Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p03020 Brassica napus HOM05D004342 ORTHO05D042740 8.2e-148 526.9 249 100.0
BolC7t40696H Brassica oleracea HOM05D004342 ORTHO05D042740 1.3e-145 519.6 249 98.4
C04p26830 Brassica napus HOM05D004342 ORTHO05D011040 1.6e-98 363.2 263 68.1
C04p46690 Brassica napus HOM05D004342 ORTHO05D011040 3.5e-98 362.1 263 66.9
BolC6t36906H Brassica oleracea HOM05D004342 ORTHO05D011040 5.9e-98 361.3 271 66.4
BraA02t07939Z Brassica rapa HOM05D004342 ORTHO05D107931 1.3e-97 360.1 274 65.3
BcaC03g15908 Brassica carinata HOM05D004342 ORTHO05D011040 2.8e-95 352.4 263 66.5
BolC4t24121H Brassica oleracea HOM05D004342 ORTHO05D011040 3.6e-95 352.1 274 65.0
BolC4t26257H Brassica oleracea HOM05D004342 ORTHO05D011040 4.4e-93 345.1 274 62.8
C03p64680 Brassica napus HOM05D004342 ORTHO05D040895 3.5e-90 335.5 205 79.0
BcaB05g23725 Brassica carinata HOM05D004342 ORTHO05D011040 6.0e-90 334.7 247 65.2
BcaC05g27753 Brassica carinata HOM05D004342 ORTHO05D032754 1.0e-89 334.0 248 66.1
C09p56360 Brassica napus HOM05D004342 ORTHO05D011040 1.7e-89 333.2 263 64.3
BcaB07g32852 Brassica carinata HOM05D004342 ORTHO05D011040 2.3e-89 332.8 252 64.3
BcaC04g19377 Brassica carinata HOM05D004342 ORTHO05D011040 2.3e-89 332.8 264 64.0
BcaB03g16647 Brassica carinata HOM05D004342 ORTHO05D011040 3.0e-89 332.4 269 62.5
C07p02600 Brassica napus HOM05D004342 ORTHO05D040391 1.5e-88 330.1 261 62.1
BolC7t40658H Brassica oleracea HOM05D004342 ORTHO05D040391 3.3e-88 328.9 261 61.7
BcaB01g01402 Brassica carinata HOM05D004342 ORTHO05D011040 4.3e-88 328.6 264 62.5
BcaB08g35473 Brassica carinata HOM05D004342 ORTHO05D011040 2.1e-87 326.2 266 62.0
BolC9t58505H Brassica oleracea HOM05D004342 ORTHO05D011040 8.1e-87 324.3 266 62.8
BraA04t16111Z Brassica rapa HOM05D004342 ORTHO05D011040 1.1e-86 323.9 270 61.1
BcaB05g23589 Brassica carinata HOM05D004342 ORTHO05D011040 1.3e-84 317.0 266 59.0
C05p37450 Brassica napus HOM05D004342 ORTHO05D032754 1.3e-84 317.0 245 63.7
BolC5t33355H Brassica oleracea HOM05D004342 ORTHO05D016748 2.9e-84 315.8 207 71.0
BcaB08g35285 Brassica carinata HOM05D004342 ORTHO05D011040 3.7e-84 315.5 265 60.0
C03p70160 Brassica napus HOM05D004342 ORTHO05D011040 3.7e-84 315.5 236 64.8
BcaB01g02102 Brassica carinata HOM05D004342 ORTHO05D011040 1.4e-83 313.5 265 60.4
C06p17080 Brassica napus HOM05D004342 ORTHO05D016748 1.6e-82 310.1 207 70.0
BcaB05g23453 Brassica carinata HOM05D004342 ORTHO05D011040 3.5e-82 308.9 262 59.5
C02p48390 Brassica napus HOM05D004342 ORTHO05D011040 4.6e-82 308.5 263 60.5
BolC2t10870H Brassica oleracea HOM05D004342 ORTHO05D011040 4.6e-82 308.5 263 60.5
BolC8t47840H Brassica oleracea HOM05D004342 ORTHO05D016748 3.9e-81 305.4 207 69.6
BcaB06g27477 Brassica carinata HOM05D004342 ORTHO05D011040 8.6e-81 304.3 254 60.6
