Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p06230 Brassica napus HOM05D008414 ORTHO05D014108 2.7e-49 198.4 101 100.0
BcaC06g36228 Brassica carinata HOM05D001498 ORTHO05D008559 4.3e-31 137.9 76 92.1
BolC7t41040H Brassica oleracea HOM05D008414 ORTHO05D014108 1.8e-29 132.5 76 89.5
BcaC04g20543 Brassica carinata HOM05D008414 ORTHO05D014108 2.4e-29 132.1 173 49.1
C09p42300 Brassica napus HOM05D008414 ORTHO05D014108 2.4e-29 132.1 173 49.1
BolC9t57108H Brassica oleracea HOM05D008414 ORTHO05D033115 9.0e-29 130.2 101 73.3
BcaC06g35065 Brassica carinata HOM05D008414 ORTHO05D014108 1.2e-28 129.8 173 48.6
BcaC06g35525 Brassica carinata HOM05D008414 ORTHO05D014108 1.5e-28 129.4 173 48.0
C07p13930 Brassica napus HOM05D008414 ORTHO05D014108 1.5e-28 129.4 173 48.0
BolC7t40818H Brassica oleracea HOM05D008414 ORTHO05D032445 4.5e-28 127.9 166 47.6
C07p04240 Brassica napus HOM05D008414 ORTHO05D032445 1.0e-27 126.7 166 47.0
BolC3t18883H Brassica oleracea HOM05D008414 ORTHO05D039896 2.2e-27 125.6 165 46.7
C07p05320 Brassica napus HOM05D008414 ORTHO05D033195 6.5e-27 124.0 101 70.3
C09p45510 Brassica napus HOM05D008414 ORTHO05D032461 6.5e-27 124.0 104 66.3
BolC7t40932H Brassica oleracea HOM05D008414 ORTHO05D033195 6.5e-27 124.0 101 70.3
BcaC04g20282 Brassica carinata HOM05D008414 ORTHO05D032461 2.7e-25 118.6 114 60.5
C02p39460 Brassica napus HOM05D008414 ORTHO05D014108 6.1e-25 117.5 167 46.1
BolC2t09959H Brassica oleracea HOM05D008414 ORTHO05D033195 1.0e-24 116.7 95 69.5
C01p38760 Brassica napus HOM05D008414 ORTHO05D033115 3.9e-24 114.8 93 71.0
BolC1t03833H Brassica oleracea HOM05D008414 ORTHO05D033115 3.9e-24 114.8 93 71.0
BolC9t57420H Brassica oleracea HOM05D008414 ORTHO05D032461 3.9e-24 114.8 114 59.6
BolC3t19181H Brassica oleracea HOM05D008414 ORTHO05D008559 6.7e-24 114.0 80 73.8
C03p69240 Brassica napus HOM05D008414 ORTHO05D008559 8.8e-24 113.6 74 77.0
C03p66100 Brassica napus HOM05D008414 ORTHO05D003542 2.5e-23 112.1 74 75.7
BolC7t41775H Brassica oleracea HOM05D008414 ORTHO05D032311 1.3e-22 109.8 74 74.3
BcaC06g35619 Brassica carinata HOM05D008414 ORTHO05D032311 3.7e-22 108.2 74 73.0
C07p12910 Brassica napus HOM05D008414 ORTHO05D032311 3.7e-22 108.2 74 73.0
BraA01t02473Z Brassica rapa HOM05D008414 ORTHO05D022023 4.8e-22 107.8 182 39.0
BcaB02g10766 Brassica carinata HOM05D008414 ORTHO05D014108 6.3e-22 107.5 159 46.5
BcaC09g48601 Brassica carinata HOM05D001498 ORTHO05D008559 2.2e-19 99.0 161 40.4
BcaB07g33085 Brassica carinata HOM05D001498 ORTHO05D095625 8.5e-19 97.1 75 61.3
