Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p07620 Brassica napus HOM05D012943 ORTHO05D032960 9.3e-159 563.5 294 100.0
BolC7t41183H Brassica oleracea HOM05D012943 ORTHO05D032960 6.0e-158 560.8 294 99.7
BcaC06g36115 Brassica carinata HOM05D012943 ORTHO05D032960 6.5e-152 540.8 294 97.3
C06p04030 Brassica napus HOM05D012943 ORTHO05D039056 1.0e-93 347.4 278 68.0
BcaC08g43129 Brassica carinata HOM05D012943 ORTHO05D039056 1.3e-59 234.2 179 69.8
BcaC01g02092 Brassica carinata HOM05D012943 ORTHO05D091808 7.1e-58 228.4 174 78.7
BcaB07g33136 Brassica carinata HOM05D012943 ORTHO05D094356 5.6e-55 218.8 202 59.9
BcaB07g33163 Brassica carinata HOM05D012943 ORTHO05D027589 1.2e-36 157.9 99 76.8
BcaB07g33162 Brassica carinata HOM05D012943 ORTHO05D010571 3.2e-34 149.8 145 60.0
BcaB04g17782 Brassica carinata HOM05D012943 ORTHO05D091829 2.7e-33 146.7 141 59.6
BcaB06g27016 Brassica carinata HOM05D012943 ORTHO05D093937 3.6e-33 146.4 258 38.8
BcaB04g17042 Brassica carinata HOM05D012943 ORTHO05D092635 1.3e-27 127.9 130 58.5
A06p28400 Brassica napus HOM05D001224 ORTHO05D012331 3.2e-26 123.2 291 32.0
BcaC04g19844 Brassica carinata HOM05D001224 ORTHO05D012331 5.1e-24 115.9 273 32.6
BraA06t25784Z Brassica rapa HOM05D001224 ORTHO05D012331 2.0e-23 114.0 239 33.9
BolC9t57112H Brassica oleracea HOM05D001224 ORTHO05D012331 1.7e-22 110.9 251 32.3
BcaC06g35068 Brassica carinata HOM05D002776 ORTHO05D012331 2.8e-22 110.2 263 31.9
C09p42330 Brassica napus HOM05D001224 ORTHO05D012331 2.8e-22 110.2 240 33.3
C04p09810 Brassica napus HOM05D002702 ORTHO05D003416 7.7e-20 102.1 290 29.7
BolC4t22590H Brassica oleracea HOM05D002776 ORTHO05D016111 7.7e-20 102.1 290 29.7
BcaB08g35070 Brassica carinata HOM05D001224 ORTHO05D010571 1.7e-19 100.9 228 33.8
C03p71030 Brassica napus HOM05D001224 ORTHO05D016111 6.5e-19 99.0 289 30.1
BcaC06g36430 Brassica carinata HOM05D001224 ORTHO05D039145 8.5e-19 98.6 292 28.8
BolC3t19387H Brassica oleracea HOM05D001224 ORTHO05D016111 1.4e-18 97.8 262 32.4
C07p04250 Brassica napus HOM05D001224 ORTHO05D039145 5.5e-18 95.9 287 28.9
BcaB06g26680 Brassica carinata HOM05D001224 ORTHO05D018563 7.2e-18 95.5 291 27.8
BcaB05g22950 Brassica carinata HOM05D001224 ORTHO05D018563 2.1e-17 94.0 149 36.9
C07p05350 Brassica napus HOM05D001224 ORTHO05D012331 2.7e-17 93.6 92 53.3
C04p09720 Brassica napus HOM05D001224 ORTHO05D016111 3.6e-17 93.2 257 30.7
C02p39480 Brassica napus HOM05D001224 ORTHO05D003044 1.8e-16 90.9 69 63.8
BcaB02g10769 Brassica carinata HOM05D002776 ORTHO05D012331 1.1e-15 88.2 150 39.3
