Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p08980 Brassica napus HOM05D007818 ORTHO05D011878 8.3e-48 193.4 96 100.0
C02p15660 Brassica napus HOM05D007818 ORTHO05D011878 4.1e-47 191.0 95 97.9
C05p36060 Brassica napus HOM05D007818 ORTHO05D015522 7.0e-47 190.3 95 97.9
BolC6t36793H Brassica oleracea HOM05D007818 ORTHO05D011878 7.0e-47 190.3 95 97.9
BcaC09g49197 Brassica carinata HOM05D007818 ORTHO05D011878 1.6e-46 189.1 95 97.9
C01p41510 Brassica napus HOM05D007818 ORTHO05D015522 1.6e-46 189.1 95 97.9
C07p11950 Brassica napus HOM05D007818 ORTHO05D015522 1.6e-46 189.1 95 96.8
C01p45320 Brassica napus HOM05D007818 ORTHO05D011878 3.5e-46 188.0 95 95.8
A01p25450 Brassica napus HOM05D007818 ORTHO05D015522 1.0e-45 186.4 95 95.8
BolC6t35450H Brassica oleracea HOM05D007818 ORTHO05D015522 1.3e-45 186.0 95 95.8
BraA01t02469Z Brassica rapa HOM05D007818 ORTHO05D015522 1.3e-45 186.0 95 95.8
BraA06t25340Z Brassica rapa HOM05D007818 ORTHO05D015522 1.2e-43 179.5 95 91.6
BraA01t01576Z Brassica rapa HOM05D007818 ORTHO05D015522 1.6e-43 179.1 95 91.6
C04p35200 Brassica napus HOM05D007818 ORTHO05D015522 3.6e-43 177.9 95 90.5
A07p05920 Brassica napus HOM05D007818 ORTHO05D015522 4.7e-43 177.6 101 89.1
C07p00660 Brassica napus HOM05D007818 ORTHO05D000013 1.7e-32 142.5 67 100.0
BolC5t32989H Brassica oleracea HOM05D007818 ORTHO05D011878 1.7e-32 142.5 67 100.0
C04p55370 Brassica napus HOM05D007818 ORTHO05D000013 8.3e-32 140.2 67 97.0
C05p44350 Brassica napus HOM05D007818 ORTHO05D000013 8.3e-32 140.2 67 98.5
C05p45440 Brassica napus HOM05D007818 ORTHO05D000013 1.1e-31 139.8 67 97.0
C04p47800 Brassica napus HOM05D007818 ORTHO05D014962 1.9e-31 139.0 69 97.1
C01p48070 Brassica napus HOM05D007818 ORTHO05D000013 4.1e-31 137.9 67 95.5
BraSC37t46122Z Brassica rapa HOM05D007818 ORTHO05D011878 4.1e-31 137.9 67 95.5
BolC6t36717H Brassica oleracea HOM05D007818 ORTHO05D011878 7.0e-31 137.1 67 95.5
C07p06900 Brassica napus HOM05D007818 ORTHO05D000013 2.0e-30 135.6 66 93.9
BraA03t15276Z Brassica rapa HOM05D007818 ORTHO05D011878 3.5e-30 134.8 67 91.0
C04p05450 Brassica napus HOM05D007818 ORTHO05D011878 7.8e-30 133.7 68 92.6
A10p08820 Brassica napus HOM05D007818 ORTHO05D011878 1.1e-28 129.8 67 91.0
BcaC05g26853 Brassica carinata HOM05D007818 ORTHO05D011878 4.3e-28 127.9 81 80.2
BolC9t59179H Brassica oleracea HOM05D007818 ORTHO05D011878 1.6e-22 109.4 52 100.0
BolC7t41573H Brassica oleracea HOM05D007818 ORTHO05D015522 1.7e-21 105.9 52 96.2
C07p11030 Brassica napus HOM05D007818 ORTHO05D011878 3.0e-21 105.1 52 96.2
BolC3t19390H Brassica oleracea HOM05D007818 ORTHO05D018576 1.9e-20 102.4 95 58.9
BolC4t23619H Brassica oleracea HOM05D007818 ORTHO05D018576 3.3e-20 101.7 95 55.8
BcaC06g36234 Brassica carinata HOM05D007818 ORTHO05D018576 7.3e-20 100.5 95 56.8
BraA09t37757Z Brassica rapa HOM05D007818 ORTHO05D015532 7.3e-20 100.5 95 55.8
