Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p10210 Brassica napus HOM05D006735 ORTHO05D009558 8.8e-166 587.0 330 100.0
BolC7t41471H Brassica oleracea HOM05D006735 ORTHO05D009558 6.4e-132 474.6 404 74.5
C08p03780 Brassica napus HOM05D006735 ORTHO05D009558 1.1e-104 384.0 325 66.5
BolC3t19829H Brassica oleracea HOM05D006735 ORTHO05D009558 3.7e-103 379.0 255 88.6
C07p37620 Brassica napus HOM05D006735 ORTHO05D010262 4.0e-94 349.0 256 73.4
BolC8t49602H Brassica oleracea HOM05D006735 ORTHO05D009558 2.7e-82 309.7 196 94.9
C06p27010 Brassica napus HOM05D006735 ORTHO05D009558 1.8e-78 297.0 170 84.7
BcaC04g18966 Brassica carinata HOM05D006735 ORTHO05D009558 5.3e-78 295.4 230 66.5
BolC4t22522H Brassica oleracea HOM05D006735 ORTHO05D009558 2.0e-69 266.9 139 95.0
BcaC01g02992 Brassica carinata HOM05D006735 ORTHO05D009558 1.7e-68 263.8 187 87.7
BolC8t50679H Brassica oleracea HOM05D006735 ORTHO05D009558 1.4e-57 227.6 196 74.0
BolC2t07759H Brassica oleracea HOM05D006735 ORTHO05D009558 8.8e-57 224.9 251 60.6
BraA05t22472Z Brassica rapa HOM05D006735 ORTHO05D009558 7.7e-53 211.8 162 70.4
BraA10t42960Z Brassica rapa HOM05D006735 ORTHO05D009558 1.8e-41 174.1 89 92.1
BcaC02g08079 Brassica carinata HOM05D006735 ORTHO05D009558 9.8e-40 168.3 105 76.2
A07p01920 Brassica napus HOM05D006735 ORTHO05D009558 3.7e-39 166.4 149 57.0
BraA06t25399Z Brassica rapa HOM05D006735 ORTHO05D009558 1.0e-36 158.3 142 76.8
BcaB04g16973 Brassica carinata HOM05D006735 ORTHO05D009558 1.2e-34 151.4 137 56.2
A09p18970 Brassica napus HOM05D006735 ORTHO05D009558 8.9e-33 145.2 168 56.0
C09p55340 Brassica napus HOM05D006735 ORTHO05D009558 2.6e-32 143.7 121 71.1
BolC8t47857H Brassica oleracea HOM05D006735 ORTHO05D009558 1.9e-30 137.5 110 70.9
BcaC07g38146 Brassica carinata HOM05D006735 ORTHO05D009558 1.2e-29 134.8 163 43.6
BcaC09g51945 Brassica carinata HOM05D006735 ORTHO05D009558 1.6e-29 134.4 162 42.6
A09p42550 Brassica napus HOM05D006735 ORTHO05D009558 1.6e-29 134.4 163 43.6
BcaC03g15864 Brassica carinata HOM05D006735 ORTHO05D009558 4.6e-29 132.9 162 42.6
BcaC08g45821 Brassica carinata HOM05D006735 ORTHO05D009558 6.0e-29 132.5 162 42.0
BcaC09g51566 Brassica carinata HOM05D006735 ORTHO05D009558 2.3e-28 130.6 162 42.0
C08p11240 Brassica napus HOM05D006735 ORTHO05D009558 3.9e-28 129.8 163 43.6
BcaC04g20691 Brassica carinata HOM05D006735 ORTHO05D009558 6.6e-28 129.0 163 42.3
BolC5t31791H Brassica oleracea HOM05D006735 ORTHO05D009558 6.6e-28 129.0 128 50.0
BcaC01g00870 Brassica carinata HOM05D006735 ORTHO05D009558 2.5e-27 127.1 163 43.6
A01p26730 Brassica napus HOM05D006735 ORTHO05D009558 1.6e-26 124.4 162 40.7
