Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p04730 Brassica napus HOM05D006142 ORTHO05D020039 2.3e-159 565.5 272 100.0
A01p22910 Brassica napus HOM05D006142 ORTHO05D020039 5.4e-137 491.1 271 89.7
BraA01t02204Z Brassica rapa HOM05D006142 ORTHO05D020039 5.4e-137 491.1 271 89.7
BraA02t07853Z Brassica rapa HOM05D006142 ORTHO05D020039 2.1e-133 479.2 283 85.5
BolC8t48132H Brassica oleracea HOM05D006142 ORTHO05D020039 5.5e-105 384.8 278 71.6
A08p07910 Brassica napus HOM05D006142 ORTHO05D027476 7.8e-59 231.5 467 34.0
BraA09t37555Z Brassica rapa HOM05D006142 ORTHO05D028221 2.9e-53 213.0 169 65.1
BcaC01g01856 Brassica carinata HOM05D006142 ORTHO05D020039 4.4e-46 189.1 322 37.9
C04p22760 Brassica napus HOM05D006142 ORTHO05D027476 8.6e-42 174.9 275 39.6
Sp7g09080 Schrenkiella parvula HOM05D006142 ORTHO05D371143 1.3e-26 124.4 388 26.5
BraA07t29488Z Brassica rapa HOM05D006142 ORTHO05D010451 8.7e-26 121.7 160 44.4
Sp3g28050 Schrenkiella parvula HOM05D006142 ORTHO05D010451 2.5e-25 120.2 357 29.4
BolC6t35991H Brassica oleracea HOM05D006142 ORTHO05D020039 3.3e-25 119.8 119 53.8
BolC7t42721H Brassica oleracea HOM05D006142 ORTHO05D010451 2.1e-24 117.1 131 48.9
BolC2t10216H Brassica oleracea HOM05D006142 ORTHO05D010451 4.0e-23 112.8 96 51.0
Sp3g26800 Schrenkiella parvula HOM05D006142 ORTHO05D010451 9.0e-23 111.7 263 30.4
C06p09180 Brassica napus HOM05D006142 ORTHO05D010451 4.5e-22 109.4 110 48.2
BcaC05g29081 Brassica carinata HOM05D006142 ORTHO05D010451 3.8e-21 106.3 89 53.9
BraA08t32811Z Brassica rapa HOM05D006142 ORTHO05D027476 1.4e-20 104.4 209 34.9
C03p71310 Brassica napus HOM05D006142 ORTHO05D010451 1.2e-19 101.3 128 43.8
Sp1g31670 Schrenkiella parvula HOM05D006142 ORTHO05D010451 3.5e-19 99.8 202 33.7
Sp7g08780 Schrenkiella parvula HOM05D006142 ORTHO05D010451 7.9e-19 98.6 240 28.3
Sp5g17870 Schrenkiella parvula HOM05D006142 ORTHO05D010451 9.6e-17 91.7 217 29.0
BcaB07g33111 Brassica carinata HOM05D006142 ORTHO05D010451 3.6e-16 89.7 62 64.5
A09p33970 Brassica napus HOM05D000017 ORTHO05D000013 9.0e-15 85.1 57 71.9
BcaC02g12101 Brassica carinata HOM05D006142 ORTHO05D010451 2.6e-14 83.6 234 29.9
C05p32190 Brassica napus HOM05D006142 ORTHO05D096968 2.6e-14 83.6 56 76.8
Sp5g17680 Schrenkiella parvula HOM05D006142 ORTHO05D371242 4.5e-14 82.8 167 31.1
BcaB05g24742 Brassica carinata HOM05D006142 ORTHO05D027476 5.8e-14 82.4 89 48.3
C04p39100 Brassica napus HOM05D000017 ORTHO05D000013 9.9e-14 81.6 57 63.2
A05p23500 Brassica napus HOM05D000017 ORTHO05D000013 1.7e-13 80.9 70 54.3
BraA04t17362Z Brassica rapa HOM05D006142 ORTHO05D043181 1.7e-13 80.9 123 40.7
Sp2g07350 Schrenkiella parvula HOM05D006142 ORTHO05D010451 2.9e-13 80.1 192 30.2
BolC2t10215H Brassica oleracea HOM05D000017 ORTHO05D000013 3.8e-13 79.7 57 63.2
