Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p05630 Brassica napus HOM05D040580 ORTHO05D031911 3.6e-129 464.9 237 100.0
BolC7t40963H Brassica oleracea HOM05D040580 ORTHO05D031911 1.6e-60 236.9 135 90.4
BcaC06g36300 Brassica carinata HOM05D000088 ORTHO05D000933 1.7e-33 147.1 111 68.5
C07p05620 Brassica napus HOM05D000171 ORTHO05D000101 1.7e-33 147.1 111 68.5
BolC7t40961H Brassica oleracea HOM05D000171 ORTHO05D000101 6.4e-33 145.2 111 67.6
BraA07t28132Z Brassica rapa HOM05D000171 ORTHO05D000101 2.7e-31 139.8 112 65.2
BraA07t27916Z Brassica rapa HOM05D000171 ORTHO05D000101 1.0e-30 137.9 110 63.6
C07p02550 Brassica napus HOM05D000171 ORTHO05D000101 3.9e-30 136.0 110 63.6
BolC7t40653H Brassica oleracea HOM05D000171 ORTHO05D000101 3.9e-30 136.0 110 63.6
BcaC06g36593 Brassica carinata HOM05D000171 ORTHO05D000101 1.5e-29 134.0 110 62.7
A09p16070 Brassica napus HOM05D000171 ORTHO05D000101 4.4e-26 122.5 111 57.7
BraA09t37243Z Brassica rapa HOM05D000171 ORTHO05D000101 4.4e-26 122.5 111 57.7
BolC7t40962H Brassica oleracea HOM05D000171 ORTHO05D000101 3.5e-23 112.8 120 61.7
A07p03320 Brassica napus HOM05D000171 ORTHO05D000101 4.6e-23 112.5 121 61.2
BraA07t28133Z Brassica rapa HOM05D000171 ORTHO05D000101 7.8e-23 111.7 123 60.2
C07p05640 Brassica napus HOM05D000171 ORTHO05D000101 1.7e-22 110.5 114 62.3
C03p58590 Brassica napus HOM05D000171 ORTHO05D000101 2.3e-22 110.2 111 52.3
BolC3t18120H Brassica oleracea HOM05D000171 ORTHO05D000101 2.3e-22 110.2 111 52.3
A07p01260 Brassica napus HOM05D000171 ORTHO05D000101 5.1e-22 109.0 84 61.9
BraA06t26306Z Brassica rapa HOM05D000171 ORTHO05D000101 2.5e-21 106.7 109 55.0
Sp1g34800 Schrenkiella parvula HOM05D000171 ORTHO05D000101 2.9e-17 93.2 148 39.9
Carub.0003s0941 Capsella rubella HOM05D000171 ORTHO05D000101 1.9e-16 90.5 113 44.2
Thhalv10003347m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.4e-16 89.0 114 49.1
Thhalv10003313m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 7.1e-16 88.6 113 48.7
Thhalv10017831m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 7.1e-16 88.6 111 51.4
BcaC09g50510 Brassica carinata HOM05D040580 ORTHO05D031911 1.3e-14 84.3 68 70.6
Carub.0001s3672 Capsella rubella HOM05D000171 ORTHO05D000101 1.3e-14 84.3 113 39.8
Thhalv10027439m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.7e-14 84.0 111 44.1
A03p18390 Brassica napus HOM05D000171 ORTHO05D000101 3.0e-14 83.2 113 42.5
BraA03t11102Z Brassica rapa HOM05D000171 ORTHO05D000101 3.0e-14 83.2 113 42.5
AL1G54130 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 5.1e-14 82.4 76 53.9
C03p21480 Brassica napus HOM05D000171 ORTHO05D000101 6.6e-14 82.0 114 43.0
BolC3t14534H Brassica oleracea HOM05D000171 ORTHO05D000101 6.6e-14 82.0 114 43.0
CARHR040900 Cardamine hirsuta HOM05D000171 ORTHO05D000101 8.7e-14 81.6 111 40.5
AT1G47790 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.3e-13 79.7 114 41.2
Thhalv10012065m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.3e-12 77.8 104 43.3
Carub.0001s3671 Capsella rubella HOM05D000171 ORTHO05D000101 1.6e-12 77.4 114 40.4
Carub.0001s3666 Capsella rubella HOM05D000171 ORTHO05D000101 2.8e-12 76.6 113 40.7
Thhalv10011993m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 6.2e-12 75.5 66 57.6
AT3G10240 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.1e-11 74.7 109 39.4
AT1G47765 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.8e-11 73.9 128 37.5
BcaB07g33527 Brassica carinata HOM05D000171 ORTHO05D000101 3.1e-11 73.2 114 36.8
