Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p06990 Brassica napus HOM05D009356 ORTHO05D010353 3.8e-249 864.4 435 100.0
C02p15580 Brassica napus HOM05D009356 ORTHO05D010353 5.9e-218 760.8 451 86.5
C04p15140 Brassica napus HOM05D009356 ORTHO05D010353 1.7e-209 732.6 438 84.0
BcaC02g10021 Brassica carinata HOM05D009356 ORTHO05D010353 5.4e-195 684.5 406 86.7
BcaC05g26363 Brassica carinata HOM05D009356 ORTHO05D010353 9.8e-173 610.5 406 78.8
C02p25050 Brassica napus HOM05D009356 ORTHO05D010353 9.5e-168 594.0 310 94.8
BcaC03g14879 Brassica carinata HOM05D009356 ORTHO05D010353 4.3e-160 568.5 407 71.0
BcaC04g22051 Brassica carinata HOM05D009356 ORTHO05D010353 4.8e-151 538.5 406 71.7
BcaC05g28711 Brassica carinata HOM05D009356 ORTHO05D010353 9.0e-134 481.1 417 63.3
C07p25740 Brassica napus HOM05D009356 ORTHO05D010353 6.5e-92 342.0 193 87.0
BcaC02g11800 Brassica carinata HOM05D009356 ORTHO05D010353 4.0e-81 306.2 194 84.5
BcaC02g11799 Brassica carinata HOM05D009356 ORTHO05D010353 9.1e-78 295.0 166 84.9
Sp6g09590 Schrenkiella parvula HOM05D009356 ORTHO05D010353 3.0e-60 236.9 406 35.0
BcaC05g27052 Brassica carinata HOM05D009356 ORTHO05D010353 2.9e-47 193.7 373 30.6
BcaB08g35697 Brassica carinata HOM05D009356 ORTHO05D010353 8.6e-44 182.2 220 38.2
BcaB04g17676 Brassica carinata HOM05D009356 ORTHO05D010353 1.2e-32 145.2 222 31.1
Sp3g26020 Schrenkiella parvula HOM05D009356 ORTHO05D011005 4.2e-30 136.7 409 26.4
Sp1g28960 Schrenkiella parvula HOM05D009356 ORTHO05D010353 4.3e-27 126.7 256 31.2
BcaB08g35272 Brassica carinata HOM05D009356 ORTHO05D010353 7.3e-27 125.9 172 35.5
AL9U11180 Arabidopsis lyrata HOM05D003849 ORTHO05D002482 2.1e-26 124.4 256 29.3
AL126U10020 Arabidopsis lyrata HOM05D009356 ORTHO05D006373 8.1e-26 122.5 334 28.4
AL2G19060 Arabidopsis lyrata HOM05D003849 ORTHO05D002482 8.1e-26 122.5 256 29.7
AL3G34330 Arabidopsis lyrata HOM05D009356 ORTHO05D006373 1.8e-25 121.3 333 27.9
SpUn0005_0080 Schrenkiella parvula HOM05D007883 ORTHO05D010332 2.6e-24 117.5 296 28.7
Sp7g10380 Schrenkiella parvula HOM05D009356 ORTHO05D011005 2.9e-23 114.0 320 27.5
Sp2g06700 Schrenkiella parvula HOM05D009356 ORTHO05D010353 3.0e-20 104.0 133 36.8
Sp6g08840 Schrenkiella parvula HOM05D007883 ORTHO05D010332 9.6e-19 99.0 281 29.2
AL7G49440 Arabidopsis lyrata HOM05D003849 ORTHO05D002482 9.0e-17 92.4 256 26.2
SpUn0056_0010 Schrenkiella parvula HOM05D007883 ORTHO05D010332 3.4e-16 90.5 234 31.2
SpUn0075_0010 Schrenkiella parvula HOM05D007883 ORTHO05D010332 1.0e-15 89.0 227 31.7
Sp5g17470 Schrenkiella parvula HOM05D009356 ORTHO05D010353 1.7e-15 88.2 135 35.6
Sp2g06710 Schrenkiella parvula HOM05D009356 ORTHO05D010353 2.7e-13 80.9 141 31.2
SpUn0002_0360 Schrenkiella parvula HOM05D007883 ORTHO05D010332 2.3e-12 77.8 343 24.2
C03p52910 Brassica napus HOM05D009244 ORTHO05D010353 4.3e-11 73.6 87 52.9
