Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p06030 Brassica napus HOM05D004231 ORTHO05D004814 2.7e-195 685.3 371 100.0
BcaB03g16478 Brassica carinata HOM05D004231 ORTHO05D004814 1.1e-193 679.9 371 99.2
BolC7t41016H Brassica oleracea HOM05D004231 ORTHO05D004814 1.1e-193 679.9 371 99.2
A07p03760 Brassica napus HOM05D004231 ORTHO05D004814 1.5e-193 679.5 371 98.9
BraA07t28164Z Brassica rapa HOM05D004231 ORTHO05D004814 1.5e-193 679.5 371 98.9
C09p13290 Brassica napus HOM05D004231 ORTHO05D004814 7.8e-187 657.1 371 95.1
BolC9t54222H Brassica oleracea HOM05D004231 ORTHO05D004814 1.7e-186 656.0 371 94.9
Sp3g30610 Schrenkiella parvula HOM05D004231 ORTHO05D004814 2.3e-186 655.6 371 94.9
BcaB03g16474 Brassica carinata HOM05D004231 ORTHO05D004814 8.6e-186 653.7 370 95.9
A09p11260 Brassica napus HOM05D004231 ORTHO05D004814 8.6e-186 653.7 371 94.3
BcaC04g22982 Brassica carinata HOM05D004231 ORTHO05D004814 1.5e-185 652.9 371 94.6
BraA09t36767Z Brassica rapa HOM05D004231 ORTHO05D004814 1.9e-185 652.5 371 94.1
Thhalv10022738m.g Eutrema salsugineum HOM05D004231 ORTHO05D004814 9.6e-185 650.2 371 94.1
BcaB07g31737 Brassica carinata HOM05D004231 ORTHO05D004814 4.7e-184 647.9 373 94.4
AL3G50130 Arabidopsis lyrata HOM05D004231 ORTHO05D004814 4.9e-181 637.9 371 92.2
AT2G17265 Arabidopsis thaliana HOM05D004231 ORTHO05D004814 7.1e-180 634.0 371 92.2
Carub.0003s3121 Capsella rubella HOM05D004231 ORTHO05D004814 9.3e-180 633.6 371 91.9
A06p34120 Brassica napus HOM05D004231 ORTHO05D004814 7.8e-179 630.6 371 91.9
C03p58080 Brassica napus HOM05D004231 ORTHO05D004814 9.6e-177 623.6 372 91.4
BolC3t18081H Brassica oleracea HOM05D004231 ORTHO05D004814 9.6e-177 623.6 372 91.4
BcaC01g02941 Brassica carinata HOM05D004231 ORTHO05D004814 1.3e-176 623.2 369 91.9
CARHR293610 Cardamine hirsuta HOM05D004231 ORTHO05D004814 4.8e-176 621.3 371 90.3
BraA06t26345Z Brassica rapa HOM05D004231 ORTHO05D004814 6.2e-176 620.9 369 91.1
Aa31LG2G14870 Aethionema arabicum HOM05D004231 ORTHO05D004814 2.2e-165 585.9 369 85.9
Carub.0007s0500 Capsella rubella HOM05D004231 ORTHO05D004814 6.0e-155 551.2 371 80.9
BcaB03g16477 Brassica carinata HOM05D004231 ORTHO05D004814 3.3e-153 545.4 296 99.0
BcaC06g36249 Brassica carinata HOM05D004231 ORTHO05D004814 1.7e-141 506.5 317 91.2
Duzib052G0175 Durio zibethinus HOM05D004231 ORTHO05D004814 3.6e-139 498.8 371 75.5
Sabra04G0139300 Salix brachista HOM05D004231 ORTHO05D004814 1.3e-136 490.3 369 74.5
Potri.009G168400 Populus trichocarpa HOM05D004231 ORTHO05D004814 8.2e-136 487.6 371 73.9
Ciclev10028700m.g Citrus clementina HOM05D004231 ORTHO05D004814 1.8e-135 486.5 365 74.0
Manes.01G017200 Manihot esculenta HOM05D004231 ORTHO05D004814 9.1e-135 484.2 367 74.7
Potri.004G207000 Populus trichocarpa HOM05D004231 ORTHO05D004814 5.9e-134 481.5 368 73.9
Thecc.02G146400 Theobroma cacao HOM05D004231 ORTHO05D004814 1.0e-133 480.7 366 73.8
FvH4_2g16830 Fragaria vesca HOM05D004231 ORTHO05D004814 1.3e-133 480.3 374 73.8
