Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p09360 Brassica napus HOM05D004788 ORTHO05D017669 1.6e-82 309.3 147 100.0
BolC7t41359H Brassica oleracea HOM05D004788 ORTHO05D017669 2.0e-77 292.4 148 95.9
C09p51520 Brassica napus HOM05D004788 ORTHO05D017669 3.2e-51 205.3 139 74.8
Sp4g11690 Schrenkiella parvula HOM05D004788 ORTHO05D006465 2.8e-31 139.0 105 68.6
BcaB02g10208 Brassica carinata HOM05D004788 ORTHO05D006465 4.8e-31 138.3 109 67.9
AT2G28880 Arabidopsis thaliana HOM05D004788 ORTHO05D006465 5.3e-30 134.8 105 65.7
C04p22120 Brassica napus HOM05D004788 ORTHO05D006465 2.0e-29 132.9 97 73.2
BolC4t23734H Brassica oleracea HOM05D004788 ORTHO05D006465 2.0e-29 132.9 97 73.2
BcaC02g11019 Brassica carinata HOM05D004788 ORTHO05D006465 2.7e-29 132.5 110 67.3
Thhalv10016200m.g Eutrema salsugineum HOM05D004788 ORTHO05D006465 4.5e-29 131.7 106 66.0
BraA04t17760Z Brassica rapa HOM05D004788 ORTHO05D006465 7.7e-29 131.0 104 66.3
C05p55670 Brassica napus HOM05D004788 ORTHO05D017669 1.0e-28 130.6 96 69.8
A04p21930 Brassica napus HOM05D004788 ORTHO05D006465 1.3e-28 130.2 125 57.6
A07p19340 Brassica napus HOM05D004788 ORTHO05D006465 2.9e-28 129.0 99 67.7
Aa31LG5G7350 Aethionema arabicum HOM05D004788 ORTHO05D006465 5.0e-28 128.3 96 65.6
BcaB06g28261 Brassica carinata HOM05D004788 ORTHO05D006465 5.0e-28 128.3 109 61.5
AL4G23410 Arabidopsis lyrata HOM05D004788 ORTHO05D006465 6.5e-28 127.9 105 63.8
BcaC02g08128 Brassica carinata HOM05D004788 ORTHO05D006465 6.5e-28 127.9 105 65.7
C04p58070 Brassica napus HOM05D004788 ORTHO05D006465 6.5e-28 127.9 105 65.7
Carub.0004s0987 Capsella rubella HOM05D004788 ORTHO05D006465 1.5e-27 126.7 92 69.6
BolC4t27333H Brassica oleracea HOM05D004788 ORTHO05D006465 4.2e-27 125.2 105 64.8
Manes.07G101300 Manihot esculenta HOM05D004788 ORTHO05D006465 1.0e-20 104.0 112 51.8
EL10Ac5g12961 Beta vulgaris HOM05D004788 ORTHO05D006465 1.3e-20 103.6 95 54.7
CSS0002233 Camellia sinensis var. sinensis HOM05D004788 ORTHO05D006465 2.3e-20 102.8 112 51.8
CSS0028648 Camellia sinensis var. sinensis HOM05D004788 ORTHO05D006465 2.3e-20 102.8 112 51.8
Peaxi162Scf00747g00211 Petunia axillaris HOM05D004788 ORTHO05D006465 5.0e-20 101.7 112 52.7
Psat6g184480 Pisum sativum HOM05D004788 ORTHO05D006465 5.0e-20 101.7 99 53.5
Ciclev10030655m.g Citrus clementina HOM05D004788 ORTHO05D006465 8.6e-20 100.9 91 57.1
CAN.G4.2 Capsicum annuum HOM05D004788 ORTHO05D006465 1.1e-19 100.5 108 51.9
Migut.F01772 Erythranthe guttata HOM05D004788 ORTHO05D006465 1.5e-19 100.1 112 50.9
