Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p04440 Brassica napus HOM05D000135 ORTHO05D000816 1.4e-15 85.1 41 100.0
BolC7t40838H Brassica oleracea HOM05D000135 ORTHO05D000816 1.4e-15 85.1 41 100.0
BcaB05g25001 Brassica carinata HOM05D000135 ORTHO05D000816 9.1e-12 72.4 39 82.1
BcaC08g47226 Brassica carinata HOM05D000135 ORTHO05D000816 1.2e-11 72.0 39 84.6
BraA07t31759Z Brassica rapa HOM05D000135 ORTHO05D000816 1.2e-11 72.0 39 84.6
C06p50890 Brassica napus HOM05D000135 ORTHO05D000816 1.6e-11 71.6 39 84.6
BolC6t40114H Brassica oleracea HOM05D000135 ORTHO05D000816 1.6e-11 71.6 39 84.6
A07p42310 Brassica napus HOM05D000135 ORTHO05D000816 3.5e-11 70.5 39 82.1
BcaB05g25002 Brassica carinata HOM05D000135 ORTHO05D000816 4.5e-11 70.1 39 82.1
Sp5g31800 Schrenkiella parvula HOM05D000135 ORTHO05D000816 4.5e-11 70.1 39 82.1
A02p20830 Brassica napus HOM05D000135 ORTHO05D000816 1.7e-10 68.2 39 79.5
BraA02t07114Z Brassica rapa HOM05D000135 ORTHO05D000816 1.7e-10 68.2 39 79.5
A02p20820 Brassica napus HOM05D000135 ORTHO05D000816 2.9e-10 67.4 39 79.5
BraA02t07113Z Brassica rapa HOM05D000135 ORTHO05D000816 2.9e-10 67.4 39 79.5
CARHR070200 Cardamine hirsuta HOM05D000135 ORTHO05D000816 2.9e-10 67.4 38 81.6
BcaC08g47176 Brassica carinata HOM05D000135 ORTHO05D000816 3.8e-10 67.0 39 79.5
Carub.0002s2354 Capsella rubella HOM05D000135 ORTHO05D000816 3.8e-10 67.0 39 79.5
AT1G76640 Arabidopsis thaliana HOM05D000135 ORTHO05D000816 6.5e-10 66.2 38 81.6
C02p32840 Brassica napus HOM05D000135 ORTHO05D000816 8.5e-10 65.9 39 76.9
AL2G36780 Arabidopsis lyrata HOM05D000135 ORTHO05D000816 1.5e-09 65.1 38 78.9
BcaB05g25000 Brassica carinata HOM05D000135 ORTHO05D000816 1.9e-09 64.7 39 76.9
AL4G37320 Arabidopsis lyrata HOM05D000135 ORTHO05D000816 2.5e-09 64.3 39 76.9
BcaC08g47225 Brassica carinata HOM05D000135 ORTHO05D000816 2.5e-09 64.3 38 78.9
A07p42320 Brassica napus HOM05D000135 ORTHO05D000816 2.5e-09 64.3 38 78.9
BolC6t40115H Brassica oleracea HOM05D000135 ORTHO05D000816 2.5e-09 64.3 38 78.9
BraA07t31760Z Brassica rapa HOM05D000135 ORTHO05D000816 2.5e-09 64.3 38 78.9
A07p28410 Brassica napus HOM05D000135 ORTHO05D000816 3.2e-09 63.9 38 78.9
BraA07t30478Z Brassica rapa HOM05D000135 ORTHO05D000816 3.2e-09 63.9 38 78.9
AL2G36790 Arabidopsis lyrata HOM05D000135 ORTHO05D000816 4.2e-09 63.5 38 78.9
AT1G76650 Arabidopsis thaliana HOM05D000135 ORTHO05D000816 4.2e-09 63.5 38 78.9
BcaC03g15691 Brassica carinata HOM05D000135 ORTHO05D000816 4.2e-09 63.5 39 74.4
BolC2t09413H Brassica oleracea HOM05D000135 ORTHO05D000816 4.2e-09 63.5 39 74.4
BcaC03g15692 Brassica carinata HOM05D000135 ORTHO05D000816 7.2e-09 62.8 39 74.4
BcaC08g47177 Brassica carinata HOM05D000135 ORTHO05D000816 7.2e-09 62.8 38 76.3
BolC2t09414H Brassica oleracea HOM05D000135 ORTHO05D000816 7.2e-09 62.8 39 74.4
CARHR070210 Cardamine hirsuta HOM05D000135 ORTHO05D000816 7.2e-09 62.8 38 76.3
Sp5g31810 Schrenkiella parvula HOM05D000135 ORTHO05D000816 7.2e-09 62.8 38 76.3
Thhalv10019832m.g Eutrema salsugineum HOM05D000135 ORTHO05D000816 9.4e-09 62.4 38 73.7
BcaB02g07071 Brassica carinata HOM05D000135 ORTHO05D000816 1.2e-08 62.0 38 76.3
BcaC08g45515 Brassica carinata HOM05D000135 ORTHO05D000816 1.2e-08 62.0 38 76.3