QL05p043527 Quercus lobata HOM05D004231 ORTHO05D004814 6.5e-133 478.0 373 74.0
FAN15G0610 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.4e-132 476.9 374 73.5
Lsat_1_v5_gn_8_121420 Lactuca sativa HOM05D004231 ORTHO05D004814 1.4e-132 476.9 380 72.9
TWI75G1214 Tripterygium wilfordii HOM05D004231 ORTHO05D004814 4.2e-132 475.3 372 71.0
FAN24G0296 Fragaria x ananassa HOM05D004231 ORTHO05D004814 5.5e-132 474.9 371 73.6
PGR042G2635 Punica granatum HOM05D004231 ORTHO05D004814 7.2e-132 474.6 374 70.9
CSS0007201 Camellia sinensis var. sinensis HOM05D004231 ORTHO05D004814 9.4e-132 474.2 381 72.4
MD10G1142000 Malus domestica HOM05D004231 ORTHO05D004814 9.4e-132 474.2 374 72.7
Cfa005374 Carpinus fangiana HOM05D004231 ORTHO05D004814 1.2e-131 473.8 366 74.0
RcHm_v2.0_Chr6g0280961 Rosa chinensis HOM05D004231 ORTHO05D004814 3.6e-131 472.2 374 73.3
FAN27G2171 Fragaria x ananassa HOM05D004231 ORTHO05D004814 6.1e-131 471.5 371 72.8
Solyc04g008760.3 Solanum lycopersicum HOM05D004231 ORTHO05D004814 1.8e-130 469.9 377 70.0
Sopen04g003940 Solanum pennellii HOM05D004231 ORTHO05D004814 3.9e-130 468.8 375 70.1
ClCG02G003360 Citrullus lanatus HOM05D004231 ORTHO05D004814 5.1e-130 468.4 376 71.3
HanXRQChr16g0515121 Helianthus annuus HOM05D004231 ORTHO05D004814 5.1e-130 468.4 344 76.5
PGSC0003DMG400025309 Solanum tuberosum HOM05D004231 ORTHO05D004814 8.8e-130 467.6 334 76.3
SGA_v2.0_scaffold36G14389 Striga asiatica HOM05D004231 ORTHO05D004814 8.8e-130 467.6 355 72.1
Prupe.8G180500 Prunus persica HOM05D004231 ORTHO05D004814 1.1e-129 467.2 373 71.6
CsaV3_7G001970 Cucumis sativus L. HOM05D004231 ORTHO05D004814 2.0e-129 466.5 376 71.8
MELO3C015708.2 Cucumis melo HOM05D004231 ORTHO05D004814 3.3e-129 465.7 376 71.5
Oeu005953.1 Olea europaea HOM05D004231 ORTHO05D004814 3.3e-129 465.7 360 72.8
CiPaw.06G115200 Carya illinoinensis HOM05D004231 ORTHO05D004814 4.4e-129 465.3 365 72.6
Sed0021373 Sechium edule HOM05D004231 ORTHO05D004814 7.4e-129 464.5 373 71.0
CAN.G5871.1 Capsicum annuum HOM05D004231 ORTHO05D004814 9.7e-129 464.2 376 69.4
Dinv14175 Davidia involucrata HOM05D004231 ORTHO05D004814 9.7e-129 464.2 374 71.7
MSTRG.25000 Avicennia marina HOM05D004231 ORTHO05D004814 1.7e-128 463.4 328 77.1
Actinidia17992 Actinidia chinensis HOM05D004231 ORTHO05D004814 2.2e-128 463.0 373 72.7
CANSAT25G0301 Cannabis sativa HOM05D004231 ORTHO05D004814 2.2e-128 463.0 367 71.9
Migut.N00847 Erythranthe guttata HOM05D004231 ORTHO05D004814 2.2e-128 463.0 325 76.0
Nitab4.5_0000783g0100 Nicotiana tabacum HOM05D004231 ORTHO05D004814 2.2e-128 463.0 339 76.4
Hma1.2p1_0652F.1_g195880 Hydrangea macrophylla HOM05D004231 ORTHO05D004814 6.3e-128 461.5 344 75.0
Lalb_Chr12g0208621 Lupinus albus HOM05D004231 ORTHO05D004814 1.4e-127 460.3 367 70.6
Sc08g0002160 Simmondsia chinensis HOM05D004231 ORTHO05D004814 1.8e-127 459.9 366 71.6
SalBow7G0905 Salvia bowleyana HOM05D004231 ORTHO05D004814 2.4e-127 459.5 328 76.8
SGA_v2.0_scaffold172G39001 Striga asiatica HOM05D004231 ORTHO05D004814 7.0e-127 458.0 369 69.1
