Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p10930 Brassica napus HOM05D006799 ORTHO05D008391 3.3e-104 381.7 192 100.0
BolC7t41559H Brassica oleracea HOM05D006799 ORTHO05D008391 7.3e-104 380.6 192 99.5
BcaC06g35782 Brassica carinata HOM05D006799 ORTHO05D008391 6.8e-102 374.0 192 99.0
A07p07240 Brassica napus HOM05D006799 ORTHO05D008391 9.2e-99 363.6 192 95.3
BraA07t28510Z Brassica rapa HOM05D006799 ORTHO05D008391 1.3e-97 359.8 192 94.8
Sp3g22710 Schrenkiella parvula HOM05D006799 ORTHO05D008391 2.4e-86 322.4 192 83.9
BcaB06g26722 Brassica carinata HOM05D006799 ORTHO05D008391 2.6e-85 318.9 192 86.5
CARHR101440 Cardamine hirsuta HOM05D006799 ORTHO05D008391 2.8e-79 298.9 192 79.7
Thhalv10002682m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 1.4e-78 296.6 192 79.2
AL3G40810 Arabidopsis lyrata HOM05D006799 ORTHO05D008391 1.9e-75 286.2 190 76.8
Carub.0003s2545 Capsella rubella HOM05D006799 ORTHO05D008391 7.1e-75 284.3 193 74.6
AT3G25120 Arabidopsis thaliana HOM05D006799 ORTHO05D008391 3.3e-72 275.4 190 74.2
THA.LOC104804623 Tarenaya hassleriana HOM05D006799 ORTHO05D008391 8.4e-68 260.8 198 68.7
Aa31LG9G5010 Aethionema arabicum HOM05D006799 ORTHO05D008391 7.1e-67 257.7 196 67.9
CARHR218390 Cardamine hirsuta HOM05D006799 ORTHO05D008391 7.9e-58 227.6 180 65.0
C04p42860 Brassica napus HOM05D006799 ORTHO05D008391 6.7e-57 224.6 192 63.5
A04p08990 Brassica napus HOM05D006799 ORTHO05D008391 8.8e-57 224.2 192 63.5
BraA04t16594Z Brassica rapa HOM05D006799 ORTHO05D008391 8.8e-57 224.2 192 63.5
BcaB03g16157 Brassica carinata HOM05D006799 ORTHO05D008391 1.1e-56 223.8 192 63.0
BcaC02g09450 Brassica carinata HOM05D006799 ORTHO05D008391 2.5e-56 222.6 192 63.0
BolC4t25853H Brassica oleracea HOM05D006799 ORTHO05D008391 2.8e-55 219.2 192 62.5
Cpa.g.sc21.107 Carica papaya HOM05D006799 ORTHO05D008391 3.3e-48 195.7 165 60.0
Thhalv10026882m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 3.3e-48 195.7 193 60.1
COL.COLO4_15616 Corchorus olitorius HOM05D006799 ORTHO05D008391 6.3e-47 191.4 171 57.9
Dinv12648 Davidia involucrata HOM05D006799 ORTHO05D008391 2.4e-46 189.5 190 54.7
Eucgr.K02137 Eucalyptus grandis HOM05D006799 ORTHO05D008391 1.2e-45 187.2 164 59.1
DCAR_012670 Daucus carota HOM05D006799 ORTHO05D008391 2.0e-45 186.4 166 58.4
PGR044G2699 Punica granatum HOM05D006799 ORTHO05D008391 3.4e-45 185.7 207 50.7
Potri.002G246000 Populus trichocarpa HOM05D006799 ORTHO05D008391 5.9e-45 184.9 174 55.2
Thecc.01G219900 Theobroma cacao HOM05D006799 ORTHO05D008391 5.9e-45 184.9 170 57.1
Sabra02G0187300 Salix brachista HOM05D006799 ORTHO05D008391 7.7e-45 184.5 196 52.6
Atru.chr6.1426 Acer truncatum HOM05D006799 ORTHO05D008391 2.2e-44 183.0 198 53.5
Hma1.2p1_0226F.1_g095380 Hydrangea macrophylla HOM05D006799 ORTHO05D008391 2.9e-44 182.6 178 56.2
Manes.13G049500 Manihot esculenta HOM05D006799 ORTHO05D008391 6.5e-44 181.4 190 51.6
MSTRG.17994 Avicennia marina HOM05D006799 ORTHO05D008391 8.5e-44 181.0 176 56.8
TAR362G0955 Trochodendron aralioides HOM05D006799 ORTHO05D008391 8.5e-44 181.0 178 53.4
Ciclev10022385m.g Citrus clementina HOM05D006799 ORTHO05D008391 1.4e-43 180.3 200 49.5
QL09p051225 Quercus lobata HOM05D006799 ORTHO05D008391 1.4e-43 180.3 204 50.0
Actinidia23709 Actinidia chinensis HOM05D006799 ORTHO05D008391 1.9e-43 179.9 189 53.4