C08p05750 Brassica napus HOM05D006735 ORTHO05D009558 2.1e-26 124.0 108 62.0
A07p02010 Brassica napus HOM05D006735 ORTHO05D009558 1.5e-24 117.9 143 41.3
BcaB01g02897 Brassica carinata HOM05D006735 ORTHO05D009558 3.4e-24 116.7 154 40.9
C04p61000 Brassica napus HOM05D006735 ORTHO05D009558 2.9e-23 113.6 136 43.4
BcaC01g03559 Brassica carinata HOM05D006735 ORTHO05D009558 8.3e-23 112.1 154 39.6
C03p60980 Brassica napus HOM05D006735 ORTHO05D009558 1.9e-22 110.9 166 36.7
C09p40570 Brassica napus HOM05D006735 ORTHO05D009558 1.6e-21 107.8 136 42.6
BcaC09g48693 Brassica carinata HOM05D006735 ORTHO05D009558 4.6e-21 106.3 162 38.3
BcaC03g18043 Brassica carinata HOM05D006735 ORTHO05D009558 6.0e-21 105.9 154 39.0
C05p42930 Brassica napus HOM05D006735 ORTHO05D009558 7.8e-21 105.5 101 50.5
BolC5t33020H Brassica oleracea HOM05D006735 ORTHO05D009558 7.8e-21 105.5 101 50.5
A05p40380 Brassica napus HOM05D006735 ORTHO05D009558 1.7e-20 104.4 103 48.5
BcaC08g43985 Brassica carinata HOM05D006735 ORTHO05D009558 8.6e-20 102.1 141 40.4
BraA02t07687Z Brassica rapa HOM05D006735 ORTHO05D009558 1.1e-19 101.7 103 48.5
BraA09t36761Z Brassica rapa HOM05D006735 ORTHO05D009558 1.5e-19 101.3 95 49.5
BraA10t43706Z Brassica rapa HOM05D006735 ORTHO05D009558 5.6e-19 99.4 95 48.4
C03p83880 Brassica napus HOM05D006735 ORTHO05D009558 7.3e-19 99.0 69 62.3
BcaC01g02272 Brassica carinata HOM05D006735 ORTHO05D009558 4.7e-18 96.3 154 37.0
BolC3t17400H Brassica oleracea HOM05D006735 ORTHO05D009558 6.2e-18 95.9 151 39.7
CARHR286360 Cardamine hirsuta HOM05D006735 ORTHO05D009558 8.1e-18 95.5 102 47.1
BcaC06g35047 Brassica carinata HOM05D006735 ORTHO05D009558 1.1e-17 95.1 64 81.2
BolC3t18997H Brassica oleracea HOM05D006735 ORTHO05D009558 1.2e-16 91.7 151 39.1
C09p40840 Brassica napus HOM05D006735 ORTHO05D009558 1.5e-16 91.3 116 42.2
BraA08t33034Z Brassica rapa HOM05D006735 ORTHO05D043212 2.4e-14 84.0 71 67.6
A08p25200 Brassica napus HOM05D006735 ORTHO05D009558 7.1e-14 82.4 95 43.2
C01p49020 Brassica napus HOM05D006735 ORTHO05D009558 7.1e-14 82.4 95 43.2
BolC8t48101H Brassica oleracea HOM05D006735 ORTHO05D043212 7.1e-14 82.4 66 71.2
BcaC01g01277 Brassica carinata HOM05D006735 ORTHO05D009558 2.1e-13 80.9 99 50.5
BolC2t09633H Brassica oleracea HOM05D006735 ORTHO05D009558 2.1e-13 80.9 95 43.2
C05p61030 Brassica napus HOM05D005371 ORTHO05D006863 3.5e-13 80.1 72 62.5
BolC5t34759H Brassica oleracea HOM05D005371 ORTHO05D006863 3.5e-13 80.1 72 62.5
C05p19810 Brassica napus HOM05D006735 ORTHO05D009558 6.0e-13 79.3 95 42.1
BcaC01g02745 Brassica carinata HOM05D006735 ORTHO05D009558 6.6e-12 75.9 99 36.4
BcaC03g17723 Brassica carinata HOM05D006735 ORTHO05D009558 1.1e-11 75.1 53 64.2