C02p32850 Brassica napus HOM05D000135 ORTHO05D000816 1.2e-08 62.0 39 74.4
C06p31870 Brassica napus HOM05D000135 ORTHO05D000816 1.2e-08 62.0 38 76.3
BolC6t38313H Brassica oleracea HOM05D000135 ORTHO05D000816 1.2e-08 62.0 38 76.3
Carub.0002s2355 Capsella rubella HOM05D000135 ORTHO05D000816 1.2e-08 62.0 38 76.3
Thhalv10019204m.g Eutrema salsugineum HOM05D000135 ORTHO05D000816 1.2e-08 62.0 38 76.3
Aa31LG4G6750 Aethionema arabicum HOM05D000135 ORTHO05D000816 2.1e-08 61.2 39 71.8
Lsat_1_v5_gn_9_1180 Lactuca sativa HOM05D000135 ORTHO05D000816 4.0e-07 57.0 39 64.1
TAR622G0710 Trochodendron aralioides HOM05D000135 ORTHO05D000816 4.0e-07 57.0 39 64.1
Dinv14818 Davidia involucrata HOM05D000135 ORTHO05D000816 5.2e-07 56.6 40 65.0
TAR622G0218 Trochodendron aralioides HOM05D000135 ORTHO05D000816 6.7e-07 56.2 38 65.8
HanXRQChr08g0207641 Helianthus annuus HOM05D000135 ORTHO05D000816 1.5e-06 55.1 39 59.0
HanXRQChr15g0474941 Helianthus annuus HOM05D000135 ORTHO05D000816 2.0e-06 54.7 38 63.2
THA.LOC104812026 Tarenaya hassleriana HOM05D000135 ORTHO05D000816 2.0e-06 54.7 38 65.8
Lsat_1_v5_gn_8_148500 Lactuca sativa HOM05D000135 ORTHO05D000816 2.6e-06 54.3 39 59.0
COL.COLO4_12261 Corchorus olitorius HOM05D000135 ORTHO05D000816 3.3e-06 53.9 38 60.5
PGR083G0560 Punica granatum HOM05D000135 ORTHO05D000816 3.3e-06 53.9 38 63.2
Ca_24507_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000816 4.4e-06 53.5 38 60.5
Prupe.3G303600 Prunus persica HOM05D000135 ORTHO05D000816 4.4e-06 53.5 39 59.0
Sabra16G0213700 Salix brachista HOM05D000135 ORTHO05D000816 4.4e-06 53.5 39 59.0
Sopen11g029410 Solanum pennellii HOM05D000135 ORTHO05D000816 4.4e-06 53.5 38 63.2
TAR629G1517 Trochodendron aralioides HOM05D000135 ORTHO05D000816 4.4e-06 53.5 39 59.0
CANSAT80G0027 Cannabis sativa HOM05D000135 ORTHO05D000816 5.7e-06 53.1 38 63.2
CANSAT80G1445 Cannabis sativa HOM05D000135 ORTHO05D000816 5.7e-06 53.1 38 63.2
FvH4_6g53150 Fragaria vesca HOM05D000135 ORTHO05D000816 5.7e-06 53.1 38 63.2
FAN02G0421 Fragaria x ananassa HOM05D000135 ORTHO05D000816 5.7e-06 53.1 38 63.2
FAN14G0778 Fragaria x ananassa HOM05D000135 ORTHO05D000816 5.7e-06 53.1 38 63.2
Lsat_1_v5_gn_8_148521 Lactuca sativa HOM05D000135 ORTHO05D000816 5.7e-06 53.1 39 59.0
Potri.001G332900 Populus trichocarpa HOM05D000135 ORTHO05D000816 5.7e-06 53.1 39 59.0
RcHm_v2.0_Chr2g0175201 Rosa chinensis HOM05D000135 ORTHO05D000816 5.7e-06 53.1 38 63.2
Sabra16G0213800 Salix brachista HOM05D000135 ORTHO05D000816 5.7e-06 53.1 39 59.0
Atru.chr13.16 Acer truncatum HOM05D000135 ORTHO05D000816 7.5e-06 52.8 38 60.5
Cpa.g.sc36.91 Carica papaya HOM05D000135 ORTHO05D000816 7.5e-06 52.8 38 60.5
CiPaw.03G053600 Carya illinoinensis HOM05D000135 ORTHO05D000816 7.5e-06 52.8 39 56.4
Lj2C97T4 Lonicera japonica HOM05D000135 ORTHO05D000816 7.5e-06 52.8 38 60.5
Lalb_Chr22g0360481 Lupinus albus HOM05D000135 ORTHO05D000816 7.5e-06 52.8 38 57.9
GSVIVG01010380001 Vitis vinifera HOM05D000135 ORTHO05D000816 7.5e-06 52.8 39 56.4
HanXRQChr09g0245721 Helianthus annuus HOM05D000135 ORTHO05D000816 9.7e-06 52.4 39 56.4
Peaxi162Scf00259g00018 Petunia axillaris HOM05D000135 ORTHO05D000816 9.7e-06 52.4 38 60.5


User provided reference genes

Program Settings