SalBow5G2521 Salvia bowleyana HOM05D004788 ORTHO05D006465 1.5e-19 100.1 108 50.9
arahy.Tifrunner.gnm1.ann1.M3N3P9 Arachis hypogaea HOM05D004788 ORTHO05D006465 2.5e-19 99.4 94 53.2
Ca_29597_v3 Cicer arietinum L. HOM05D004788 ORTHO05D006465 2.5e-19 99.4 99 52.5
Hma1.2p1_0030F.1_g018330 Hydrangea macrophylla HOM05D004788 ORTHO05D006465 2.5e-19 99.4 98 52.0
Potri.010G221500 Populus trichocarpa HOM05D004788 ORTHO05D006465 2.5e-19 99.4 105 53.3
Hma1.2p1_0030F.1_g018320 Hydrangea macrophylla HOM05D004788 ORTHO05D006465 3.3e-19 99.0 112 49.1
Rhsim09G0110900 Rhododendron simsii HOM05D004788 ORTHO05D006465 3.3e-19 99.0 112 51.8
Ah.12g052940 Amaranthus hybridus HOM05D004788 ORTHO05D006465 5.5e-19 98.2 103 52.4
TPR.G1941 Trifolium pratense HOM05D004788 ORTHO05D006465 5.5e-19 98.2 99 51.5
ECA232G0614 Erigeron canadensis HOM05D004788 ORTHO05D006465 9.5e-19 97.4 113 48.7
Medtr1g095360 Medicago truncatula HOM05D004788 ORTHO05D006465 9.5e-19 97.4 90 55.6
TAR626G1809 Trochodendron aralioides HOM05D004788 ORTHO05D006465 1.6e-18 96.7 105 55.2
Solyc04g049360.3 Solanum lycopersicum HOM05D004788 ORTHO05D006465 2.8e-18 95.9 112 48.2
Lj5g0009066 Lotus japonicus HOM05D004788 ORTHO05D006465 3.6e-18 95.5 94 54.3
Sopen04g019320 Solanum pennellii HOM05D004788 ORTHO05D006465 3.6e-18 95.5 112 48.2
VMungo0720G1279 Vigna mungo HOM05D004788 ORTHO05D006465 3.6e-18 95.5 118 47.5
arahy.Tifrunner.gnm1.ann1.6SV6NI Arachis hypogaea HOM05D004788 ORTHO05D006465 4.7e-18 95.1 94 51.1
Phvul.007G094100 Phaseolus vulgaris HOM05D004788 ORTHO05D006465 4.7e-18 95.1 87 57.5
arahy.Tifrunner.gnm1.ann1.CYD8BJ Arachis hypogaea HOM05D004788 ORTHO05D006465 6.1e-18 94.7 94 53.2
Cpa.g.sc53.70 Carica papaya HOM05D004788 ORTHO05D006465 6.1e-18 94.7 105 52.4
COL.COLO4_23692 Corchorus olitorius HOM05D004788 ORTHO05D006465 6.1e-18 94.7 112 49.1
Nn8g40780 Nelumbo nucifera HOM05D004788 ORTHO05D006465 6.1e-18 94.7 112 47.3
Nitab4.5_0013243g0010 Nicotiana tabacum HOM05D004788 ORTHO05D006465 6.1e-18 94.7 112 50.0
Sc20g0001910 Simmondsia chinensis HOM05D004788 ORTHO05D006465 6.1e-18 94.7 108 49.1
BolC8t47938H Brassica oleracea HOM05D004788 ORTHO05D017669 1.0e-17 94.0 52 90.4
AUR62019882 Chenopodium quinoa HOM05D004788 ORTHO05D006465 1.0e-17 94.0 108 49.1
Lsat_1_v5_gn_4_181581 Lactuca sativa HOM05D004788 ORTHO05D006465 1.4e-17 93.6 68 64.7
Haze_16900 Corylus avellana HOM05D004788 ORTHO05D006465 1.8e-17 93.2 107 49.5