C05p16980 Brassica napus HOM05D006142 ORTHO05D000013 1.1e-12 78.2 57 61.4
BolC2t09931H Brassica oleracea HOM05D000017 ORTHO05D000013 1.9e-12 77.4 70 54.3
Sp1g33280 Schrenkiella parvula HOM05D006142 ORTHO05D010451 1.9e-12 77.4 279 25.8
Sp7g09160 Schrenkiella parvula HOM05D006142 ORTHO05D010451 2.4e-12 77.0 213 29.6
C04p39380 Brassica napus HOM05D006142 ORTHO05D041830 3.2e-12 76.6 57 61.4
BolC4t25505H Brassica oleracea HOM05D006142 ORTHO05D041830 3.2e-12 76.6 57 61.4
A02p36610 Brassica napus HOM05D000017 ORTHO05D000013 4.2e-12 76.3 58 63.8
BraA02t08656Z Brassica rapa HOM05D000017 ORTHO05D000013 4.2e-12 76.3 58 63.8
Sp6g12110 Schrenkiella parvula HOM05D006142 ORTHO05D010451 4.2e-12 76.3 78 47.4
Sp7g04550 Schrenkiella parvula HOM05D006142 ORTHO05D010451 4.2e-12 76.3 85 42.4
C04p43580 Brassica napus HOM05D006142 ORTHO05D000013 1.6e-11 74.3 73 56.2
C01p14810 Brassica napus HOM05D006142 ORTHO05D000013 2.1e-11 73.9 73 54.8
BcaB08g36277 Brassica carinata HOM05D006142 ORTHO05D010451 2.7e-11 73.6 71 45.1
A01p19460 Brassica napus HOM05D000017 ORTHO05D000013 3.5e-11 73.2 58 62.1
C04p19380 Brassica napus HOM05D006142 ORTHO05D024119 3.5e-11 73.2 283 26.9
C06p36610 Brassica napus HOM05D000017 ORTHO05D000013 3.5e-11 73.2 58 62.1
BolC4t23470H Brassica oleracea HOM05D006142 ORTHO05D024119 3.5e-11 73.2 283 26.9
BolC7t42636H Brassica oleracea HOM05D000017 ORTHO05D000013 6.0e-11 72.4 66 54.5
BcaB06g25861 Brassica carinata HOM05D006142 ORTHO05D023852 2.3e-10 70.5 222 27.9
Sp7g08100 Schrenkiella parvula HOM05D006142 ORTHO05D010451 2.3e-10 70.5 62 48.4
BolC9t58661H Brassica oleracea HOM05D020035 ORTHO05D023914 3.0e-10 70.1 112 41.1
Sp4g09320 Schrenkiella parvula HOM05D006142 ORTHO05D010451 3.0e-10 70.1 226 26.5
A02p27070 Brassica napus HOM05D000017 ORTHO05D000013 6.7e-10 68.9 58 56.9
C08p03660 Brassica napus HOM05D006142 ORTHO05D010451 8.7e-10 68.6 211 28.9
C03p72500 Brassica napus HOM05D000017 ORTHO05D000013 1.1e-09 68.2 57 59.6
Sp4g08110 Schrenkiella parvula HOM05D006142 ORTHO05D010451 1.1e-09 68.2 179 29.6
Sp7g08090 Schrenkiella parvula HOM05D006142 ORTHO05D000013 1.1e-09 68.2 83 50.6
BolC6t35503H Brassica oleracea HOM05D006142 ORTHO05D000013 1.5e-09 67.8 73 52.1
BcaB01g01313 Brassica carinata HOM05D006142 ORTHO05D010451 2.5e-09 67.0 69 40.6
BcaC05g28389 Brassica carinata HOM05D006142 ORTHO05D010451 5.6e-09 65.9 51 54.9
BcaC05g29818 Brassica carinata HOM05D006142 ORTHO05D010451 5.6e-09 65.9 51 54.9
C05p60180 Brassica napus HOM05D006142 ORTHO05D010451 5.6e-09 65.9 48 54.2
BolC2t12305H Brassica oleracea HOM05D006142 ORTHO05D000013 5.6e-09 65.9 73 52.1
C04p36540 Brassica napus HOM05D006142 ORTHO05D000013 7.4e-09 65.5 72 51.4
BraA07t31230Z Brassica rapa HOM05D000017 ORTHO05D000013 7.4e-09 65.5 101 43.6
