Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g36103 Brassica carinata HOM05D011423 ORTHO05D009890 5.1e-24 114.0 77 100.0
C07p07820 Brassica napus HOM05D011423 ORTHO05D009890 5.1e-24 114.0 77 100.0
BolC7t41200H Brassica oleracea HOM05D011423 ORTHO05D009890 5.1e-24 114.0 77 100.0
BraA07t28276Z Brassica rapa HOM05D011423 ORTHO05D009890 2.5e-23 111.7 77 98.7
AL3G47790 Arabidopsis lyrata HOM05D011423 ORTHO05D009890 9.0e-21 103.2 77 68.8
Sp3g29250 Schrenkiella parvula HOM05D011423 ORTHO05D009890 3.4e-20 101.3 77 67.5
Thhalv10022948m.g Eutrema salsugineum HOM05D011423 ORTHO05D009890 5.9e-20 100.5 77 66.2
CARHR106280 Cardamine hirsuta HOM05D011423 ORTHO05D009890 5.0e-19 97.4 78 65.4
AT2G15960 Arabidopsis thaliana HOM05D011423 ORTHO05D009890 7.2e-18 93.6 78 62.8
Carub.0003s2983 Capsella rubella HOM05D011423 ORTHO05D009890 7.9e-17 90.1 79 67.1
A03p45660 Brassica napus HOM05D011423 ORTHO05D009890 3.9e-16 87.8 77 62.3
BraA03t13698Z Brassica rapa HOM05D011423 ORTHO05D009890 3.9e-16 87.8 77 62.3
C03p56720 Brassica napus HOM05D011423 ORTHO05D009890 1.5e-15 85.9 77 59.7
BolC3t17956H Brassica oleracea HOM05D011423 ORTHO05D009890 1.5e-15 85.9 77 59.7
BcaB08g34619 Brassica carinata HOM05D011423 ORTHO05D009890 1.6e-14 82.4 77 61.0
Lj3g0002198 Lotus japonicus HOM05D008520 ORTHO05D009890 4.4e-07 57.8 77 39.0
Phvul.011G050000 Phaseolus vulgaris HOM05D008520 ORTHO05D009890 4.4e-07 57.8 77 40.3
arahy.Tifrunner.gnm1.ann1.4L7A6H Arachis hypogaea HOM05D008520 ORTHO05D009890 1.3e-06 56.2 77 39.0
arahy.Tifrunner.gnm1.ann1.H0FE8D Arachis hypogaea HOM05D008520 ORTHO05D009890 1.3e-06 56.2 77 39.0
Glyma.12G048000 Glycine max HOM05D008520 ORTHO05D009890 1.7e-06 55.8 77 42.9
Ciclev10029756m.g Citrus clementina HOM05D008520 ORTHO05D009890 2.8e-06 55.1 77 35.1
Lalb_Chr01g0002971 Lupinus albus HOM05D008520 ORTHO05D009890 6.3e-06 53.9 77 37.7


User provided reference genes

Program Settings