BcaB06g27914 Brassica carinata HOM05D004342 ORTHO05D011040 1.5e-80 303.5 263 58.9
BolC3t21133H Brassica oleracea HOM05D004342 ORTHO05D016748 4.3e-80 302.0 209 69.4
C05p46270 Brassica napus HOM05D004342 ORTHO05D016748 2.8e-79 299.3 207 68.1
BolC3t18726H Brassica oleracea HOM05D004342 ORTHO05D040895 4.7e-79 298.5 205 71.7
BolC3t19271H Brassica oleracea HOM05D004342 ORTHO05D032754 2.4e-78 296.2 245 59.6
BolC8t49973H Brassica oleracea HOM05D004342 ORTHO05D042841 8.9e-78 294.3 213 70.9
BcaB08g35403 Brassica carinata HOM05D004342 ORTHO05D011040 1.2e-77 293.9 264 57.6
C08p23450 Brassica napus HOM05D004342 ORTHO05D042841 1.3e-76 290.4 261 60.2
BcaB08g35544 Brassica carinata HOM05D004342 ORTHO05D011040 1.2e-74 283.9 265 56.2
BcaB02g10664 Brassica carinata HOM05D004342 ORTHO05D011040 3.5e-74 282.3 263 56.3
C05p32840 Brassica napus HOM05D004342 ORTHO05D041540 4.6e-74 282.0 263 55.9
BolC5t32015H Brassica oleracea HOM05D004342 ORTHO05D041540 4.6e-74 282.0 263 55.9
BcaC03g16189 Brassica carinata HOM05D004342 ORTHO05D011040 2.3e-73 279.6 266 56.4
BraA01t02418Z Brassica rapa HOM05D004342 ORTHO05D011040 1.5e-72 276.9 260 56.2
BolC2t09619H Brassica oleracea HOM05D004342 ORTHO05D033291 1.6e-71 273.5 249 56.2
BcaB02g06560 Brassica carinata HOM05D004342 ORTHO05D011040 4.7e-71 271.9 271 53.9
BcaB03g16622 Brassica carinata HOM05D004342 ORTHO05D011040 8.1e-71 271.2 265 54.3
BcaC08g47011 Brassica carinata HOM05D004342 ORTHO05D011040 8.1e-71 271.2 254 54.7
C02p36040 Brassica napus HOM05D004342 ORTHO05D033291 3.1e-70 269.2 249 55.4
BcaB07g33971 Brassica carinata HOM05D004342 ORTHO05D011040 4.4e-69 265.4 255 55.3
BolC2t09673H Brassica oleracea HOM05D004342 ORTHO05D042860 4.2e-67 258.8 274 53.6
BcaB04g18145 Brassica carinata HOM05D004342 ORTHO05D011040 1.2e-66 257.3 251 54.2
C04p30590 Brassica napus HOM05D004342 ORTHO05D097110 1.0e-65 254.2 258 51.6
C03p68080 Brassica napus HOM05D004342 ORTHO05D042288 3.0e-65 252.7 261 53.3
BolC3t19031H Brassica oleracea HOM05D004342 ORTHO05D042288 3.0e-65 252.7 261 53.3
C02p36010 Brassica napus HOM05D004342 ORTHO05D033291 3.3e-64 249.2 236 54.7
BraA09t39012Z Brassica rapa HOM05D004342 ORTHO05D041860 5.6e-64 248.4 195 63.6
C05p42390 Brassica napus HOM05D004342 ORTHO05D041824 2.4e-62 243.0 140 84.3
BolC5t32968H Brassica oleracea HOM05D004342 ORTHO05D041824 2.4e-62 243.0 140 84.3
A09p34820 Brassica napus HOM05D004342 ORTHO05D041860 6.9e-62 241.5 195 61.5
A02p29080 Brassica napus HOM05D004342 ORTHO05D042860 1.2e-61 240.7 263 51.7
BcaC08g44285 Brassica carinata HOM05D004342 ORTHO05D016748 1.0e-57 227.6 151 70.2
BolC5t32487H Brassica oleracea HOM05D004342 ORTHO05D016748 3.3e-56 222.6 154 67.5
C06p19750 Brassica napus HOM05D003441 ORTHO05D004516 1.3e-55 220.7 194 58.8