Peaxi162Scf00362g00110 Petunia axillaris HOM05D004231 ORTHO05D004814 1.2e-126 457.2 322 77.0
Ah.01g009950 Amaranthus hybridus HOM05D004231 ORTHO05D004814 1.6e-126 456.8 378 69.8
ECA233G1094 Erigeron canadensis HOM05D004231 ORTHO05D004814 2.6e-126 456.1 354 72.6
CSS0030147 Camellia sinensis var. sinensis HOM05D004231 ORTHO05D004814 3.5e-126 455.7 381 69.6
Ca_10777_v3 Cicer arietinum L. HOM05D004231 ORTHO05D004814 7.7e-126 454.5 361 70.1
Sed0027682 Sechium edule HOM05D004231 ORTHO05D004814 1.7e-125 453.4 375 70.7
LjContig00081g0001175 Lotus japonicus HOM05D004231 ORTHO05D004814 3.8e-125 452.2 333 75.4
Sopen01g054320 Solanum pennellii HOM05D004231 ORTHO05D004814 5.0e-125 451.8 322 76.4
EL10Ac9g21537 Beta vulgaris HOM05D004231 ORTHO05D004814 6.5e-125 451.4 370 70.5
DCAR_006270 Daucus carota HOM05D004231 ORTHO05D004814 1.5e-124 450.3 330 76.1
Nn7g36283 Nelumbo nucifera HOM05D004231 ORTHO05D004814 1.5e-124 450.3 347 73.8
RhsimUnG0022900 Rhododendron simsii HOM05D004231 ORTHO05D004814 3.2e-124 449.1 371 68.5
CARHR243620 Cardamine hirsuta HOM05D004231 ORTHO05D004814 1.2e-123 447.2 292 83.9
CiPaw.05G093400 Carya illinoinensis HOM05D004231 ORTHO05D004814 1.6e-123 446.8 358 70.9
CDE05G2018 Ceratophyllum demersum HOM05D004231 ORTHO05D004814 1.6e-123 446.8 347 72.0
Aqoxy1G01703 Aquilegia oxysepala HOM05D004231 ORTHO05D004814 2.1e-123 446.4 376 67.6
arahy.Tifrunner.gnm1.ann1.9M6UE0 Arachis hypogaea HOM05D004231 ORTHO05D004814 2.1e-123 446.4 356 71.9
PSO782G1111 Papaver somniferum HOM05D004231 ORTHO05D004814 2.1e-123 446.4 362 69.3
arahy.Tifrunner.gnm1.ann1.3XUX0K Arachis hypogaea HOM05D004231 ORTHO05D004814 2.7e-123 446.0 352 72.2
Cc11_g00240 Coffea canephora HOM05D004231 ORTHO05D004814 2.7e-123 446.0 373 69.4
PGSC0003DMG400014663 Solanum tuberosum HOM05D000109 ORTHO05D004814 2.7e-123 446.0 322 75.2
CDE05G1267 Ceratophyllum demersum HOM05D004231 ORTHO05D004814 4.7e-123 445.3 359 69.9
Peaxi162Scf00329g00312 Petunia axillaris HOM05D004231 ORTHO05D004814 4.7e-123 445.3 352 70.2
Nn2g15251 Nelumbo nucifera HOM05D004231 ORTHO05D004814 6.1e-123 444.9 369 70.7
PSO063G5124 Papaver somniferum HOM05D004231 ORTHO05D004814 6.1e-123 444.9 362 69.3
PSO675G1855 Papaver somniferum HOM05D004231 ORTHO05D004814 1.4e-122 443.7 351 70.4
Lalb_Chr07g0189301 Lupinus albus HOM05D004231 ORTHO05D004814 2.3e-122 443.0 369 67.2
ECA236G1252 Erigeron canadensis HOM05D000103 ORTHO05D000049 3.0e-122 442.6 338 72.2
PSO541G6356 Papaver somniferum HOM05D004231 ORTHO05D004814 4.0e-122 442.2 345 71.0
Lsat_1_v5_gn_4_71321 Lactuca sativa HOM05D004231 ORTHO05D004814 8.8e-122 441.0 349 66.2
Nitab4.5_0008730g0040 Nicotiana tabacum HOM05D004231 ORTHO05D004814 8.8e-122 441.0 371 67.1
TPR.G5084 Trifolium pratense HOM05D004231 ORTHO05D004814 8.8e-122 441.0 357 68.6
Medtr5g099180 Medicago truncatula HOM05D004231 ORTHO05D004814 1.1e-121 440.7 375 67.5
Nitab4.5_0000129g0030 Nicotiana tabacum HOM05D004231 ORTHO05D004814 1.5e-121 440.3 370 67.3
