Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p09450 Brassica napus HOM05D000313 ORTHO05D021674 1.3e-38 162.5 79 100.0
BcaC02g09918 Brassica carinata HOM05D000313 ORTHO05D000065 4.6e-12 74.3 70 50.0
BcaC09g51352 Brassica carinata HOM05D000313 ORTHO05D000065 4.6e-12 74.3 70 50.0
C04p35220 Brassica napus HOM05D000313 ORTHO05D000065 4.6e-12 74.3 70 50.0
BolC4t25076H Brassica oleracea HOM05D000313 ORTHO05D000065 4.6e-12 74.3 70 50.0
BcaC03g17051 Brassica carinata HOM05D000313 ORTHO05D000065 3.9e-11 71.2 48 66.7
C04p02900 Brassica napus HOM05D000313 ORTHO05D040407 8.7e-11 70.1 78 44.9
BolC4t21930H Brassica oleracea HOM05D000313 ORTHO05D040407 8.7e-11 70.1 78 44.9
BcaC07g37395 Brassica carinata HOM05D000313 ORTHO05D000065 1.5e-10 69.3 45 62.2
BolC8t47704H Brassica oleracea HOM05D000313 ORTHO05D000065 1.5e-10 69.3 45 62.2
A01p40600 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-10 68.6 45 64.4
BNapus_Darmor_BZH_scaffold_146p00020 Brassica napus HOM05D000313 ORTHO05D041400 2.5e-10 68.6 52 67.3
BolC7t46799H Brassica oleracea HOM05D000313 ORTHO05D041400 2.5e-10 68.6 52 67.3
BraA01t02560Z Brassica rapa HOM05D000313 ORTHO05D000065 2.5e-10 68.6 45 64.4
C01p17210 Brassica napus HOM05D000313 ORTHO05D021674 3.3e-10 68.2 45 64.4
BcaC03g16635 Brassica carinata HOM05D000313 ORTHO05D000065 4.3e-10 67.8 65 50.8
BcaC07g37361 Brassica carinata HOM05D000313 ORTHO05D000065 5.6e-10 67.4 45 60.0
BcaC09g50908 Brassica carinata HOM05D000313 ORTHO05D000065 5.6e-10 67.4 43 60.5
A07p16160 Brassica napus HOM05D000313 ORTHO05D000065 5.6e-10 67.4 43 60.5
A08p20960 Brassica napus HOM05D000313 ORTHO05D000065 5.6e-10 67.4 43 60.5
C01p43800 Brassica napus HOM05D000313 ORTHO05D000065 5.6e-10 67.4 43 60.5
C02p49510 Brassica napus HOM05D000313 ORTHO05D000065 5.6e-10 67.4 43 60.5
C08p08080 Brassica napus HOM05D000313 ORTHO05D000065 5.6e-10 67.4 45 60.0
BolC7t43562H Brassica oleracea HOM05D000313 ORTHO05D000065 5.6e-10 67.4 43 60.5
BolC8t47661H Brassica oleracea HOM05D000313 ORTHO05D000065 5.6e-10 67.4 45 60.0
BcaC02g10698 Brassica carinata HOM05D000313 ORTHO05D000065 7.4e-10 67.0 43 65.1
C04p26780 Brassica napus HOM05D000313 ORTHO05D000065 7.4e-10 67.0 43 65.1
BolC4t24124H Brassica oleracea HOM05D000313 ORTHO05D000065 7.4e-10 67.0 43 65.1
BraA02t08012Z Brassica rapa HOM05D000313 ORTHO05D000065 7.4e-10 67.0 65 49.2
BcaC09g52269 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-09 66.2 43 58.1
BcaB08g35222 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-09 65.9 49 49.0
BcaB08g36535 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-09 65.9 45 60.0
BcaC03g15390 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-09 65.9 45 57.8
C04p40420 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-09 65.9 45 57.8