CARHR037850 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.2e-10 71.2 113 36.3
AL1G54580 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.5e-10 70.9 115 37.4
BcaC08g43262 Brassica carinata HOM05D000171 ORTHO05D000101 2.0e-10 70.5 113 38.1
Carub.0001s3670 Capsella rubella HOM05D000171 ORTHO05D000101 2.0e-10 70.5 110 40.9
Thhalv10003413m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.0e-10 70.5 114 41.2
AT1G50870 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.6e-10 70.1 74 50.0
Carub.0002s1701 Capsella rubella HOM05D000171 ORTHO05D000101 3.4e-10 69.7 111 39.6
BcaB03g12738 Brassica carinata HOM05D000171 ORTHO05D000101 4.4e-10 69.3 117 37.6
CARHR037410 Cardamine hirsuta HOM05D000171 ORTHO05D000101 4.4e-10 69.3 82 43.9
BraA05t21830Z Brassica rapa HOM05D000171 ORTHO05D000101 5.8e-10 68.9 146 39.0
A05p29800 Brassica napus HOM05D000171 ORTHO05D000101 9.9e-10 68.2 105 42.9
BcaB07g33525 Brassica carinata HOM05D000171 ORTHO05D000101 1.7e-09 67.4 115 33.0
Thhalv10012002m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.7e-09 67.4 113 36.3
Thhalv10012059m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.7e-09 67.4 112 33.0
Carub.0001s3663 Capsella rubella HOM05D000171 ORTHO05D000101 2.2e-09 67.0 108 37.0
BraA05t21831Z Brassica rapa HOM05D000171 ORTHO05D000101 3.8e-09 66.2 115 36.5
A06p02840 Brassica napus HOM05D000171 ORTHO05D000101 4.9e-09 65.9 113 35.4
BraA06t23491Z Brassica rapa HOM05D000171 ORTHO05D000101 4.9e-09 65.9 113 35.4
Carub.0196s0001 Capsella rubella HOM05D000171 ORTHO05D000101 6.4e-09 65.5 75 45.3
CARHR037720 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.4e-09 65.5 113 34.5
Thhalv10011966m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 6.4e-09 65.5 116 36.2
AL3G17170 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 8.4e-09 65.1 114 37.7
C06p06060 Brassica napus HOM05D000171 ORTHO05D000101 8.4e-09 65.1 81 40.7
BolC6t35719H Brassica oleracea HOM05D000171 ORTHO05D000101 8.4e-09 65.1 81 40.7
AT1G47730 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.1e-08 64.7 113 33.6
Carub.0001s3717 Capsella rubella HOM05D000171 ORTHO05D000101 2.4e-08 63.5 110 34.5
AT3G06280 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.2e-08 63.2 113 35.4
Thhalv10029264m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.2e-08 62.8 114 36.8
Thhalv10012114m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.2e-07 61.2 127 36.2
CARHR037710 Cardamine hirsuta HOM05D000171 ORTHO05D000101 2.1e-07 60.5 113 33.6
Carub.0002s0083 Capsella rubella HOM05D000171 ORTHO05D000101 3.5e-07 59.7 90 40.0
AL6G29130 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.6e-07 59.3 112 32.1
BraA05t21817Z Brassica rapa HOM05D000171 ORTHO05D000101 4.6e-07 59.3 118 39.8
C05p33250 Brassica napus HOM05D000171 ORTHO05D000101 6.0e-07 58.9 81 39.5
BolC5t32050H Brassica oleracea HOM05D000171 ORTHO05D000101 6.0e-07 58.9 81 39.5
Thhalv10003356m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 7.9e-07 58.5 104 34.6
AL1G54620 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.0e-06 58.2 114 33.3
BcaNung05623 Brassica carinata HOM05D000171 ORTHO05D000101 1.3e-06 57.8 59 47.5
BcaB07g32429 Brassica carinata HOM05D000171 ORTHO05D000101 1.7e-06 57.4 152 30.3
Thhalv10012281m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.3e-06 57.0 115 35.7
BcaB07g32138 Brassica carinata HOM05D000171 ORTHO05D000101 3.9e-06 56.2 109 32.1
BcaB07g33521 Brassica carinata HOM05D000171 ORTHO05D000101 8.7e-06 55.1 75 40.0


User provided reference genes

Program Settings