Sed0008494 Sechium edule HOM05D006799 ORTHO05D008391 3.2e-43 179.1 169 53.3
ClCG09G008610 Citrullus lanatus HOM05D006799 ORTHO05D008391 4.2e-43 178.7 169 53.8
Gorai.001G105200 Gossypium raimondii HOM05D006799 ORTHO05D008391 5.5e-43 178.3 188 53.7
Gohir.D07G097800 Gossypium hirsutum HOM05D006799 ORTHO05D008391 7.2e-43 177.9 188 53.7
Sc17g0002120 Simmondsia chinensis HOM05D006799 ORTHO05D008391 1.2e-42 177.2 178 53.9
TWI18G0944 Tripterygium wilfordii HOM05D006799 ORTHO05D008391 1.6e-42 176.8 194 51.0
CANSAT01G3095 Cannabis sativa HOM05D006799 ORTHO05D008391 2.1e-42 176.4 173 54.3
CsaV3_7G026360 Cucumis sativus L. HOM05D006799 ORTHO05D008391 2.1e-42 176.4 169 52.7
GSVIVG01003251001 Vitis vinifera HOM05D006799 ORTHO05D008391 2.1e-42 176.4 171 55.0
Gohir.A07G093200 Gossypium hirsutum HOM05D006799 ORTHO05D008391 2.7e-42 176.0 188 53.2
Peaxi162Scf00068g02310 Petunia axillaris HOM05D006799 ORTHO05D008391 4.7e-42 175.3 185 53.5
Hund05578 Selenicereus undatus HOM05D006799 ORTHO05D008391 4.7e-42 175.3 185 51.4
SGA_v2.0_scaffold6G03220 Striga asiatica HOM05D006799 ORTHO05D008391 8.0e-42 174.5 167 58.1
MBI11_g07417_MAGBIO Magnolia biondii HOM05D006799 ORTHO05D008391 1.0e-41 174.1 176 52.3
Duzib138G1661 Durio zibethinus HOM05D006799 ORTHO05D008391 1.4e-41 173.7 169 57.4
CiPaw.02G023800 Carya illinoinensis HOM05D006799 ORTHO05D008391 2.3e-41 172.9 176 50.6
Nitab4.5_0000045g0540 Nicotiana tabacum HOM05D006799 ORTHO05D008391 2.3e-41 172.9 171 56.7
Nitab4.5_0002641g0110 Nicotiana tabacum HOM05D006799 ORTHO05D008391 2.3e-41 172.9 178 53.4
CAN.G181.54 Capsicum annuum HOM05D006799 ORTHO05D008391 3.0e-41 172.6 168 55.4
Cc01_g16700 Coffea canephora HOM05D006799 ORTHO05D008391 3.0e-41 172.6 193 51.8
CSS0002557 Camellia sinensis var. sinensis HOM05D006799 ORTHO05D008391 3.9e-41 172.2 177 52.5
EL10Ac5g12475 Beta vulgaris HOM05D006799 ORTHO05D008391 5.2e-41 171.8 165 53.3
Haze_15251 Corylus avellana HOM05D006799 ORTHO05D008391 5.2e-41 171.8 200 47.5
Sopen06g002680 Solanum pennellii HOM05D006799 ORTHO05D008391 6.7e-41 171.4 168 56.0
Migut.N00632 Erythranthe guttata HOM05D006799 ORTHO05D008391 1.1e-40 170.6 188 49.5
Solyc06g007800.4 Solanum lycopersicum HOM05D006799 ORTHO05D008391 1.1e-40 170.6 168 56.0
Lj1C89G17 Lonicera japonica HOM05D006799 ORTHO05D008391 1.5e-40 170.2 167 52.7
Rhsim01G0253200 Rhododendron simsii HOM05D006799 ORTHO05D008391 1.5e-40 170.2 177 54.8
MELO3C021082.2 Cucumis melo HOM05D006799 ORTHO05D008391 2.0e-40 169.9 178 50.0
SalBow3G4070 Salvia bowleyana HOM05D006799 ORTHO05D008391 2.0e-40 169.9 198 50.0
PGSC0003DMG400022033 Solanum tuberosum HOM05D006799 ORTHO05D008391 2.6e-40 169.5 174 54.6
FAN24G0472 Fragaria x ananassa HOM05D004056 ORTHO05D008391 5.7e-40 168.3 206 45.6
MD10G1159700 Malus domestica HOM05D006799 ORTHO05D008391 7.4e-40 167.9 207 46.4
Prupe.8G198800 Prunus persica HOM05D006799 ORTHO05D008391 9.7e-40 167.5 205 45.9
FAN15G2777 Fragaria x ananassa HOM05D004056 ORTHO05D008391 1.3e-39 167.2 206 45.6
RcHm_v2.0_Chr6g0284091 Rosa chinensis HOM05D006799 ORTHO05D008391 1.3e-39 167.2 206 45.1
FvH4_2g18530 Fragaria vesca HOM05D006799 ORTHO05D008391 2.8e-39 166.0 206 45.1
VMungo0331G1591 Vigna mungo HOM05D006799 ORTHO05D008391 3.7e-39 165.6 201 48.8
MD05G1171500 Malus domestica HOM05D006799 ORTHO05D008391 4.8e-39 165.2 207 45.9