BolC4t25625H Brassica oleracea HOM05D000313 ORTHO05D000065 1.6e-09 65.9 45 57.8
BolC7t43564H Brassica oleracea HOM05D000313 ORTHO05D000065 1.6e-09 65.9 45 57.8
C09p41840 Brassica napus HOM05D000313 ORTHO05D000065 2.8e-09 65.1 45 57.8
BolC6t37297H Brassica oleracea HOM05D000313 ORTHO05D000065 2.8e-09 65.1 45 57.8
BolC9t57071H Brassica oleracea HOM05D000313 ORTHO05D000065 2.8e-09 65.1 45 57.8
A05p10400 Brassica napus HOM05D000313 ORTHO05D021674 3.7e-09 64.7 47 61.7
BolC7t40545H Brassica oleracea HOM05D000313 ORTHO05D000065 3.7e-09 64.7 57 49.1
BcaB01g05260 Brassica carinata HOM05D000313 ORTHO05D000065 4.8e-09 64.3 53 50.9
C03p10480 Brassica napus HOM05D000313 ORTHO05D000065 4.8e-09 64.3 53 50.9
BolC1t03159H Brassica oleracea HOM05D000313 ORTHO05D000065 4.8e-09 64.3 43 58.1
BcaB01g00111 Brassica carinata HOM05D000313 ORTHO05D021674 1.1e-08 63.2 41 65.9
C05p33380 Brassica napus HOM05D000313 ORTHO05D000065 1.8e-08 62.4 45 51.1
BolC5t32063H Brassica oleracea HOM05D000313 ORTHO05D000065 1.8e-08 62.4 45 51.1
C05p46420 Brassica napus HOM05D000313 ORTHO05D000065 2.4e-08 62.0 45 55.6
BolC5t33369H Brassica oleracea HOM05D000313 ORTHO05D000065 2.4e-08 62.0 45 55.6
BraA03t14449Z Brassica rapa HOM05D000313 ORTHO05D000065 3.1e-08 61.6 45 51.1
BcaNung04477 Brassica carinata HOM05D000313 ORTHO05D000065 4.0e-08 61.2 62 41.9
BraA05t20559Z Brassica rapa HOM05D000313 ORTHO05D000065 4.0e-08 61.2 45 53.3
A03p36970 Brassica napus HOM05D000313 ORTHO05D000065 5.3e-08 60.8 45 55.6
BraA03t12859Z Brassica rapa HOM05D000313 ORTHO05D000065 5.3e-08 60.8 45 55.6
BolC5t32686H Brassica oleracea HOM05D000313 ORTHO05D000065 6.9e-08 60.5 50 52.0
BcaB06g27486 Brassica carinata HOM05D000313 ORTHO05D000065 9.0e-08 60.1 56 50.0
C01p38920 Brassica napus HOM05D000313 ORTHO05D000065 9.0e-08 60.1 46 52.2
BolC1t03842H Brassica oleracea HOM05D000313 ORTHO05D000065 9.0e-08 60.1 46 52.2
BolC5t32095H Brassica oleracea HOM05D000313 ORTHO05D000065 9.0e-08 60.1 85 32.9
BraA01t04033Z Brassica rapa HOM05D000313 ORTHO05D000065 9.0e-08 60.1 46 52.2
BcaC01g04173 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-07 59.7 52 51.9
BcaC02g12357 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-07 59.7 45 55.6
BcaC08g43805 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-07 59.7 45 55.6
A03p61800 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-07 59.7 45 51.1
A06p31410 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-07 59.7 45 51.1
A09p23680 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-07 59.7 74 39.2
A09p40830 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-07 59.7 45 51.1
C04p04790 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-07 59.7 45 55.6
C05p47720 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-07 59.7 45 46.7
BolC5t33481H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-07 59.7 45 46.7
