaB05g22894 Brassica carinata HOM05D000003 ORTHO05D001498 3.1e-12 74.7 48 66.7
A03p62850 Brassica napus HOM05D000003 ORTHO05D001498 3.1e-12 74.7 48 64.6
BraA01t02966Z Brassica rapa HOM05D000003 ORTHO05D014927 3.1e-12 74.7 48 64.6
BcaC06g35337 Brassica carinata HOM05D000003 ORTHO05D000006 2.0e-11 72.0 48 64.6
BcaC06g34794 Brassica carinata HOM05D000003 ORTHO05D001498 3.8e-10 67.8 48 62.5
C07p24620 Brassica napus HOM05D000003 ORTHO05D001498 3.8e-10 67.8 48 62.5
BolC7t42982H Brassica oleracea HOM05D000003 ORTHO05D001498 3.8e-10 67.8 48 62.5
BolC4t23645H Brassica oleracea HOM05D000003 ORTHO05D001498 7.1e-09 63.5 41 63.4
BolC8t47955H Brassica oleracea HOM05D000003 ORTHO05D001498 9.3e-09 63.2 47 59.6
BraA10t42905Z Brassica rapa HOM05D000003 ORTHO05D001498 9.3e-09 63.2 49 57.1
C08p04970 Brassica napus HOM05D009133 ORTHO05D019978 2.1e-08 62.0 48 52.1
BraA06t25211Z Brassica rapa HOM05D000003 ORTHO05D001498 4.6e-08 60.8 48 50.0
BcaC03g14554 Brassica carinata HOM05D000003 ORTHO05D014927 6.0e-08 60.5 49 51.0
C02p20030 Brassica napus HOM05D000003 ORTHO05D014927 6.0e-08 60.5 49 51.0
BcaC09g50587 Brassica carinata HOM05D000003 ORTHO05D001498 7.9e-08 60.1 48 50.0
C06p00940 Brassica napus HOM05D009133 ORTHO05D019978 7.9e-08 60.1 48 50.0
BolC6t35313H Brassica oleracea HOM05D000003 ORTHO05D001498 7.9e-08 60.1 48 50.0
A08p06880 Brassica napus HOM05D000003 ORTHO05D000004 1.8e-07 58.9 48 50.0
C04p68880 Brassica napus HOM05D000003 ORTHO05D014927 1.8e-07 58.9 49 53.1
BraA08t32705Z Brassica rapa HOM05D000003 ORTHO05D000004 1.8e-07 58.9 48 50.0
BcaC09g49335 Brassica carinata HOM05D000003 ORTHO05D001498 2.3e-07 58.5 47 55.3
BcaC06g35891 Brassica carinata HOM05D000003 ORTHO05D001498 3.0e-07 58.2 48 47.9
BolC7t41443H Brassica oleracea HOM05D000003 ORTHO05D000004 3.0e-07 58.2 48 47.9
BcaC06g36398 Brassica carinata HOM05D000003 ORTHO05D014927 3.9e-07 57.8 48 47.9
C07p04560 Brassica napus HOM05D000003 ORTHO05D014927 3.9e-07 57.8 48 47.9
BcaC08g45914 Brassica carinata HOM05D000003 ORTHO05D001498 8.7e-07 56.6 46 54.3
C04p24260 Brassica napus HOM05D000003 ORTHO05D014927 1.5e-06 55.8 48 47.9
BolC4t23924H Brassica oleracea HOM05D000003 ORTHO05D014927 1.5e-06 55.8 48 47.9
BcaNung01834 Brassica carinata HOM05D000003 ORTHO05D023979 1.9e-06 55.5 46 52.2
BcaB02g11015 Brassica carinata HOM05D000003 ORTHO05D000004 3.3e-06 54.7 50 46.0
BcaC09g49748 Brassica carinata HOM05D000003 ORTHO05D019978 3.3e-06 54.7 48 50.0
BolC4t22151H Brassica oleracea HOM05D000914 ORTHO05D000718 5.6e-06 53.9 42 59.5
BcaC09g48852 Brassica carinata HOM05D000003 ORTHO05D001498 9.6e-06 53.1 46 50.0
BolC1t04496H Brassica oleracea HOM05D000003 ORTHO05D023979 9.6e-06 53.1 46 50.0


User provided reference genes

Program Settings