BolC4t22585H Brassica oleracea HOM05D007818 ORTHO05D018576 3.1e-18 95.1 95 54.7
BolC9t56135H Brassica oleracea HOM05D007818 ORTHO05D011878 1.5e-17 92.8 75 62.7
BolC3t19185H Brassica oleracea HOM05D007818 ORTHO05D011878 3.4e-17 91.7 81 59.3
BcaC08g42821 Brassica carinata HOM05D007818 ORTHO05D018576 5.8e-17 90.9 95 53.7
BcaB04g18488 Brassica carinata HOM05D001498 ORTHO05D011448 6.4e-16 87.4 88 48.9
BolC1t04860H Brassica oleracea HOM05D001498 ORTHO05D013033 1.1e-15 86.7 85 50.6
A08p07520 Brassica napus HOM05D001498 ORTHO05D013033 1.9e-15 85.9 90 50.0
C03p66020 Brassica napus HOM05D001498 ORTHO05D011448 1.9e-15 85.9 90 50.0
C03p80470 Brassica napus HOM05D001498 ORTHO05D011448 1.9e-15 85.9 90 50.0
C04p36720 Brassica napus HOM05D001498 ORTHO05D011448 1.9e-15 85.9 90 50.0
BolC3t18712H Brassica oleracea HOM05D001498 ORTHO05D011448 1.9e-15 85.9 90 50.0
BolC6t36733H Brassica oleracea HOM05D001498 ORTHO05D011506 1.9e-15 85.9 90 50.0
BolC9t54650H Brassica oleracea HOM05D001498 ORTHO05D013033 1.9e-15 85.9 90 50.0
BcaC01g06537 Brassica carinata HOM05D001498 ORTHO05D011448 2.4e-15 85.5 90 50.0
A08p08110 Brassica napus HOM05D001498 ORTHO05D011448 2.4e-15 85.5 90 50.0
BolC3t13783H Brassica oleracea HOM05D001498 ORTHO05D011448 2.4e-15 85.5 90 50.0
C04p41870 Brassica napus HOM05D001498 ORTHO05D011448 3.2e-15 85.1 90 48.9
BolC3t19486H Brassica oleracea HOM05D001498 ORTHO05D013033 3.2e-15 85.1 90 48.9
C05p34950 Brassica napus HOM05D001498 ORTHO05D011448 4.1e-15 84.7 90 48.9
C09p19430 Brassica napus HOM05D001498 ORTHO05D013028 4.1e-15 84.7 90 50.0
BraA07t28351Z Brassica rapa HOM05D001498 ORTHO05D011448 4.1e-15 84.7 90 50.0
C09p16600 Brassica napus HOM05D001498 ORTHO05D011448 7.1e-15 84.0 90 48.9
BolC6t37504H Brassica oleracea HOM05D001498 ORTHO05D013033 7.1e-15 84.0 68 55.9
A05p28410 Brassica napus HOM05D001498 ORTHO05D011448 9.2e-15 83.6 90 50.0
A08p06040 Brassica napus HOM05D001498 ORTHO05D013028 9.2e-15 83.6 90 50.0
A08p09500 Brassica napus HOM05D001498 ORTHO05D011448 1.6e-14 82.8 90 50.0
C03p75890 Brassica napus HOM05D001498 ORTHO05D011448 1.6e-14 82.8 90 48.9
C08p08890 Brassica napus HOM05D001498 ORTHO05D011448 1.6e-14 82.8 85 48.2
BcaC02g10288 Brassica carinata HOM05D001498 ORTHO05D011448 2.1e-14 82.4 64 56.2
C07p12870 Brassica napus HOM05D007818 ORTHO05D011878 2.1e-14 82.4 75 57.3
C01p30540 Brassica napus HOM05D001498 ORTHO05D011263 2.7e-14 82.0 90 47.8
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 2.7e-14 82.0 90 48.9
C08p06700 Brassica napus HOM05D001498 ORTHO05D011448 2.7e-14 82.0 67 53.7
BraA08t32604Z Brassica rapa HOM05D001498 ORTHO05D011263 2.7e-14 82.0 68 55.9
BcaB07g33901 Brassica carinata HOM05D007818 ORTHO05D011878 3.5e-14 81.6 52 73.1
A10p06620 Brassica napus HOM05D001498 ORTHO05D011448 4.6e-14 81.3 64 56.2
BcaC09g49625 Brassica carinata HOM05D001498 ORTHO05D031765 6.0e-14 80.9 60 58.3
C09p28440 Brassica napus HOM05D001498 ORTHO05D013033 6.0e-14 80.9 85 48.2