HanXRQChr08g0208591 Helianthus annuus HOM05D004788 ORTHO05D006465 1.8e-17 93.2 80 58.8
AUR62007018 Chenopodium quinoa HOM05D004788 ORTHO05D006465 2.3e-17 92.8 68 67.6
Glyma.20G179400 Glycine max HOM05D004788 ORTHO05D006465 2.3e-17 92.8 87 55.2
Lalb_Chr02g0142131 Lupinus albus HOM05D004788 ORTHO05D006465 2.3e-17 92.8 108 48.1
CiPaw.02G174400 Carya illinoinensis HOM05D004788 ORTHO05D006465 3.0e-17 92.4 108 50.0
Gohir.A10G206600 Gossypium hirsutum HOM05D004788 ORTHO05D006465 3.0e-17 92.4 102 50.0
Gorai.011G240300 Gossypium raimondii HOM05D004788 ORTHO05D006465 3.0e-17 92.4 96 55.2
arahy.Tifrunner.gnm1.ann1.L4RTFU Arachis hypogaea HOM05D004788 ORTHO05D006465 4.0e-17 92.0 94 50.0
Sabra10G0171400 Salix brachista HOM05D004788 ORTHO05D006465 4.0e-17 92.0 118 45.8
TWI38G1549 Tripterygium wilfordii HOM05D004788 ORTHO05D006465 5.2e-17 91.7 119 45.4
GSVIVG01016291001 Vitis vinifera HOM05D004788 ORTHO05D006465 5.2e-17 91.7 112 48.2
ClCG05G020950 Citrullus lanatus HOM05D004788 ORTHO05D006465 6.8e-17 91.3 89 57.3
Cc09_g02020 Coffea canephora HOM05D004788 ORTHO05D006465 6.8e-17 91.3 98 50.0
Duzib128G1556 Durio zibethinus HOM05D004788 ORTHO05D006465 8.9e-17 90.9 82 59.8
PGR142G2437 Punica granatum HOM05D004788 ORTHO05D006465 8.9e-17 90.9 112 48.2
SHI08836 Sapria himalayana HOM05D004788 ORTHO05D006465 8.9e-17 90.9 67 62.7
MELO3C012434.2 Cucumis melo HOM05D004788 ORTHO05D006465 1.2e-16 90.5 68 64.7
CsaV3_5G036360 Cucumis sativus L. HOM05D004788 ORTHO05D006465 1.2e-16 90.5 68 64.7
Gohir.D10G214700 Gossypium hirsutum HOM05D004788 ORTHO05D006465 1.2e-16 90.5 96 54.2
Glyma.10G211600 Glycine max HOM05D004788 ORTHO05D006465 1.5e-16 90.1 87 54.0
Oeu043947.4 Olea europaea HOM05D004788 ORTHO05D006465 2.6e-16 89.4 89 55.1
CANSAT25G2619 Cannabis sativa HOM05D004788 ORTHO05D006465 3.4e-16 89.0 108 46.3
DCAR_015314 Daucus carota HOM05D004788 ORTHO05D006465 5.7e-16 88.2 112 46.4
MD01G1109300 Malus domestica HOM05D004788 ORTHO05D006465 9.8e-16 87.4 72 62.5
GSVIVG01016290001 Vitis vinifera HOM05D004788 ORTHO05D006465 9.8e-16 87.4 88 53.4
C04p59820 Brassica napus HOM05D000144 ORTHO05D017669 1.3e-15 87.0 49 85.7
C04p59860 Brassica napus HOM05D000144 ORTHO05D017669 1.3e-15 87.0 49 85.7
MD07G1175300 Malus domestica HOM05D004788 ORTHO05D006465 1.3e-15 87.0 68 64.7
QL08p056120 Quercus lobata HOM05D004788 ORTHO05D006465 2.2e-15 86.3 105 49.5
RcHm_v2.0_Chr1g0363521 Rosa chinensis HOM05D004788 ORTHO05D006465 2.2e-15 86.3 102 46.1
SGA_v2.0_scaffold341G49365 Striga asiatica HOM05D004788 ORTHO05D006465 2.2e-15 86.3 82 54.9
