Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p10670 Brassica napus HOM05D009935 ORTHO05D012055 2.3e-174 615.5 334 100.0
BcaC06g35803 Brassica carinata HOM05D009935 ORTHO05D012055 7.2e-115 417.9 242 90.9
BolC7t41533H Brassica oleracea HOM05D009935 ORTHO05D012055 7.2e-115 417.9 242 90.9
BcaC06g34330 Brassica carinata HOM05D009935 ORTHO05D012055 1.6e-114 416.8 242 90.5
BolC7t43570H Brassica oleracea HOM05D009935 ORTHO05D012055 1.6e-114 416.8 242 90.5
A07p07080 Brassica napus HOM05D009935 ORTHO05D012055 6.1e-106 388.3 242 86.0
BraA07t28495Z Brassica rapa HOM05D009935 ORTHO05D012055 6.1e-106 388.3 242 86.0
BcaB06g26733 Brassica carinata HOM05D009935 ORTHO05D012055 7.7e-93 344.7 272 69.5
Sp5g28680 Schrenkiella parvula HOM05D009935 ORTHO05D012055 7.3e-43 178.7 231 51.9
A07p39410 Brassica napus HOM05D009935 ORTHO05D012055 3.6e-34 149.8 233 44.2
BraA07t31490Z Brassica rapa HOM05D009935 ORTHO05D012055 3.6e-34 149.8 236 44.1
BcaB06g26708 Brassica carinata HOM05D009935 ORTHO05D012055 1.8e-33 147.5 88 86.4
BcaC08g46770 Brassica carinata HOM05D009935 ORTHO05D012055 4.0e-33 146.4 230 42.2
C06p47650 Brassica napus HOM05D009935 ORTHO05D012055 2.6e-32 143.7 230 42.2
BolC6t39802H Brassica oleracea HOM05D009935 ORTHO05D012055 2.9e-31 140.2 233 40.8
Thhalv10019582m.g Eutrema salsugineum HOM05D009935 ORTHO05D012055 2.8e-26 123.6 199 42.2
C03p25990 Brassica napus HOM05D010948 ORTHO05D013805 4.9e-23 112.8 84 70.2
BcaC08g46769 Brassica carinata HOM05D009935 ORTHO05D012055 8.4e-23 112.1 85 65.9
AL2G33270 Arabidopsis lyrata HOM05D009935 ORTHO05D012055 3.9e-20 103.2 198 37.4
BcaB03g15059 Brassica carinata HOM05D009935 ORTHO05D012055 6.7e-20 102.4 211 38.4
BcaC01g00510 Brassica carinata HOM05D010948 ORTHO05D039443 1.2e-16 91.7 84 59.5
C03p80810 Brassica napus HOM05D010948 ORTHO05D039443 1.2e-16 91.7 84 59.5
A03p59560 Brassica napus HOM05D010948 ORTHO05D013805 1.0e-15 88.6 84 60.7
A07p28660 Brassica napus HOM05D010948 ORTHO05D013805 1.0e-15 88.6 84 60.7
Carub.0002s2024 Capsella rubella HOM05D009935 ORTHO05D012055 4.2e-14 83.2 248 32.3
Carub.0002s2026 Capsella rubella HOM05D009935 ORTHO05D012055 1.6e-13 81.3 248 31.5
BcaB01g05924 Brassica carinata HOM05D010948 ORTHO05D013805 2.3e-12 77.4 84 54.8
C03p08410 Brassica napus HOM05D010948 ORTHO05D000169 3.9e-12 76.6 40 92.5
BcaB07g31310 Brassica carinata HOM05D029219 ORTHO05D091766 1.9e-11 74.3 55 69.1
BolC9t55422H Brassica oleracea HOM05D010948 ORTHO05D013805 7.4e-11 72.4 84 54.8
C08p35010 Brassica napus HOM05D009754 ORTHO05D033217 1.6e-10 71.2 55 60.0