TWI18G0395 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.1e-08 63.9 60 53.3
TWI77G0713 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.1e-08 63.9 60 53.3
BolC6t36270H Brassica oleracea HOM05D006142 ORTHO05D024119 2.8e-08 63.5 161 30.4
TWI77G0635 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.8e-08 63.5 60 53.3
BcaC08g45575 Brassica carinata HOM05D006142 ORTHO05D023852 3.7e-08 63.2 243 26.3
Sp6g35200 Schrenkiella parvula HOM05D006142 ORTHO05D010451 3.7e-08 63.2 85 43.5
SpUn0094_0020 Schrenkiella parvula HOM05D006142 ORTHO05D010451 3.7e-08 63.2 81 37.0
BcaNung03606 Brassica carinata HOM05D006142 ORTHO05D024119 6.2e-08 62.4 59 45.8
BcaC02g09206 Brassica carinata HOM05D006142 ORTHO05D031894 8.1e-08 62.0 78 41.0
BolC8t48426H Brassica oleracea HOM05D006142 ORTHO05D000013 8.1e-08 62.0 69 44.9
BcaC03g14611 Brassica carinata HOM05D006142 ORTHO05D010451 1.1e-07 61.6 51 52.9
TWI59G0618 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.1e-07 61.6 55 54.5
BcaC04g18669 Brassica carinata HOM05D020035 ORTHO05D023914 1.8e-07 60.8 54 55.6
SpUn0002_0260 Schrenkiella parvula HOM05D006142 ORTHO05D010451 2.4e-07 60.5 92 37.0
A02p27280 Brassica napus HOM05D000017 ORTHO05D000013 3.1e-07 60.1 66 45.5
C05p16070 Brassica napus HOM05D006142 ORTHO05D010451 3.1e-07 60.1 51 51.0
RcHm_v2.0_Chr5g0012141 Rosa chinensis HOM05D000017 ORTHO05D000013 3.1e-07 60.1 56 57.1
Sp3g24640 Schrenkiella parvula HOM05D006142 ORTHO05D010451 4.0e-07 59.7 47 55.3
TWI39G1138 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.0e-07 59.7 66 50.0
A08p09560 Brassica napus HOM05D000017 ORTHO05D000013 5.3e-07 59.3 51 54.9
C05p37170 Brassica napus HOM05D017180 ORTHO05D000013 5.3e-07 59.3 57 50.9
C03p78180 Brassica napus HOM05D006142 ORTHO05D016090 6.9e-07 58.9 74 35.1
RcHm_v2.0_Chr7g0213551 Rosa chinensis HOM05D000017 ORTHO05D000013 6.9e-07 58.9 56 51.8
Sp5g17600 Schrenkiella parvula HOM05D006142 ORTHO05D010451 6.9e-07 58.9 47 48.9
TWI34G0976 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 6.9e-07 58.9 60 51.7
BolC7t43637H Brassica oleracea HOM05D000017 ORTHO05D000013 1.2e-06 58.2 55 49.1
TWI18G0436 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.2e-06 58.2 66 48.5
TWI63G1449 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.2e-06 58.2 66 48.5
TWI74G0719 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.2e-06 58.2 66 48.5
TWI77G0111 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.2e-06 58.2 66 48.5
TWI77G0746 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.2e-06 58.2 66 48.5
Sp3g25980 Schrenkiella parvula HOM05D006142 ORTHO05D010451 1.5e-06 57.8 68 38.2
BcaB05g22796 Brassica carinata HOM05D006142 ORTHO05D010451 2.0e-06 57.4 64 40.6