BolC1t02265H Brassica oleracea HOM05D009244 ORTHO05D010353 4.3e-11 73.6 87 52.9
TPR.G14519 Trifolium pratense HOM05D014681 ORTHO05D006373 4.3e-11 73.6 151 30.5
AUR62044633 Chenopodium quinoa HOM05D008347 ORTHO05D006373 7.4e-11 72.8 260 25.4
BolC2t10309H Brassica oleracea HOM05D009244 ORTHO05D010353 9.6e-11 72.4 87 51.7
BolC8t48248H Brassica oleracea HOM05D009244 ORTHO05D010353 1.3e-10 72.0 87 51.7
Sp3g27220 Schrenkiella parvula HOM05D007883 ORTHO05D010332 1.6e-10 71.6 112 34.8
C09p53630 Brassica napus HOM05D009244 ORTHO05D010353 2.1e-10 71.2 87 51.7
C07p27320 Brassica napus HOM05D009244 ORTHO05D010353 3.7e-10 70.5 89 50.6
BcaC03g16457 Brassica carinata HOM05D003849 ORTHO05D017533 4.8e-10 70.1 314 22.9
C04p35530 Brassica napus HOM05D009244 ORTHO05D010353 4.8e-10 70.1 97 48.5
BolC4t25108H Brassica oleracea HOM05D009244 ORTHO05D010353 4.8e-10 70.1 97 48.5
AUR62044448 Chenopodium quinoa HOM05D005322 ORTHO05D011763 4.8e-10 70.1 288 24.0
EL10Ac3g07114 Beta vulgaris HOM05D009952 ORTHO05D011763 6.3e-10 69.7 233 27.0
AUR62024387 Chenopodium quinoa HOM05D008347 ORTHO05D006373 6.3e-10 69.7 160 30.0
Sp7g06380 Schrenkiella parvula HOM05D006786 ORTHO05D011005 6.3e-10 69.7 304 25.3
AUR62013905 Chenopodium quinoa HOM05D008347 ORTHO05D006373 8.2e-10 69.3 158 28.5
C07p06480 Brassica napus HOM05D009244 ORTHO05D010353 1.1e-09 68.9 87 50.6
C07p45910 Brassica napus HOM05D009244 ORTHO05D010353 1.1e-09 68.9 87 50.6
BolC7t45111H Brassica oleracea HOM05D009244 ORTHO05D010353 1.1e-09 68.9 87 50.6
C04p33870 Brassica napus HOM05D009244 ORTHO05D010353 1.8e-09 68.2 87 50.6
BolC4t24953H Brassica oleracea HOM05D009244 ORTHO05D010353 1.8e-09 68.2 87 50.6
AUR62034995 Chenopodium quinoa HOM05D000107 ORTHO05D011763 1.8e-09 68.2 290 24.8
C03p53340 Brassica napus HOM05D009244 ORTHO05D010353 2.4e-09 67.8 87 49.4
BolC1t03995H Brassica oleracea HOM05D009244 ORTHO05D010353 3.1e-09 67.4 87 49.4
Sp3g25040 Schrenkiella parvula HOM05D007883 ORTHO05D010332 3.1e-09 67.4 121 35.5
THA.LOC104820475 Tarenaya hassleriana HOM05D008347 ORTHO05D006373 3.1e-09 67.4 152 27.6
EL10Ac7g17386 Beta vulgaris HOM05D009474 ORTHO05D006373 5.3e-09 66.6 158 27.8
C01p49280 Brassica napus HOM05D009244 ORTHO05D010353 9.0e-09 65.9 95 47.4
C02p56370 Brassica napus HOM05D009244 ORTHO05D010353 9.0e-09 65.9 96 46.9
BolC1t04887H Brassica oleracea HOM05D009244 ORTHO05D010353 9.0e-09 65.9 95 47.4
BolC2t11695H Brassica oleracea HOM05D009244 ORTHO05D010353 9.0e-09 65.9 96 46.9
AUR62022722 Chenopodium quinoa HOM05D008347 ORTHO05D006373 9.0e-09 65.9 158 27.8
VMungo1299G0001 Vigna mungo HOM05D008347 ORTHO05D006373 1.5e-08 65.1 168 23.2
EL10Ac3g05933 Beta vulgaris HOM05D009952 ORTHO05D011763 2.0e-08 64.7 169 28.4
BcaC03g17256 Brassica carinata HOM05D025164 ORTHO05D019894 2.0e-08 64.7 231 24.2
C05p23960 Brassica napus HOM05D009244 ORTHO05D010353 2.0e-08 64.7 87 48.3
