Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p03380 Brassica napus HOM05D000848 ORTHO05D033524 9.2e-181 636.7 313 100.0
BolC7t40737H Brassica oleracea HOM05D000848 ORTHO05D033524 1.9e-133 479.6 271 90.0
BcaC09g49472 Brassica carinata HOM05D000848 ORTHO05D003342 4.6e-55 219.2 450 37.6
BolC2t11819H Brassica oleracea HOM05D000848 ORTHO05D015498 2.5e-53 213.4 278 48.2
BcaB02g09790 Brassica carinata HOM05D000848 ORTHO05D003342 3.0e-46 189.9 249 46.2
BraA07t27965Z Brassica rapa HOM05D000848 ORTHO05D033524 6.4e-41 172.2 125 74.4
BolC3t20476H Brassica oleracea HOM05D000848 ORTHO05D003342 3.1e-35 153.3 257 37.4
C01p38710 Brassica napus HOM05D000848 ORTHO05D003342 6.9e-35 152.1 259 36.7
BcaB02g08198 Brassica carinata HOM05D000848 ORTHO05D003342 1.5e-34 151.0 255 36.9
C01p00830 Brassica napus HOM05D000848 ORTHO05D021910 1.3e-33 147.9 260 36.2
BolC8t52060H Brassica oleracea HOM05D000848 ORTHO05D003342 1.3e-33 147.9 260 36.2
C07p34470 Brassica napus HOM05D000848 ORTHO05D003342 2.9e-33 146.7 253 36.0
BolC7t43979H Brassica oleracea HOM05D000848 ORTHO05D003342 2.9e-33 146.7 253 36.0
C04p56700 Brassica napus HOM05D000848 ORTHO05D003342 3.8e-33 146.4 257 36.2
BolC4t27202H Brassica oleracea HOM05D000848 ORTHO05D003342 3.8e-33 146.4 257 36.2
BolC3t18271H Brassica oleracea HOM05D000848 ORTHO05D022013 2.5e-32 143.7 258 35.7
BcaC05g30229 Brassica carinata HOM05D000848 ORTHO05D003342 3.2e-32 143.3 259 37.1
A07p34870 Brassica napus HOM05D000848 ORTHO05D003342 3.5e-31 139.8 253 36.4
BraA06t24860Z Brassica rapa HOM05D000848 ORTHO05D032124 3.5e-31 139.8 253 36.4
BcaB06g25358 Brassica carinata HOM05D000848 ORTHO05D003342 6.0e-31 139.0 259 37.1
C07p58790 Brassica napus HOM05D000848 ORTHO05D003342 6.0e-31 139.0 260 31.5
BolC7t46327H Brassica oleracea HOM05D000848 ORTHO05D003342 6.0e-31 139.0 260 31.5
C06p21550 Brassica napus HOM05D000848 ORTHO05D022013 7.9e-31 138.7 258 35.3
A08p36780 Brassica napus HOM05D006492 ORTHO05D008432 1.8e-30 137.5 260 31.9
C01p37290 Brassica napus HOM05D000848 ORTHO05D003342 1.8e-30 137.5 89 67.4
BolC9t59892H Brassica oleracea HOM05D000848 ORTHO05D033378 3.9e-30 136.3 253 36.0
BolC3t18957H Brassica oleracea HOM05D000848 ORTHO05D000007 8.7e-30 135.2 89 64.0
C05p03590 Brassica napus HOM05D000848 ORTHO05D023963 1.9e-29 134.0 260 31.2
A02p09070 Brassica napus HOM05D000848 ORTHO05D003342 5.6e-29 132.5 89 62.9
BolC9t57644H Brassica oleracea HOM05D000848 ORTHO05D003342 7.4e-29 132.1 89 65.2
C01p33860 Brassica napus HOM05D000848 ORTHO05D003342 9.6e-29 131.7 88 63.6
C03p85290 Brassica napus HOM05D000848 ORTHO05D003342 1.6e-28 131.0 260 30.4
BolC8t51574H Brassica oleracea HOM05D000848 ORTHO05D003342 1.6e-28 131.0 260 30.4
BolC8t49929H Brassica oleracea HOM05D000848 ORTHO05D003342 3.7e-28 129.8 101 61.4
C01p28500 Brassica napus HOM05D000848 ORTHO05D003342 4.8e-28 129.4 249 33.3
C04p01170 Brassica napus HOM05D000848 ORTHO05D003342 4.8e-28 129.4 248 35.1
C07p42200 Brassica napus HOM05D000848 ORTHO05D003342 4.8e-28 129.4 89 61.8
C01p47370 Brassica napus HOM05D000848 ORTHO05D003342 6.2e-28 129.0 89 59.6
C08p40030 Brassica napus HOM05D000848 ORTHO05D003342 6.2e-28 129.0 89 59.6