A07p43380 Brassica napus HOM05D009117 ORTHO05D024074 2.0e-06 57.4 54 53.7
C06p10560 Brassica napus HOM05D000017 ORTHO05D000013 2.0e-06 57.4 51 52.9
BolC6t36137H Brassica oleracea HOM05D000017 ORTHO05D000013 2.0e-06 57.4 51 52.9
BraA02t07753Z Brassica rapa HOM05D000017 ORTHO05D000013 2.0e-06 57.4 51 51.0
A06p16010 Brassica napus HOM05D000017 ORTHO05D000013 2.6e-06 57.0 53 49.1
C07p15550 Brassica napus HOM05D017180 ORTHO05D000013 2.6e-06 57.0 67 43.3
BolC7t42042H Brassica oleracea HOM05D017180 ORTHO05D000013 2.6e-06 57.0 67 43.3
BraA01t02124Z Brassica rapa HOM05D000017 ORTHO05D000013 2.6e-06 57.0 59 52.5
CSS0000983 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.6e-06 57.0 54 57.4
CSS0008529 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.6e-06 57.0 54 57.4
CSS0013182 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.6e-06 57.0 54 57.4
CSS0017997 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.6e-06 57.0 54 57.4
CSS0026630 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.6e-06 57.0 54 57.4
CSS0030948 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.6e-06 57.0 54 57.4
A01p24500 Brassica napus HOM05D000017 ORTHO05D000013 3.4e-06 56.6 51 52.9
C03p31490 Brassica napus HOM05D000017 ORTHO05D000013 3.4e-06 56.6 70 47.1
BolC3t15495H Brassica oleracea HOM05D000017 ORTHO05D000013 3.4e-06 56.6 70 47.1
BolC7t41625H Brassica oleracea HOM05D000017 ORTHO05D000013 3.4e-06 56.6 51 52.9
BraA03t09392Z Brassica rapa HOM05D000017 ORTHO05D000013 3.4e-06 56.6 72 47.2
CSS0012160 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 3.4e-06 56.6 54 55.6
CSS0016415 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 3.4e-06 56.6 55 54.5
FvH4_5g28463 Fragaria vesca HOM05D000017 ORTHO05D000013 3.4e-06 56.6 54 59.3
C04p36260 Brassica napus HOM05D009136 ORTHO05D011560 4.5e-06 56.2 71 45.1
CSS0015918 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 4.5e-06 56.2 55 54.5
TWI75G0826 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.5e-06 56.2 52 53.8
BcaC04g19940 Brassica carinata HOM05D006142 ORTHO05D010451 5.8e-06 55.8 38 65.8
BolC3t20080H Brassica oleracea HOM05D000005 ORTHO05D000449 5.8e-06 55.8 75 33.3
BraA08t34503Z Brassica rapa HOM05D000017 ORTHO05D000013 5.8e-06 55.8 73 43.8
CSS0000899 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 5.8e-06 55.8 54 55.6
BcaC05g26353 Brassica carinata HOM05D006142 ORTHO05D010451 7.6e-06 55.5 46 52.2
A02p37010 Brassica napus HOM05D000017 ORTHO05D000013 1.0e-05 55.1 51 51.0
BraA02t08688Z Brassica rapa HOM05D000017 ORTHO05D000013 1.0e-05 55.1 51 51.0
RcHm_v2.0_Chr7g0230091 Rosa chinensis HOM05D000017 ORTHO05D000013 1.0e-05 55.1 56 50.0


User provided reference genes

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