BcaB07g33218 Brassica carinata HOM05D008414 ORTHO05D014108 5.5e-18 94.4 74 60.8
BcaB06g26479 Brassica carinata HOM05D008414 ORTHO05D014108 2.1e-17 92.4 80 57.5
BcaB06g26761 Brassica carinata HOM05D008414 ORTHO05D091670 2.1e-17 92.4 75 58.7
BcaB04g18489 Brassica carinata HOM05D008414 ORTHO05D092295 2.7e-17 92.0 75 57.3
BcaB07g33316 Brassica carinata HOM05D008414 ORTHO05D092176 2.7e-17 92.0 75 58.7
BcaB03g16624 Brassica carinata HOM05D008414 ORTHO05D095320 3.6e-17 91.7 168 37.5
BcaB05g23245 Brassica carinata HOM05D008414 ORTHO05D095473 1.0e-16 90.1 98 51.0
BolC4t23821H Brassica oleracea HOM05D008414 ORTHO05D014108 1.4e-16 89.7 152 38.8
BraSC37t46119Z Brassica rapa HOM05D008414 ORTHO05D022023 1.4e-16 89.7 97 49.5
BcaB06g27026 Brassica carinata HOM05D008414 ORTHO05D090558 2.3e-16 89.0 98 50.0
C04p09830 Brassica napus HOM05D008414 ORTHO05D014108 2.3e-16 89.0 83 60.2
BcaB03g16772 Brassica carinata HOM05D008414 ORTHO05D014108 3.0e-16 88.6 101 54.5
BcaB06g26481 Brassica carinata HOM05D008414 ORTHO05D094346 3.0e-16 88.6 80 56.2
BcaB02g11314 Brassica carinata HOM05D008414 ORTHO05D094225 1.1e-15 86.7 165 35.2
BcaB03g16287 Brassica carinata HOM05D008414 ORTHO05D094276 2.6e-15 85.5 74 55.4
BcaC06g35693 Brassica carinata HOM05D001498 ORTHO05D008559 1.3e-14 83.2 92 50.0
BcaB06g27204 Brassica carinata HOM05D001498 ORTHO05D008559 2.8e-14 82.0 128 42.2
BcaC06g36431 Brassica carinata HOM05D008414 ORTHO05D032445 4.1e-13 78.2 135 40.0
BcaC09g48840 Brassica carinata HOM05D001498 ORTHO05D008559 7.0e-13 77.4 158 36.1
BcaC01g02360 Brassica carinata HOM05D008414 ORTHO05D039896 7.7e-12 73.9 134 38.1
BcaC04g19842 Brassica carinata HOM05D001498 ORTHO05D008559 1.9e-10 69.3 94 48.9
BcaB05g23794 Brassica carinata HOM05D001498 ORTHO05D008559 1.0e-08 63.5 58 58.6
BcaC01g02039 Brassica carinata HOM05D008414 ORTHO05D008559 1.5e-07 59.7 43 72.1
BcaNung05285 Brassica carinata HOM05D008414 ORTHO05D014108 1.5e-07 59.7 42 66.7
A08p08860 Brassica napus HOM05D008414 ORTHO05D022023 5.7e-07 57.8 36 80.6
C05p45420 Brassica napus HOM05D008414 ORTHO05D022023 5.7e-07 57.8 36 80.6
C07p06910 Brassica napus HOM05D008414 ORTHO05D022023 5.7e-07 57.8 36 80.6
BcaB01g01255 Brassica carinata HOM05D008414 ORTHO05D092194 1.7e-06 56.2 37 73.0
BcaB01g01185 Brassica carinata HOM05D001498 ORTHO05D019959 3.7e-06 55.1 65 40.0
BolC5t31266H Brassica oleracea HOM05D001498 ORTHO05D019959 6.3e-06 54.3 65 41.5
C04p05490 Brassica napus HOM05D008414 ORTHO05D022023 8.2e-06 53.9 44 56.8


User provided reference genes

Program Settings