BolC3t15415H Brassica oleracea HOM05D000848 ORTHO05D003342 6.2e-28 129.0 89 59.6
CARHR183910 Cardamine hirsuta HOM05D000848 ORTHO05D000007 1.1e-27 128.3 89 66.3
BraA02t08013Z Brassica rapa HOM05D000848 ORTHO05D003342 1.4e-27 127.9 89 61.8
BolC5t29138H Brassica oleracea HOM05D000848 ORTHO05D003342 1.8e-27 127.5 89 58.4
C08p45890 Brassica napus HOM05D000848 ORTHO05D003342 3.1e-27 126.7 89 58.4
C02p59740 Brassica napus HOM05D000848 ORTHO05D003342 4.0e-27 126.3 89 57.3
BraA04t15881Z Brassica rapa HOM05D000848 ORTHO05D003342 1.7e-25 120.9 220 35.5
C05p18240 Brassica napus HOM05D000848 ORTHO05D027490 2.9e-25 120.2 72 72.2
Thhalv10006382m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 6.5e-25 119.0 118 51.7
Thhalv10029505m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 8.4e-25 118.6 93 60.2
AL6G40690 Arabidopsis lyrata HOM05D000848 ORTHO05D003342 1.1e-24 118.2 89 59.6
Thhalv10005348m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 1.4e-24 117.9 93 58.1
Thhalv10019699m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 1.4e-24 117.9 120 50.8
C08p44850 Brassica napus HOM05D000848 ORTHO05D027490 2.5e-24 117.1 72 72.2
BolC8t52031H Brassica oleracea HOM05D000848 ORTHO05D027490 2.5e-24 117.1 72 72.2
C02p51770 Brassica napus HOM05D000848 ORTHO05D003342 3.2e-24 116.7 102 52.9
BolC7t45760H Brassica oleracea HOM05D000848 ORTHO05D000007 7.1e-24 115.5 106 50.0
BcaC06g30921 Brassica carinata HOM05D000848 ORTHO05D018560 1.2e-23 114.8 109 50.5
A03p29750 Brassica napus HOM05D000848 ORTHO05D003342 2.1e-23 114.0 140 46.4
Thhalv10017861m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 3.5e-23 113.2 167 40.7
Thhalv10019607m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 7.9e-23 112.1 113 50.4
C01p15420 Brassica napus HOM05D000848 ORTHO05D003342 1.0e-22 111.7 159 42.8
BraA01t03870Z Brassica rapa HOM05D000848 ORTHO05D003342 1.0e-22 111.7 84 59.5
BolC1t01496H Brassica oleracea HOM05D000848 ORTHO05D003342 1.3e-22 111.3 112 50.9
BolC2t11262H Brassica oleracea HOM05D000848 ORTHO05D003342 2.3e-22 110.5 101 50.5
BolC2t07668H Brassica oleracea HOM05D000848 ORTHO05D003342 3.0e-22 110.2 149 44.3
BcaC01g06423 Brassica carinata HOM05D000848 ORTHO05D020139 5.1e-22 109.4 89 53.9
Thhalv10024110m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 5.1e-22 109.4 190 39.5
AT2G07760 Arabidopsis thaliana HOM05D000848 ORTHO05D003342 6.7e-22 109.0 89 59.6
A04p17460 Brassica napus HOM05D000848 ORTHO05D003342 6.7e-22 109.0 139 46.0
BraA04t17369Z Brassica rapa HOM05D000848 ORTHO05D016609 6.7e-22 109.0 139 46.0
Thhalv10016371m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 6.7e-22 109.0 125 44.8
A09p10540 Brassica napus HOM05D000848 ORTHO05D003342 1.5e-21 107.8 89 52.8
BcaC02g10198 Brassica carinata HOM05D000016 ORTHO05D000109 9.7e-21 105.1 80 58.8
C09p24120 Brassica napus HOM05D000848 ORTHO05D018553 4.8e-20 102.8 102 48.0
Carub.0001s1624 Capsella rubella HOM05D000848 ORTHO05D003342 8.2e-20 102.1 123 46.3
BolC5t29737H Brassica oleracea HOM05D000848 ORTHO05D003342 1.4e-19 101.3 203 32.5
BolC5t29801H Brassica oleracea HOM05D000848 ORTHO05D018552 1.8e-19 100.9 229 31.0
Thhalv10019718m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 4.1e-19 99.8 168 37.5