TPR.G18636 Trifolium pratense HOM05D004231 ORTHO05D004814 2.0e-121 439.9 331 72.5
unitig_0.g2083 Utricularia gibba HOM05D004231 ORTHO05D004814 4.4e-121 438.7 371 67.7
Gohir.A03G170800 Gossypium hirsutum HOM05D004231 ORTHO05D004814 7.5e-121 438.0 366 68.6
AUR62013177 Chenopodium quinoa HOM05D004231 ORTHO05D004814 2.2e-120 436.4 381 68.2
Glyma.14G001000 Glycine max HOM05D004231 ORTHO05D004814 3.7e-120 435.6 321 74.8
Gorai.005G216700 Gossypium raimondii HOM05D004231 ORTHO05D004814 4.8e-120 435.3 366 68.0
Gohir.D02G193900 Gossypium hirsutum HOM05D004231 ORTHO05D004814 8.2e-120 434.5 366 68.0
Phvul.008G292300 Phaseolus vulgaris HOM05D004231 ORTHO05D004814 2.4e-119 433.0 353 70.8
MBI18_g17319_MAGBIO Magnolia biondii HOM05D004231 ORTHO05D004814 4.1e-119 432.2 373 67.0
Psat2g000800 Pisum sativum HOM05D004231 ORTHO05D004814 2.9e-117 426.0 370 65.9
Cpa.g.sc60.14 Carica papaya HOM05D004231 ORTHO05D004814 1.2e-115 420.6 371 66.8
Psat2g000680 Pisum sativum HOM05D004231 ORTHO05D004814 1.4e-114 417.2 359 67.7
SHI25239 Sapria himalayana HOM05D004231 ORTHO05D004814 3.0e-114 416.0 367 64.6
ATR0177G062 Amborella trichopoda HOM05D004231 ORTHO05D004814 7.7e-110 401.4 333 67.6
HPP92_007738 Vanilla planifolia HOM05D004231 ORTHO05D004814 1.3e-109 400.6 361 64.0
AUR62010176 Chenopodium quinoa HOM05D004231 ORTHO05D004814 2.3e-106 389.8 381 60.4
THA.LOC104807405 Tarenaya hassleriana HOM05D004231 ORTHO05D004814 7.5e-105 384.8 243 88.5
GSVIVG01023624001 Vitis vinifera HOM05D004231 ORTHO05D004814 1.7e-104 383.6 368 63.0
Os02g0831800 Oryza sativa ssp. japonica HOM05D004231 ORTHO05D004814 1.4e-103 380.6 345 62.9
Pp3c5_14900 Physcomitrium patens HOM05D004231 ORTHO05D004814 7.0e-103 378.3 329 63.8
Mapoly0173s0009 Marchantia polymorpha HOM05D004231 ORTHO05D004814 2.0e-102 376.7 326 63.8
Lj9P408T30 Lonicera japonica HOM05D004231 ORTHO05D004814 4.9e-96 355.5 247 81.0
CBR_g2798 Chara braunii HOM05D004385 ORTHO05D005245 1.8e-95 353.6 390 55.1
SMO351G0181 Selaginella moellendorffii HOM05D004231 ORTHO05D004814 7.8e-94 348.2 346 59.0
COL.COLO4_34312 Corchorus olitorius HOM05D000109 ORTHO05D000520 4.6e-86 322.4 335 57.9
MBI10_g41732_MAGBIO Magnolia biondii HOM05D004231 ORTHO05D004814 6.0e-86 322.0 297 59.3
Atru.chr5.3561 Acer truncatum HOM05D004231 ORTHO05D004814 1.8e-82 310.5 206 77.2
Cre02.g082250 Chlamydomonas reinhardtii HOM05D004231 ORTHO05D004814 2.2e-80 303.5 338 53.6
MBI15_g18193_MAGBIO Magnolia biondii HOM05D004231 ORTHO05D004814 1.1e-79 301.2 337 54.9
ATR0810G109 Amborella trichopoda HOM05D004231 ORTHO05D004814 2.3e-74 283.5 324 54.9
SEGI_38009 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 8.4e-72 275.0 242 59.9
TAR625G1260 Trochodendron aralioides HOM05D004231 ORTHO05D004814 1.9e-55 220.7 209 60.3
Cre02.g082200 Chlamydomonas reinhardtii HOM05D004231 ORTHO05D004814 6.7e-53 212.2 261 49.0
Atru.chr5.3560 Acer truncatum HOM05D004231 ORTHO05D004814 1.9e-44 184.1 143 64.3
SMO231G0001 Selaginella moellendorffii HOM05D004231 ORTHO05D004814 4.8e-43 179.5 165 58.8