C04p72720 Brassica napus HOM05D009754 ORTHO05D014123 1.4e-09 68.2 85 48.2
C05p02990 Brassica napus HOM05D009754 ORTHO05D101014 5.3e-09 66.2 85 47.1
C04p32520 Brassica napus HOM05D011556 ORTHO05D014123 6.9e-09 65.9 83 48.2
BolC2t10052H Brassica oleracea HOM05D011556 ORTHO05D014123 1.2e-08 65.1 55 61.8
A09p03830 Brassica napus HOM05D011556 ORTHO05D014123 2.0e-08 64.3 55 58.2
BcaC06g32745 Brassica carinata HOM05D009754 ORTHO05D020043 2.6e-08 63.9 51 64.7
C08p42710 Brassica napus HOM05D011556 ORTHO05D014123 2.6e-08 63.9 55 58.2
C08p49870 Brassica napus HOM05D011556 ORTHO05D041066 2.6e-08 63.9 55 58.2
C02p29070 Brassica napus HOM05D009754 ORTHO05D020043 4.5e-08 63.2 51 64.7
BraA10t43860Z Brassica rapa HOM05D009754 ORTHO05D020043 4.5e-08 63.2 51 64.7
C07p15790 Brassica napus HOM05D011556 ORTHO05D014123 5.9e-08 62.8 55 56.4
C02p10230 Brassica napus HOM05D011556 ORTHO05D014123 7.7e-08 62.4 55 56.4
BcaC07g38101 Brassica carinata HOM05D009754 ORTHO05D027209 1.3e-07 61.6 51 62.7
BraA02t06231Z Brassica rapa HOM05D011556 ORTHO05D014123 1.3e-07 61.6 55 54.5
BraA08t34184Z Brassica rapa HOM05D009754 ORTHO05D020043 1.3e-07 61.6 51 62.7
BolC8t52515H Brassica oleracea HOM05D011556 ORTHO05D041066 1.7e-07 61.2 55 56.4
C02p63430 Brassica napus HOM05D014255 ORTHO05D015450 2.2e-07 60.8 55 58.2
BolC2t12410H Brassica oleracea HOM05D014255 ORTHO05D015450 2.2e-07 60.8 55 58.2
Sp5g21110 Schrenkiella parvula HOM05D009935 ORTHO05D012055 2.2e-07 60.8 96 38.5
C03p32540 Brassica napus HOM05D014255 ORTHO05D015450 2.9e-07 60.5 55 58.2
C03p51770 Brassica napus HOM05D010948 ORTHO05D013805 3.8e-07 60.1 62 56.5
BcaB07g33645 Brassica carinata HOM05D010893 ORTHO05D014123 5.0e-07 59.7 80 45.0
BraA08t34218Z Brassica rapa HOM05D010893 ORTHO05D016035 5.0e-07 59.7 51 60.8
BcaB01g05158 Brassica carinata HOM05D010893 ORTHO05D016035 1.1e-06 58.5 51 58.8
C08p07080 Brassica napus HOM05D010893 ORTHO05D016035 1.4e-06 58.2 51 58.8
BolC8t47552H Brassica oleracea HOM05D010893 ORTHO05D016035 1.4e-06 58.2 51 58.8
C03p09920 Brassica napus HOM05D010893 ORTHO05D016035 1.9e-06 57.8 50 60.0
BolC2t06272H Brassica oleracea HOM05D011556 ORTHO05D014123 1.9e-06 57.8 55 52.7
BraA04t18895Z Brassica rapa HOM05D010893 ORTHO05D039094 1.9e-06 57.8 51 60.8
C06p44540 Brassica napus HOM05D009754 ORTHO05D027209 2.5e-06 57.4 51 58.8
BcaC04g18681 Brassica carinata HOM05D009754 ORTHO05D027209 7.2e-06 55.8 51 58.8
A01p00100 Brassica napus HOM05D010948 ORTHO05D013805 7.2e-06 55.8 58 56.9


User provided reference genes

Program Settings