BolC5t31924H Brassica oleracea HOM05D015390 ORTHO05D018553 5.3e-19 99.4 102 45.1
A02p32130 Brassica napus HOM05D000848 ORTHO05D020100 1.2e-18 98.2 94 51.1
A06p43830 Brassica napus HOM05D000848 ORTHO05D003342 1.2e-18 98.2 94 51.1
C09p22620 Brassica napus HOM05D000848 ORTHO05D003342 2.6e-18 97.1 93 49.5
AT5G28823 Arabidopsis thaliana HOM05D021876 ORTHO05D023643 4.5e-18 96.3 79 51.9
BolC8t49965H Brassica oleracea HOM05D000848 ORTHO05D014511 1.9e-16 90.9 58 60.3
CARHR055550 Cardamine hirsuta HOM05D000848 ORTHO05D003342 1.9e-16 90.9 130 40.0
THA.LOC104822216 Tarenaya hassleriana HOM05D000848 ORTHO05D000007 3.2e-16 90.1 86 43.0
BolC9t55179H Brassica oleracea HOM05D000848 ORTHO05D003342 4.2e-16 89.7 139 40.3
Thhalv10015630m.g Eutrema salsugineum HOM05D000848 ORTHO05D000007 4.2e-16 89.7 100 42.0
Carub.0008s0629 Capsella rubella HOM05D000003 ORTHO05D000004 5.5e-16 89.4 100 41.0
THA.LOC104813290 Tarenaya hassleriana HOM05D000848 ORTHO05D000007 7.2e-16 89.0 86 43.0
THA.LOC104820715 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 1.2e-15 88.2 191 32.5
C04p18710 Brassica napus HOM05D000848 ORTHO05D003342 2.1e-15 87.4 76 60.5
C04p18840 Brassica napus HOM05D000848 ORTHO05D003342 2.1e-15 87.4 76 60.5
C08p11020 Brassica napus HOM05D000848 ORTHO05D003342 2.7e-15 87.0 110 37.3
Carub.0003s3091 Capsella rubella HOM05D000848 ORTHO05D003342 3.6e-15 86.7 98 39.8
Thhalv10019627m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 3.6e-15 86.7 100 39.0
THA.LOC104820681 Tarenaya hassleriana HOM05D000848 ORTHO05D003342 4.6e-15 86.3 86 43.0
BcaC06g35997 Brassica carinata HOM05D000003 ORTHO05D003342 6.1e-15 85.9 93 40.9
BcaC07g38354 Brassica carinata HOM05D000848 ORTHO05D003342 6.1e-15 85.9 91 41.8
AL2G10360 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 7.9e-15 85.5 100 40.0
AL7G34100 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 1.0e-14 85.1 93 43.0
Thhalv10026463m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 1.8e-14 84.3 76 56.6
THA.LOC104825380 Tarenaya hassleriana HOM05D000848 ORTHO05D000007 1.8e-14 84.3 86 40.7
BcaC01g04543 Brassica carinata HOM05D000848 ORTHO05D003342 2.3e-14 84.0 93 40.9
Thhalv10000506m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 2.3e-14 84.0 114 36.0
Thhalv10012241m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 3.0e-14 83.6 104 39.4
THA.LOC104814698 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 3.9e-14 83.2 86 39.5
THA.LOC104820719 Tarenaya hassleriana HOM05D000848 ORTHO05D003342 1.5e-13 81.3 86 38.4
BraA05t20700Z Brassica rapa HOM05D000848 ORTHO05D024289 2.0e-13 80.9 115 46.1
BcaC07g38652 Brassica carinata HOM05D000848 ORTHO05D003342 2.5e-13 80.5 140 33.6
C08p48880 Brassica napus HOM05D000848 ORTHO05D003342 2.5e-13 80.5 69 53.6
AL3G40240 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 3.3e-13 80.1 127 33.1
BolC6t37720H Brassica oleracea HOM05D000848 ORTHO05D003342 3.3e-13 80.1 87 37.9
BcaC03g17734 Brassica carinata HOM05D011482 ORTHO05D032732 4.3e-13 79.7 79 58.2
Carub.0006s0618 Capsella rubella HOM05D000848 ORTHO05D003342 7.4e-13 79.0 93 40.9
BcaB06g27916 Brassica carinata HOM05D000848 ORTHO05D003342 1.3e-12 78.2 93 36.6