Dinv20762 Davidia involucrata HOM05D004231 ORTHO05D004814 3.1e-42 176.8 130 73.1
Sabra09G0130700 Salix brachista HOM05D004231 ORTHO05D004814 3.3e-36 156.8 164 59.1
VMungo0331G0717 Vigna mungo HOM05D004231 ORTHO05D004814 1.4e-31 141.4 133 59.4
BcaB08g34718 Brassica carinata HOM05D004231 ORTHO05D004814 6.1e-30 136.0 78 91.0
TAR625G0010 Trochodendron aralioides HOM05D004231 ORTHO05D004814 3.3e-28 130.2 89 71.9
VMungo0647G1050 Vigna mungo HOM05D004231 ORTHO05D004814 8.2e-27 125.6 95 69.5
BcaB08g34717 Brassica carinata HOM05D004231 ORTHO05D004814 1.8e-26 124.4 68 89.7
SEGI_19463 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 1.3e-24 118.2 116 50.9
Actinidia26328 Actinidia chinensis HOM05D004231 ORTHO05D004814 8.5e-24 115.5 128 50.8
arahy.Tifrunner.gnm1.ann1.H05BEB Arachis hypogaea HOM05D004231 ORTHO05D004814 7.2e-23 112.5 95 62.1
BcaC06g34170 Brassica carinata HOM05D004231 ORTHO05D004814 1.6e-22 111.3 66 87.9
QL06p003747 Quercus lobata HOM05D003236 ORTHO05D003620 3.3e-20 103.6 129 45.7
QL03p013131 Quercus lobata HOM05D004231 ORTHO05D004814 2.2e-19 100.9 79 63.3
QL08p042586 Quercus lobata HOM05D004231 ORTHO05D004814 1.2e-17 95.1 87 57.5
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 1.3e-16 91.7 284 30.6
PRCOL_00006973 Prasinoderma coloniale HOM05D004231 ORTHO05D004814 1.4e-15 88.2 312 29.8
MCO14G367 Micromonas commoda HOM05D004231 ORTHO05D004814 1.9e-15 87.8 312 31.1
AT4G35295 Arabidopsis thaliana HOM05D004231 ORTHO05D004814 2.3e-13 80.9 63 69.8
BolC7t43738H Brassica oleracea HOM05D004231 ORTHO05D004814 4.8e-11 73.2 69 60.9
FAN07G1153 Fragaria x ananassa HOM05D004231 ORTHO05D004814 8.2e-11 72.4 49 69.4
C07p31950 Brassica napus HOM05D004231 ORTHO05D004814 1.4e-10 71.6 73 57.5
FAN15G0284 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.4e-10 71.6 49 69.4
TAR625G0853 Trochodendron aralioides HOM05D000369 ORTHO05D000253 2.4e-10 70.9 177 35.6
Lsat_1_v5_gn_2_1161 Lactuca sativa HOM05D004231 ORTHO05D004814 4.1e-10 70.1 59 61.0
FAN05G5401 Fragaria x ananassa HOM05D004231 ORTHO05D004814 9.1e-10 68.9 50 66.0
SEGI_37911 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 2.0e-09 67.8 52 59.6
Cre02.g082150 Chlamydomonas reinhardtii HOM05D004231 ORTHO05D004814 5.9e-09 66.2 67 50.7
FAN05G3570 Fragaria x ananassa HOM05D004231 ORTHO05D004814 5.9e-09 66.2 49 65.3
FvH4_3g29830 Fragaria vesca HOM05D004126 ORTHO05D004818 1.7e-08 64.7 44 70.5
FAN25G3338 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.7e-08 64.7 50 62.0
BcaB08g35109 Brassica carinata HOM05D004231 ORTHO05D004814 3.8e-08 63.5 43 74.4
FAN04G2646 Fragaria x ananassa HOM05D004231 ORTHO05D004814 2.5e-07 60.8 49 59.2
Ah.03g140200 Amaranthus hybridus HOM05D004231 ORTHO05D004814 3.6e-06 57.0 67 70.1
FAN23G0549 Fragaria x ananassa HOM05D004231 ORTHO05D004814 6.1e-06 56.2 80 50.0
FAN23G1162 Fragaria x ananassa HOM05D004231 ORTHO05D004814 6.1e-06 56.2 80 50.0


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