ATR0626G067 Amborella trichopoda HOM05D004788 ORTHO05D006465 2.8e-15 85.9 96 49.0
PSO170G4427 Papaver somniferum HOM05D004788 ORTHO05D006465 3.7e-15 85.5 89 51.7
PSO063G3786 Papaver somniferum HOM05D004788 ORTHO05D006465 4.9e-15 85.1 89 50.6
unitig_60.g25702 Utricularia gibba HOM05D004788 ORTHO05D006465 4.9e-15 85.1 83 55.4
Dinv11782 Davidia involucrata HOM05D004788 ORTHO05D006465 8.3e-15 84.3 82 57.3
FvH4_7g19690 Fragaria vesca HOM05D004788 ORTHO05D006465 8.3e-15 84.3 102 48.0
FAN10G0780 Fragaria x ananassa HOM05D004788 ORTHO05D006465 8.3e-15 84.3 72 61.1
FAN10G0980 Fragaria x ananassa HOM05D004788 ORTHO05D006465 8.3e-15 84.3 102 48.0
FAN01G2387 Fragaria x ananassa HOM05D004788 ORTHO05D006465 1.8e-14 83.2 90 52.2
FAN03G1313 Fragaria x ananassa HOM05D004788 ORTHO05D006465 2.4e-14 82.8 123 41.5
FAN06G3031 Fragaria x ananassa HOM05D004788 ORTHO05D006465 2.4e-14 82.8 72 59.7
Aqoxy7G02809 Aquilegia oxysepala HOM05D004788 ORTHO05D006465 3.1e-14 82.4 87 52.9
Mapoly0009s0140 Marchantia polymorpha HOM05D004788 ORTHO05D006465 9.2e-14 80.9 98 50.0
SEGI_34163 Sequoiadendron giganteum HOM05D004788 ORTHO05D006465 1.0e-12 77.4 86 50.0
HPP92_010286 Vanilla planifolia HOM05D004788 ORTHO05D006465 1.3e-12 77.0 79 54.4
Actinidia16628 Actinidia chinensis HOM05D004788 ORTHO05D006465 8.6e-12 74.3 80 51.2
AagrBONN_evm.TU.Sc2ySwM_26.2 Anthoceros agrestis HOM05D004788 ORTHO05D006465 8.6e-12 74.3 67 55.2
Pp3c26_2070 Physcomitrium patens HOM05D004788 ORTHO05D006465 1.1e-11 73.9 100 41.0
MBI13_g34045_MAGBIO Magnolia biondii HOM05D004788 ORTHO05D006465 4.7e-10 68.6 113 38.9
BolC9t58010H Brassica oleracea HOM05D004788 ORTHO05D017669 1.0e-09 67.4 40 82.5
FvH4_7g19560 Fragaria vesca HOM05D004788 ORTHO05D006465 1.0e-09 67.4 98 43.9
SMO356G0457 Selaginella moellendorffii HOM05D004788 ORTHO05D006465 2.3e-09 66.2 80 48.8
AagrBONN_evm.TU.Sc2ySwM_295.1 Anthoceros agrestis HOM05D004788 ORTHO05D006465 4.0e-09 65.5 64 50.0
CBR_g2786 Chara braunii HOM05D004788 ORTHO05D006465 1.5e-08 63.5 67 52.2
Lj1C915G0 Lonicera japonica HOM05D004788 ORTHO05D006465 5.8e-08 61.6 167 32.9
Eucgr.G02823 Eucalyptus grandis HOM05D004788 ORTHO05D006465 1.7e-07 60.1 53 58.5
Cre03.g181400 Chlamydomonas reinhardtii HOM05D004788 ORTHO05D006465 5.4e-06 55.1 67 41.8
CDE05G0857 Ceratophyllum demersum HOM05D004788 ORTHO05D006465 7.0e-06 54.7 77 42.9
Sed0008505 Sechium edule HOM05D004788 ORTHO05D006465 7.0e-06 54.7 65 49.2


User provided reference genes

Program Settings