BolC8t49062H Brassica oleracea HOM05D000848 ORTHO05D003342 4.8e-12 76.3 113 33.6
C06p39980 Brassica napus HOM05D000848 ORTHO05D015498 8.2e-12 75.5 108 45.4
Thhalv10027423m.g Eutrema salsugineum HOM05D000848 ORTHO05D000007 8.2e-12 75.5 94 37.2
THA.LOC104814739 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 8.2e-12 75.5 217 29.0
Thhalv10009948m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 1.1e-11 75.1 62 56.5
Thhalv10023807m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 1.1e-11 75.1 114 30.7
BraSC37t46109Z Brassica rapa HOM05D000848 ORTHO05D003342 4.1e-11 73.2 83 38.6
THA.LOC104827688 Tarenaya hassleriana HOM05D000848 ORTHO05D000007 6.9e-11 72.4 165 32.1
Carub.0004s1662 Capsella rubella HOM05D000848 ORTHO05D003342 9.1e-11 72.0 75 44.0
Thhalv10023055m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 2.0e-10 70.9 110 30.9
Sp2g07330 Schrenkiella parvula HOM05D000848 ORTHO05D003342 2.6e-10 70.5 53 60.4
BolC7t41378H Brassica oleracea HOM05D000848 ORTHO05D003342 4.5e-10 69.7 109 33.9
AT5G32613 Arabidopsis thaliana HOM05D000848 ORTHO05D003342 7.7e-10 68.9 112 33.9
Carub.0008s0661 Capsella rubella HOM05D000848 ORTHO05D000007 7.7e-10 68.9 102 30.4
THA.LOC104814690 Tarenaya hassleriana HOM05D000848 ORTHO05D000007 7.7e-10 68.9 67 43.3
THA.LOC104808465 Tarenaya hassleriana HOM05D000848 ORTHO05D000007 1.3e-09 68.2 72 40.3
Thhalv10023978m.g Eutrema salsugineum HOM05D000848 ORTHO05D000007 2.2e-09 67.4 143 31.5
Thhalv10026798m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 8.5e-09 65.5 53 62.3
THA.LOC104808473 Tarenaya hassleriana HOM05D000848 ORTHO05D000007 1.1e-08 65.1 67 40.3
Thhalv10001790m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 1.4e-08 64.7 103 32.0
BcaC06g36724 Brassica carinata HOM05D000003 ORTHO05D000006 2.5e-08 63.9 78 41.0
Carub.0005s1704 Capsella rubella HOM05D000848 ORTHO05D000007 3.2e-08 63.5 119 30.3
THA.LOC104810236 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 5.5e-08 62.8 96 33.3
Carub.0007s3131 Capsella rubella HOM05D000848 ORTHO05D003342 1.2e-07 61.6 58 55.2
Thhalv10029298m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 1.6e-07 61.2 86 40.7
THA.LOC104804647 Tarenaya hassleriana HOM05D000848 ORTHO05D000007 2.7e-07 60.5 51 51.0
THA.LOC104815137 Tarenaya hassleriana HOM05D000003 ORTHO05D000007 2.7e-07 60.5 81 34.6
BolC6t39016H Brassica oleracea HOM05D000848 ORTHO05D000007 1.8e-06 57.8 106 27.4
THA.LOC104804985 Tarenaya hassleriana HOM05D000848 ORTHO05D000007 2.3e-06 57.4 87 27.6
THA.LOC109116097 Tarenaya hassleriana HOM05D000003 ORTHO05D000007 2.3e-06 57.4 85 30.6
Carub.0002s1565 Capsella rubella HOM05D000848 ORTHO05D003342 3.0e-06 57.0 46 58.7
BcaC04g21633 Brassica carinata HOM05D000848 ORTHO05D000007 3.9e-06 56.6 102 28.4
BcaC04g23149 Brassica carinata HOM05D000848 ORTHO05D000007 3.9e-06 56.6 102 28.4
A07p37240 Brassica napus HOM05D000848 ORTHO05D003342 3.9e-06 56.6 34 73.5
BraA07t31284Z Brassica rapa HOM05D000848 ORTHO05D003342 3.9e-06 56.6 34 73.5
BolC1t02289H Brassica oleracea HOM05D000848 ORTHO05D003342 6.7e-06 55.8 56 42.9


User provided reference genes

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