A01p26280 Brassica napus HOM05D001498 ORTHO05D011448 7.8e-14 80.5 90 47.8
C02p52010 Brassica napus HOM05D001498 ORTHO05D013028 7.8e-14 80.5 90 48.9
BolC6t38704H Brassica oleracea HOM05D001498 ORTHO05D011448 7.8e-14 80.5 90 47.8
C03p66160 Brassica napus HOM05D007818 ORTHO05D041367 1.0e-13 80.1 75 56.0
C07p30740 Brassica napus HOM05D001498 ORTHO05D011448 1.7e-13 79.3 90 47.8
C08p17900 Brassica napus HOM05D001498 ORTHO05D011448 1.7e-13 79.3 90 47.8
BolC8t49420H Brassica oleracea HOM05D001498 ORTHO05D011448 1.7e-13 79.3 90 47.8
BolC6t36734H Brassica oleracea HOM05D001498 ORTHO05D011448 2.3e-13 79.0 83 48.2
A10p06870 Brassica napus HOM05D001498 ORTHO05D013033 3.0e-13 78.6 84 48.8
C09p27450 Brassica napus HOM05D001498 ORTHO05D013033 3.9e-13 78.2 90 46.7
BcaC07g38655 Brassica carinata HOM05D001498 ORTHO05D011448 6.6e-13 77.4 90 45.6
BolC3t18888H Brassica oleracea HOM05D007818 ORTHO05D041367 8.6e-13 77.0 75 54.7
C04p21390 Brassica napus HOM05D001498 ORTHO05D013033 1.1e-12 76.6 81 49.4
C01p34360 Brassica napus HOM05D001498 ORTHO05D031765 1.9e-12 75.9 57 56.1
BolC1t03406H Brassica oleracea HOM05D001498 ORTHO05D031765 1.9e-12 75.9 57 56.1
BcaC04g19840 Brassica carinata HOM05D007818 ORTHO05D018576 3.3e-12 75.1 95 46.3
C06p31040 Brassica napus HOM05D001498 ORTHO05D013033 5.6e-12 74.3 78 48.7
C07p01260 Brassica napus HOM05D001498 ORTHO05D011448 5.6e-12 74.3 90 47.8
C06p26590 Brassica napus HOM05D007818 ORTHO05D015522 7.3e-12 73.9 37 97.3
A09p33380 Brassica napus HOM05D001498 ORTHO05D013033 9.6e-12 73.6 81 48.1
BraA09t38880Z Brassica rapa HOM05D001498 ORTHO05D013033 9.6e-12 73.6 81 48.1
C06p23310 Brassica napus HOM05D001498 ORTHO05D013033 2.1e-11 72.4 81 46.9
BraA09t40145Z Brassica rapa HOM05D001498 ORTHO05D013033 8.1e-11 70.5 82 46.3
C07p08860 Brassica napus HOM05D007818 ORTHO05D042921 2.4e-10 68.9 38 73.7
BolC7t41300H Brassica oleracea HOM05D007818 ORTHO05D042921 2.4e-10 68.9 38 73.7
BcaC01g01870 Brassica carinata HOM05D007818 ORTHO05D018576 2.6e-09 65.5 49 63.3
C06p18080 Brassica napus HOM05D001498 ORTHO05D011878 2.6e-09 65.5 52 53.8
C09p17590 Brassica napus HOM05D001498 ORTHO05D013033 5.8e-09 64.3 52 53.8
C03p66360 Brassica napus HOM05D001498 ORTHO05D013028 1.7e-08 62.8 52 50.0
BolC3t18909H Brassica oleracea HOM05D001498 ORTHO05D011448 1.7e-08 62.8 52 50.0
BcaC02g11123 Brassica carinata HOM05D007818 ORTHO05D092278 2.2e-08 62.4 68 50.0
BcaC06g33590 Brassica carinata HOM05D001498 ORTHO05D093683 2.2e-08 62.4 74 47.3
C06p04830 Brassica napus HOM05D001379 ORTHO05D001277 2.7e-06 55.5 29 96.6
C07p01150 Brassica napus HOM05D001379 ORTHO05D001277 2.7e-06 55.5 29 96.6
C03p58240 Brassica napus HOM05D001379 ORTHO05D001277 3.5e-06 55.1 29 96.6
C03p44600 Brassica napus HOM05D001498 ORTHO05D011448 4.6e-06 54.7 58 51.7
BolC4t26382H Brassica oleracea HOM05D007818 ORTHO05D014962 4.6e-06 54.7 29 96.6


User provided reference genes

Program Settings