BcaB06g26317 Brassica carinata HOM05D001224 ORTHO05D010571 3.3e-15 86.7 295 28.1
BcaB02g11218 Brassica carinata HOM05D001224 ORTHO05D010571 5.7e-15 85.9 291 28.5
C07p13910 Brassica napus HOM05D001224 ORTHO05D012331 1.3e-14 84.7 266 27.1
BcaB03g16625 Brassica carinata HOM05D001224 ORTHO05D095114 1.1e-13 81.6 197 31.5
BcaB03g16071 Brassica carinata HOM05D001224 ORTHO05D095856 4.5e-12 76.3 215 29.3
BcaB03g16627 Brassica carinata HOM05D001224 ORTHO05D018563 3.8e-11 73.2 283 25.1
BraA07t28368Z Brassica rapa HOM05D001224 ORTHO05D003542 8.5e-11 72.0 69 53.6
BcaB02g11186 Brassica carinata HOM05D001224 ORTHO05D092062 1.5e-10 71.2 189 29.6
BcaB05g22878 Brassica carinata HOM05D001224 ORTHO05D018563 1.5e-10 71.2 128 35.9
C07p06950 Brassica napus HOM05D001224 ORTHO05D003044 1.5e-10 71.2 69 53.6
BcaB01g01200 Brassica carinata HOM05D001224 ORTHO05D018563 1.9e-10 70.9 124 36.3
BcaB04g16978 Brassica carinata HOM05D001224 ORTHO05D018563 1.9e-10 70.9 123 35.8
BcaC03g16637 Brassica carinata HOM05D012943 ORTHO05D027387 2.5e-10 70.5 147 47.6
BcaB07g33214 Brassica carinata HOM05D001224 ORTHO05D018563 5.5e-10 69.3 302 25.2
BcaC06g36171 Brassica carinata HOM05D001224 ORTHO05D014478 7.2e-10 68.9 123 37.4
BcaC08g43834 Brassica carinata HOM05D001224 ORTHO05D014478 1.2e-09 68.2 69 52.2
BcaC08g44195 Brassica carinata HOM05D001224 ORTHO05D014478 1.2e-09 68.2 75 49.3
C05p44360 Brassica napus HOM05D001224 ORTHO05D014478 1.2e-09 68.2 151 37.7
C07p01210 Brassica napus HOM05D001224 ORTHO05D003044 1.2e-09 68.2 69 52.2
BolC1t04761H Brassica oleracea HOM05D001224 ORTHO05D003542 1.2e-09 68.2 69 52.2
BolC6t36797H Brassica oleracea HOM05D001224 ORTHO05D003044 1.6e-09 67.8 69 53.6
BcaC02g12294 Brassica carinata HOM05D001224 ORTHO05D014478 2.1e-09 67.4 152 36.8
C04p05510 Brassica napus HOM05D001224 ORTHO05D003542 2.1e-09 67.4 152 36.8
C01p45390 Brassica napus HOM05D001224 ORTHO05D003044 3.6e-09 66.6 151 37.1
C07p12000 Brassica napus HOM05D001224 ORTHO05D003542 4.7e-09 66.2 152 36.8
BcaB01g01374 Brassica carinata HOM05D001224 ORTHO05D018563 8.0e-09 65.5 122 33.6
C06p26600 Brassica napus HOM05D001224 ORTHO05D014478 8.0e-09 65.5 69 52.2
C07p01170 Brassica napus HOM05D001224 ORTHO05D003044 8.0e-09 65.5 151 33.8
BcaC05g28169 Brassica carinata HOM05D001224 ORTHO05D003044 1.0e-08 65.1 159 34.6
C05p42050 Brassica napus HOM05D001224 ORTHO05D003044 1.0e-08 65.1 159 34.6
C07p00680 Brassica napus HOM05D001224 ORTHO05D003542 1.4e-08 64.7 151 36.4
