Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p10010 Brassica napus HOM05D009948 ORTHO05D001651 1.1e-223 779.6 385 100.0
BolC3t20475H Brassica oleracea HOM05D009948 ORTHO05D001651 9.6e-164 580.5 393 78.4
C07p10000 Brassica napus HOM05D009948 ORTHO05D001651 1.1e-162 577.0 388 79.4
BNapus_Darmor_BZH_scaffold_82p00130 Brassica napus HOM05D009948 ORTHO05D001651 2.4e-162 575.9 392 78.6
BNapus_Darmor_BZH_scaffold_82p00140 Brassica napus HOM05D009948 ORTHO05D003614 2.9e-120 436.0 388 64.7
BcaC01g02199 Brassica carinata HOM05D009948 ORTHO05D001651 1.3e-80 304.3 232 71.6
BolSC21t60302H Brassica oleracea HOM05D009948 ORTHO05D001651 2.3e-80 303.5 242 70.2
BolC3t20474H Brassica oleracea HOM05D009948 ORTHO05D001651 2.0e-68 263.8 161 83.2
C08p06580 Brassica napus HOM05D009948 ORTHO05D001651 1.0e-64 251.5 276 55.8
BraA09t38760Z Brassica rapa HOM05D009948 ORTHO05D001651 1.5e-60 237.7 345 42.6
C01p01240 Brassica napus HOM05D009948 ORTHO05D001651 2.0e-60 237.3 132 92.4
BolC7t45823H Brassica oleracea HOM05D009948 ORTHO05D001651 2.6e-60 236.9 157 78.3
BolC9t56030H Brassica oleracea HOM05D009948 ORTHO05D003614 6.4e-59 232.3 396 38.6
Thhalv10005609m.g Eutrema salsugineum HOM05D000158 ORTHO05D003614 9.3e-50 201.8 335 41.8
C08p06380 Brassica napus HOM05D009948 ORTHO05D001651 1.5e-36 157.9 88 92.0
AL3G45100 Arabidopsis lyrata HOM05D009948 ORTHO05D003614 2.6e-36 157.1 196 42.3
BolC8t47484H Brassica oleracea HOM05D009948 ORTHO05D001651 1.9e-26 124.4 73 83.6
Thhalv10012301m.g Eutrema salsugineum HOM05D009948 ORTHO05D001651 9.7e-23 112.1 239 35.6
Thhalv10000685m.g Eutrema salsugineum HOM05D009948 ORTHO05D003614 2.5e-18 97.4 204 36.3
BolC7t41447H Brassica oleracea HOM05D009948 ORTHO05D001651 2.0e-15 87.8 196 37.2
Carub.0017s0002 Capsella rubella HOM05D009948 ORTHO05D001651 2.0e-15 87.8 149 31.5
BolC7t40888H Brassica oleracea HOM05D009948 ORTHO05D001651 1.3e-14 85.1 153 37.3
Carub.0017s0001 Capsella rubella HOM05D009948 ORTHO05D001651 2.2e-14 84.3 150 32.0
C06p13280 Brassica napus HOM05D009948 ORTHO05D001651 5.9e-12 76.3 94 41.5
arahy.Tifrunner.gnm1.ann1.8C0UK9 Arachis hypogaea HOM05D000158 ORTHO05D003614 1.4e-08 65.1 282 26.2
BolC7t40889H Brassica oleracea HOM05D009948 ORTHO05D001651 6.8e-08 62.8 91 46.2
arahy.Tifrunner.gnm1.ann1.3J1G6C Arachis hypogaea HOM05D000158 ORTHO05D003614 2.0e-07 61.2 209 27.3
Manes.07G055042 Manihot esculenta HOM05D000158 ORTHO05D003614 2.6e-07 60.8 302 24.8
arahy.Tifrunner.gnm1.ann1.7YB513 Arachis hypogaea HOM05D000158 ORTHO05D003614 9.8e-07 58.9 382 24.6
arahy.Tifrunner.gnm1.ann1.27N94R Arachis hypogaea HOM05D000158 ORTHO05D003614 2.2e-06 57.8 214 26.2
Manes.04G040780 Manihot esculenta HOM05D000158 ORTHO05D001651 2.2e-06 57.8 303 24.1
Manes.04G040789 Manihot esculenta HOM05D000158 ORTHO05D001651 2.2e-06 57.8 303 24.1
HanXRQChr02g0042341 Helianthus annuus HOM05D000158 ORTHO05D003614 3.7e-06 57.0 352 24.7
Sed0021173 Sechium edule HOM05D000158 ORTHO05D003614 3.7e-06 57.0 251 26.3
TPR.G32580 Trifolium pratense HOM05D000158 ORTHO05D003614 4.8e-06 56.6 214 24.8


User provided reference genes

Program Settings