arahy.Tifrunner.gnm1.ann1.AR5NL3 Arachis hypogaea HOM05D006799 ORTHO05D008391 6.3e-39 164.9 196 50.0
Glyma.17G151300 Glycine max HOM05D006799 ORTHO05D008391 3.1e-38 162.5 174 51.7
Nitab4.5_0002616g0150 Nicotiana tabacum HOM05D006799 ORTHO05D008391 3.1e-38 162.5 201 47.3
Dinv19171 Davidia involucrata HOM05D006799 ORTHO05D008391 4.1e-38 162.2 155 57.4
arahy.Tifrunner.gnm1.ann1.H272JM Arachis hypogaea HOM05D006799 ORTHO05D008391 5.3e-38 161.8 196 49.0
Aqoxy5G00028 Aquilegia oxysepala HOM05D006799 ORTHO05D008391 7.0e-38 161.4 174 48.9
Lj3g0009647 Lotus japonicus HOM05D006799 ORTHO05D008391 1.2e-37 160.6 187 48.1
PSO063G5306 Papaver somniferum HOM05D006799 ORTHO05D008391 2.6e-37 159.5 179 48.6
Phvul.010G021800 Phaseolus vulgaris HOM05D006799 ORTHO05D008391 2.6e-37 159.5 197 47.7
Psat4g203520 Pisum sativum HOM05D006799 ORTHO05D008391 3.5e-37 159.1 187 48.7
Cfa004160 Carpinus fangiana HOM05D006799 ORTHO05D008391 4.5e-37 158.7 166 50.6
CDE05G2155 Ceratophyllum demersum HOM05D006799 ORTHO05D008391 4.5e-37 158.7 177 48.0
TPR.G11194 Trifolium pratense HOM05D006799 ORTHO05D008391 7.7e-37 157.9 174 49.4
unitig_0.g374 Utricularia gibba HOM05D006799 ORTHO05D008391 7.7e-37 157.9 180 50.6
vmacro14734 Vaccinium macrocarpon HOM05D006799 ORTHO05D008391 7.7e-37 157.9 225 43.6
Os04g0376100 Oryza sativa ssp. japonica HOM05D006799 ORTHO05D008391 3.8e-36 155.6 194 46.9
Lalb_Chr12g0209871 Lupinus albus HOM05D006799 ORTHO05D008391 5.0e-36 155.2 188 48.4
AUR62019885 Chenopodium quinoa HOM05D006799 ORTHO05D008391 6.5e-36 154.8 178 45.5
AUR62007023 Chenopodium quinoa HOM05D006799 ORTHO05D008391 1.1e-35 154.1 200 43.0
Medtr8g012725 Medicago truncatula HOM05D006799 ORTHO05D008391 1.1e-35 154.1 166 50.6
Zm00001eb086040 Zea mays HOM05D006799 ORTHO05D008391 3.6e-34 149.1 161 50.9
Lsat_1_v5_gn_8_89340 Lactuca sativa HOM05D006799 ORTHO05D008391 4.7e-34 148.7 171 49.1
Ah.12g052960 Amaranthus hybridus HOM05D006799 ORTHO05D008391 2.6e-32 142.9 180 44.4
Ca_23225_v3 Cicer arietinum L. HOM05D006799 ORTHO05D008391 1.3e-31 140.6 164 46.3
ECA236G1739 Erigeron canadensis HOM05D006799 ORTHO05D008391 1.3e-31 140.6 173 46.8
ATR0561G177 Amborella trichopoda HOM05D006799 ORTHO05D008391 4.8e-31 138.7 176 44.3
HanXRQChr16g0500591 Helianthus annuus HOM05D006799 ORTHO05D008391 1.2e-29 134.0 172 43.6
Sc17g0002130 Simmondsia chinensis HOM05D006799 ORTHO05D008391 2.0e-24 116.7 96 62.5
Peaxi162Scf00372g01214 Petunia axillaris HOM05D006799 ORTHO05D008391 2.4e-22 109.8 119 51.3
SEGI_12663 Sequoiadendron giganteum HOM05D006799 ORTHO05D008391 1.6e-21 107.1 181 37.0
FAN27G1455 Fragaria x ananassa HOM05D006799 ORTHO05D008391 2.0e-21 106.7 127 46.5
arahy.Tifrunner.gnm1.ann1.9RT6YB Arachis hypogaea HOM05D006799 ORTHO05D008391 3.8e-20 102.4 105 52.4
Mapoly0010s0131 Marchantia polymorpha HOM05D006799 ORTHO05D008391 3.6e-18 95.9 175 36.0
AagrBONN_evm.TU.Sc2ySwM_228.181 Anthoceros agrestis HOM05D006799 ORTHO05D008391 2.2e-15 86.7 169 33.7
Pp3c22_13870 Physcomitrium patens HOM05D006799 ORTHO05D008391 3.5e-13 79.3 174 31.0
Rhsim01G0253100 Rhododendron simsii HOM05D006799 ORTHO05D008391 4.7e-10 68.9 92 47.8
CBR_g52029 Chara braunii HOM05D006799 ORTHO05D008391 8.0e-10 68.2 111 38.7


User provided reference genes

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