C03p58290 Brassica napus HOM05D001224 ORTHO05D003542 1.8e-08 64.3 69 50.7
C04p55400 Brassica napus HOM05D001224 ORTHO05D003542 2.3e-08 63.9 151 35.8
BcaC05g28451 Brassica carinata HOM05D001224 ORTHO05D014478 3.0e-08 63.5 151 36.4
BolC4t26388H Brassica oleracea HOM05D001224 ORTHO05D000395 3.0e-08 63.5 152 36.8
BcaB04g17428 Brassica carinata HOM05D002776 ORTHO05D091936 6.7e-08 62.4 57 56.1
BcaB04g17485 Brassica carinata HOM05D001224 ORTHO05D019989 6.7e-08 62.4 248 27.4
BraA03t15286Z Brassica rapa HOM05D001224 ORTHO05D018692 1.2e-07 61.6 69 47.8
A03p65940 Brassica napus HOM05D002776 ORTHO05D003044 2.0e-07 60.8 56 51.8
BolC5t32336H Brassica oleracea HOM05D001224 ORTHO05D018692 2.0e-07 60.8 69 47.8
BcaC02g09037 Brassica carinata HOM05D001224 ORTHO05D014478 2.6e-07 60.5 148 35.8
C01p38730 Brassica napus HOM05D001224 ORTHO05D012331 2.6e-07 60.5 239 24.7
A09p33400 Brassica napus HOM05D002776 ORTHO05D003044 3.3e-07 60.1 56 51.8
BraA09t38883Z Brassica rapa HOM05D002776 ORTHO05D003044 3.3e-07 60.1 56 51.8
BraA01t02476Z Brassica rapa HOM05D001224 ORTHO05D003542 4.4e-07 59.7 64 48.4
BraA03t15291Z Brassica rapa HOM05D002776 ORTHO05D000395 4.4e-07 59.7 138 34.8
BcaB01g01307 Brassica carinata HOM05D002776 ORTHO05D003044 9.7e-07 58.5 56 51.8
BcaB03g16806 Brassica carinata HOM05D002776 ORTHO05D003044 9.7e-07 58.5 56 51.8
BcaC05g26849 Brassica carinata HOM05D001224 ORTHO05D014478 9.7e-07 58.5 67 46.3
BolC8t49590H Brassica oleracea HOM05D001224 ORTHO05D003044 9.7e-07 58.5 50 56.0
BraA09t40150Z Brassica rapa HOM05D002776 ORTHO05D011320 9.7e-07 58.5 140 33.6
A08p09940 Brassica napus HOM05D002776 ORTHO05D003044 1.3e-06 58.2 56 51.8
A10p06820 Brassica napus HOM05D002776 ORTHO05D003044 1.7e-06 57.8 115 36.5
BraA01t01978Z Brassica rapa HOM05D002776 ORTHO05D003044 1.7e-06 57.8 115 36.5
A08p08130 Brassica napus HOM05D002776 ORTHO05D003044 2.2e-06 57.4 115 35.7
C04p18100 Brassica napus HOM05D033568 ORTHO05D027387 2.2e-06 57.4 34 76.5
C05p27320 Brassica napus HOM05D001224 ORTHO05D003044 2.8e-06 57.0 58 51.7
A01p28530 Brassica napus HOM05D002776 ORTHO05D003044 4.8e-06 56.2 45 60.0
C03p44580 Brassica napus HOM05D002776 ORTHO05D003044 4.8e-06 56.2 56 50.0
BolC5t33261H Brassica oleracea HOM05D001224 ORTHO05D014478 4.8e-06 56.2 144 35.4
BcaB08g35015 Brassica carinata HOM05D002776 ORTHO05D011320 6.3e-06 55.8 53 52.8
BraA03t15647Z Brassica rapa HOM05D002776 ORTHO05D003044 6.3e-06 55.8 48 54.2
BolC4t23615H Brassica oleracea HOM05D001224 ORTHO05D003044 8.2e-06 55.5 57 50.9


User provided reference genes

Program Settings