BcaB04g16903 Brassica carinata HOM05D000313 ORTHO05D000065 1.5e-07 59.3 45 51.1
A07p36090 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-07 59.3 45 53.3
BraA09t39507Z Brassica rapa HOM05D000313 ORTHO05D000065 1.5e-07 59.3 45 51.1
BcaC02g08554 Brassica carinata HOM05D000313 ORTHO05D000065 2.6e-07 58.5 56 46.4
BcaC05g27414 Brassica carinata HOM05D000313 ORTHO05D000065 2.6e-07 58.5 45 48.9
A03p06240 Brassica napus HOM05D000313 ORTHO05D000065 2.6e-07 58.5 56 48.2
A03p13160 Brassica napus HOM05D000313 ORTHO05D000065 2.6e-07 58.5 56 48.2
A10p14410 Brassica napus HOM05D000313 ORTHO05D000065 2.6e-07 58.5 56 48.2
C05p25090 Brassica napus HOM05D000313 ORTHO05D000065 2.6e-07 58.5 56 46.4
C05p33640 Brassica napus HOM05D000313 ORTHO05D000065 2.6e-07 58.5 45 48.9
BraA09t40166Z Brassica rapa HOM05D000313 ORTHO05D000065 2.6e-07 58.5 56 48.2
BcaB03g16224 Brassica carinata HOM05D000313 ORTHO05D000065 3.4e-07 58.2 45 53.3
BcaC05g27392 Brassica carinata HOM05D000313 ORTHO05D000065 3.4e-07 58.2 45 44.4
C07p15520 Brassica napus HOM05D000313 ORTHO05D000065 3.4e-07 58.2 71 39.4
BolC7t42040H Brassica oleracea HOM05D000313 ORTHO05D000065 3.4e-07 58.2 71 39.4
BcaC02g08920 Brassica carinata HOM05D000313 ORTHO05D000065 4.5e-07 57.8 45 53.3
BcaC06g31618 Brassica carinata HOM05D000313 ORTHO05D000065 4.5e-07 57.8 53 43.4
A05p08730 Brassica napus HOM05D000313 ORTHO05D000065 4.5e-07 57.8 45 48.9
C04p49110 Brassica napus HOM05D000313 ORTHO05D000065 4.5e-07 57.8 45 53.3
C05p18010 Brassica napus HOM05D000313 ORTHO05D000065 4.5e-07 57.8 45 53.3
C09p57200 Brassica napus HOM05D000313 ORTHO05D000065 4.5e-07 57.8 59 37.3
BolC3t21647H Brassica oleracea HOM05D000313 ORTHO05D000065 4.5e-07 57.8 71 39.4
BcaC07g37052 Brassica carinata HOM05D000313 ORTHO05D000065 5.8e-07 57.4 45 46.7
C04p21440 Brassica napus HOM05D000313 ORTHO05D000065 5.8e-07 57.4 44 52.3
C06p11820 Brassica napus HOM05D000313 ORTHO05D024047 5.8e-07 57.4 45 51.1
C07p18950 Brassica napus HOM05D000313 ORTHO05D000065 5.8e-07 57.4 45 53.3
BolC4t23669H Brassica oleracea HOM05D000313 ORTHO05D000065 5.8e-07 57.4 44 52.3
BolC5t30506H Brassica oleracea HOM05D000313 ORTHO05D000065 5.8e-07 57.4 45 51.1
BraA09t35833Z Brassica rapa HOM05D000313 ORTHO05D000065 5.8e-07 57.4 50 42.0
A10p12060 Brassica napus HOM05D000313 ORTHO05D000065 7.6e-07 57.0 45 48.9
BolC6t39891H Brassica oleracea HOM05D000313 ORTHO05D000065 7.6e-07 57.0 38 60.5
BolC7t45741H Brassica oleracea HOM05D000313 ORTHO05D000065 7.6e-07 57.0 66 40.9
BcaB04g17117 Brassica carinata HOM05D000313 ORTHO05D000065 9.9e-07 56.6 45 48.9
BcaB05g23819 Brassica carinata HOM05D000756 ORTHO05D000604 9.9e-07 56.6 45 48.9
BcaC06g35487 Brassica carinata HOM05D000313 ORTHO05D000065 9.9e-07 56.6 71 38.0