C04p69030 Brassica napus HOM05D006735 ORTHO05D009558 2.5e-11 73.9 76 48.7
BolC2t07818H Brassica oleracea HOM05D006735 ORTHO05D009558 3.3e-11 73.6 94 38.3
Ah.08g220620 Amaranthus hybridus HOM05D000876 ORTHO05D000285 7.3e-11 72.4 167 26.9
BolC9t55302H Brassica oleracea HOM05D006735 ORTHO05D009558 3.6e-10 70.1 69 49.3
Gorai.012G085300 Gossypium raimondii HOM05D000876 ORTHO05D000285 4.7e-10 69.7 164 31.7
QL05p031161 Quercus lobata HOM05D000034 ORTHO05D000037 8.1e-10 68.9 159 30.2
BolC9t53784H Brassica oleracea HOM05D010326 ORTHO05D012728 1.1e-09 68.6 166 25.9
C07p50820 Brassica napus HOM05D010326 ORTHO05D012728 1.8e-09 67.8 166 25.9
Gorai.006G093000 Gossypium raimondii HOM05D000876 ORTHO05D000285 5.2e-09 66.2 153 32.7
QL04p079613 Quercus lobata HOM05D000876 ORTHO05D000285 5.2e-09 66.2 159 29.6
Os12g0207200 Oryza sativa ssp. japonica HOM05D000876 ORTHO05D000285 1.2e-08 65.1 171 28.1
Zm00001eb217070 Zea mays HOM05D000876 ORTHO05D000285 1.2e-08 65.1 165 28.5
Hund14971 Selenicereus undatus HOM05D000876 ORTHO05D000285 2.6e-08 63.9 162 28.4
FvH4_1g10461 Fragaria vesca HOM05D000034 ORTHO05D000037 4.4e-08 63.2 162 28.4
C01p27580 Brassica napus HOM05D006735 ORTHO05D009558 5.8e-08 62.8 77 41.6
C02p38090 Brassica napus HOM05D006735 ORTHO05D009558 5.8e-08 62.8 77 41.6
C03p71260 Brassica napus HOM05D006735 ORTHO05D009558 5.8e-08 62.8 77 41.6
C06p04290 Brassica napus HOM05D006735 ORTHO05D009558 5.8e-08 62.8 77 41.6
BolC9t58189H Brassica oleracea HOM05D006735 ORTHO05D009558 1.3e-07 61.6 57 49.1
Atru.chr2.2393 Acer truncatum HOM05D000034 ORTHO05D000037 8.4e-07 58.9 167 25.1
CANSAT01G0041 Cannabis sativa HOM05D000876 ORTHO05D000285 8.4e-07 58.9 169 24.3
CiPaw.08G085800 Carya illinoinensis HOM05D000876 ORTHO05D000285 8.4e-07 58.9 169 27.8
BraA03t15421Z Brassica rapa HOM05D028599 ORTHO05D027333 1.4e-06 58.2 80 32.5
CANSAT78G1247 Cannabis sativa HOM05D000876 ORTHO05D000285 1.4e-06 58.2 169 24.9
C04p14090 Brassica napus HOM05D006735 ORTHO05D041910 1.9e-06 57.8 69 37.7
Gorai.003G031500 Gossypium raimondii HOM05D000876 ORTHO05D000285 2.4e-06 57.4 134 31.3
CSS0045263 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 4.2e-06 56.6 137 24.1
VMungo1383G2642 Vigna mungo HOM05D000665 ORTHO05D000285 4.2e-06 56.6 149 28.9
Atru.chr11.998 Acer truncatum HOM05D000876 ORTHO05D000285 9.3e-06 55.5 169 24.3
C03p85420 Brassica napus HOM05D006735 ORTHO05D009558 9.3e-06 55.5 68 45.6
Thhalv10002194m.g Eutrema salsugineum HOM05D006735 ORTHO05D011963 9.3e-06 55.5 53 58.5
Solyc12g039050.3 Solanum lycopersicum HOM05D000876 ORTHO05D000285 9.3e-06 55.5 167 26.3


User provided reference genes

Program Settings