BolC3t20179H Brassica oleracea HOM05D009244 ORTHO05D010353 2.0e-08 64.7 87 48.3
C09p16900 Brassica napus HOM05D009244 ORTHO05D010353 2.6e-08 64.3 87 47.1
BolC2t10137H Brassica oleracea HOM05D009244 ORTHO05D010353 2.6e-08 64.3 85 47.1
BolC7t43094H Brassica oleracea HOM05D009244 ORTHO05D010353 2.6e-08 64.3 89 49.4
AL3G44170 Arabidopsis lyrata HOM05D024197 ORTHO05D006373 3.4e-08 63.9 242 26.0
C03p53580 Brassica napus HOM05D009244 ORTHO05D010353 4.5e-08 63.5 87 48.3
BolC3t17618H Brassica oleracea HOM05D009244 ORTHO05D010353 4.5e-08 63.5 87 48.3
Aa31LG4G12890 Aethionema arabicum HOM05D007652 ORTHO05D002482 5.9e-08 63.2 267 24.3
Aa31sc154G30 Aethionema arabicum HOM05D007652 ORTHO05D002482 5.9e-08 63.2 267 24.3
Aa31sc482G30 Aethionema arabicum HOM05D007652 ORTHO05D002482 5.9e-08 63.2 267 24.3
C07p17260 Brassica napus HOM05D009244 ORTHO05D010353 5.9e-08 63.2 87 47.1
BolC9t55327H Brassica oleracea HOM05D009244 ORTHO05D010353 5.9e-08 63.2 87 47.1
AUR62042837 Chenopodium quinoa HOM05D005322 ORTHO05D011763 5.9e-08 63.2 280 24.6
A01p25780 Brassica napus HOM05D009244 ORTHO05D010353 7.6e-08 62.8 87 47.1
BolC5t31134H Brassica oleracea HOM05D009244 ORTHO05D010353 1.0e-07 62.4 87 47.1
SpUn0192_0010 Schrenkiella parvula HOM05D007883 ORTHO05D010332 1.0e-07 62.4 172 29.1
C03p84790 Brassica napus HOM05D009244 ORTHO05D010353 1.3e-07 62.0 29 93.1
BolC3t20768H Brassica oleracea HOM05D009244 ORTHO05D010353 1.3e-07 62.0 29 93.1
TPR.G36100 Trifolium pratense HOM05D014681 ORTHO05D006373 1.3e-07 62.0 229 22.3
Aa31sc773G20 Aethionema arabicum HOM05D007652 ORTHO05D002482 2.9e-07 60.8 370 22.7
BolC1t01431H Brassica oleracea HOM05D009244 ORTHO05D010353 2.9e-07 60.8 93 45.2
Sp3g26400 Schrenkiella parvula HOM05D007883 ORTHO05D010332 3.8e-07 60.5 123 28.5
Ah.02g119300 Amaranthus hybridus HOM05D009559 ORTHO05D006373 5.0e-07 60.1 245 21.6
EL10Ac5g11398 Beta vulgaris HOM05D009952 ORTHO05D011763 5.0e-07 60.1 170 27.1
BcaB06g26813 Brassica carinata HOM05D012753 ORTHO05D010353 6.5e-07 59.7 205 23.4
Sp5g19630 Schrenkiella parvula HOM05D007883 ORTHO05D010332 6.5e-07 59.7 157 31.8
Ah.11g040720 Amaranthus hybridus HOM05D009559 ORTHO05D006373 8.4e-07 59.3 171 25.1
Ah.10g025060 Amaranthus hybridus HOM05D020495 ORTHO05D017251 1.9e-06 58.2 162 24.1
SpUn0032_0080 Schrenkiella parvula HOM05D007883 ORTHO05D010332 1.9e-06 58.2 122 36.1
SpUn0459_0010 Schrenkiella parvula HOM05D007883 ORTHO05D010332 1.9e-06 58.2 115 31.3
VMungo0251G1913 Vigna mungo HOM05D008347 ORTHO05D006373 1.9e-06 58.2 152 23.7
BraA08t32885Z Brassica rapa HOM05D009244 ORTHO05D010353 3.2e-06 57.4 87 44.8
Sp4g07660 Schrenkiella parvula HOM05D007883 ORTHO05D010332 4.2e-06 57.0 86 32.6
SpUn0125_0010 Schrenkiella parvula HOM05D007883 ORTHO05D010332 9.3e-06 55.8 79 35.4


User provided reference genes

Program Settings