BcaNung02470 Brassica carinata HOM05D000313 ORTHO05D000065 9.9e-07 56.6 45 44.4
C01p35780 Brassica napus HOM05D000313 ORTHO05D000065 9.9e-07 56.6 45 53.3
C07p40640 Brassica napus HOM05D000313 ORTHO05D000065 9.9e-07 56.6 45 44.4
BolC1t03539H Brassica oleracea HOM05D000313 ORTHO05D000065 9.9e-07 56.6 45 53.3
BcaB05g22169 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-06 56.2 52 46.2
BcaC09g48338 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-06 56.2 51 49.0
C02p57090 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-06 56.2 51 49.0
BolC2t12325H Brassica oleracea HOM05D000313 ORTHO05D000065 1.3e-06 56.2 51 49.0
BolC9t58587H Brassica oleracea HOM05D000313 ORTHO05D000065 1.3e-06 56.2 59 35.6
BraA08t34530Z Brassica rapa HOM05D000313 ORTHO05D000065 1.3e-06 56.2 51 49.0
BcaB02g10926 Brassica carinata HOM05D000313 ORTHO05D000065 1.7e-06 55.8 45 46.7
C03p68040 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-06 55.8 59 35.6
BolC3t19028H Brassica oleracea HOM05D000313 ORTHO05D000065 1.7e-06 55.8 59 35.6
BcaB05g23049 Brassica carinata HOM05D000313 ORTHO05D000065 2.2e-06 55.5 62 37.1
BcaNung03865 Brassica carinata HOM05D000313 ORTHO05D000065 2.2e-06 55.5 30 73.3
A09p22770 Brassica napus HOM05D000313 ORTHO05D000065 2.2e-06 55.5 56 46.4
C01p35750 Brassica napus HOM05D000313 ORTHO05D000065 2.2e-06 55.5 46 52.2
BraA02t07522Z Brassica rapa HOM05D000313 ORTHO05D000065 2.2e-06 55.5 44 47.7
BcaC05g27737 Brassica carinata HOM05D000313 ORTHO05D000065 2.9e-06 55.1 45 48.9
C05p37250 Brassica napus HOM05D000313 ORTHO05D000065 2.9e-06 55.1 45 48.9
C08p15350 Brassica napus HOM05D000313 ORTHO05D000065 2.9e-06 55.1 44 45.5
BolC3t20344H Brassica oleracea HOM05D000313 ORTHO05D000065 2.9e-06 55.1 44 45.5
A08p13670 Brassica napus HOM05D000313 ORTHO05D021765 3.8e-06 54.7 51 47.1
C03p49010 Brassica napus HOM05D000313 ORTHO05D000065 3.8e-06 54.7 45 48.9
C05p17990 Brassica napus HOM05D000313 ORTHO05D000065 3.8e-06 54.7 45 48.9
BolC3t17179H Brassica oleracea HOM05D000313 ORTHO05D000065 3.8e-06 54.7 45 48.9
C01p04300 Brassica napus HOM05D000313 ORTHO05D000065 4.9e-06 54.3 45 46.7
BcaC01g03018 Brassica carinata HOM05D000313 ORTHO05D000065 6.4e-06 53.9 45 44.4
C03p57090 Brassica napus HOM05D000313 ORTHO05D000065 6.4e-06 53.9 45 44.4
C09p44110 Brassica napus HOM05D000313 ORTHO05D000065 6.4e-06 53.9 45 44.4
BolC3t17987H Brassica oleracea HOM05D000313 ORTHO05D000065 6.4e-06 53.9 45 44.4
BcaNung01475 Brassica carinata HOM05D000313 ORTHO05D000065 8.4e-06 53.5 51 41.2
C07p23830 Brassica napus HOM05D000313 ORTHO05D000065 8.4e-06 53.5 47 51.1
C07p52440 Brassica napus HOM05D000313 ORTHO05D000065 8.4e-06 53.5 51 41.2
BolC7t45738H Brassica oleracea HOM05D000313 ORTHO05D000065 8.4e-06 53.5 51 41.2


User provided reference genes

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