BcaC01g01112 Brassica carinata HOM05D004342 ORTHO05D016748 1.4e-54 217.2 154 68.2
BcaB02g07288 Brassica carinata HOM05D004342 ORTHO05D016748 1.5e-53 213.8 152 66.4
A06p23950 Brassica napus HOM05D004342 ORTHO05D013036 3.4e-53 212.6 172 59.3
BcaB05g23199 Brassica carinata HOM05D004342 ORTHO05D011040 4.5e-53 212.2 199 56.3
A06p24190 Brassica napus HOM05D004342 ORTHO05D013036 1.7e-52 210.3 172 58.7
BcaB06g27861 Brassica carinata HOM05D004342 ORTHO05D011040 3.8e-52 209.1 194 56.7
A10p05900 Brassica napus HOM05D004342 ORTHO05D013036 3.8e-52 209.1 169 59.8
A02p33870 Brassica napus HOM05D004342 ORTHO05D013036 6.4e-52 208.4 172 58.7
A05p21050 Brassica napus HOM05D004342 ORTHO05D013036 8.4e-52 208.0 172 58.1
A05p24900 Brassica napus HOM05D004342 ORTHO05D013036 8.4e-52 208.0 172 58.7
BraA04t16568Z Brassica rapa HOM05D004342 ORTHO05D013036 3.2e-51 206.1 173 58.4
A06p14130 Brassica napus HOM05D004342 ORTHO05D013036 9.3e-51 204.5 172 56.4
BcaB01g02523 Brassica carinata HOM05D004342 ORTHO05D016748 1.1e-48 197.6 152 61.8
BcaC01g01958 Brassica carinata HOM05D004342 ORTHO05D090434 2.1e-47 193.4 140 65.0
A04p03900 Brassica napus HOM05D004342 ORTHO05D018601 1.1e-46 191.0 128 67.2
BolC2t09984H Brassica oleracea HOM05D004342 ORTHO05D107287 5.3e-46 188.7 275 41.1
C03p67290 Brassica napus HOM05D004342 ORTHO05D033138 9.0e-46 188.0 193 51.3
BolSC21t60296H Brassica oleracea HOM05D004342 ORTHO05D033138 9.0e-46 188.0 193 51.3
BcaB02g11238 Brassica carinata HOM05D004342 ORTHO05D011040 2.2e-44 183.3 140 60.7
BcaB04g18376 Brassica carinata HOM05D004342 ORTHO05D018601 1.1e-43 181.0 126 65.9
A10p08140 Brassica napus HOM05D004342 ORTHO05D014936 3.2e-43 179.5 149 61.1
C03p88250 Brassica napus HOM05D004342 ORTHO05D018601 7.1e-43 178.3 134 64.2
BraSC35t45984Z Brassica rapa HOM05D004342 ORTHO05D014936 1.6e-42 177.2 149 60.4
C08p05970 Brassica napus HOM05D004342 ORTHO05D098872 2.7e-42 176.4 185 51.9
BcaB06g27355 Brassica carinata HOM05D004342 ORTHO05D011040 2.3e-41 173.3 262 39.7
A03p66330 Brassica napus HOM05D000062 ORTHO05D000043 6.7e-41 171.8 137 59.9
A01p25070 Brassica napus HOM05D004342 ORTHO05D011040 1.5e-40 170.6 262 43.1
C01p35180 Brassica napus HOM05D004342 ORTHO05D028050 4.3e-40 169.1 169 52.7
BolC1t03477H Brassica oleracea HOM05D004342 ORTHO05D028050 4.3e-40 169.1 169 52.7
BraA10t42852Z Brassica rapa HOM05D004342 ORTHO05D013036 4.3e-40 169.1 153 55.6
BcaC06g36550 Brassica carinata HOM05D004342 ORTHO05D018601 1.3e-39 167.5 87 89.7
A01p27340 Brassica napus HOM05D004342 ORTHO05D028050 1.6e-39 167.2 169 51.5
BolC7t41910H Brassica oleracea HOM05D004342 ORTHO05D014936 1.6e-39 167.2 121 67.8
BraA01t02874Z Brassica rapa HOM05D004342 ORTHO05D028050 1.6e-39 167.2 169 51.5
BcaB01g01175 Brassica carinata HOM05D004342 ORTHO05D018601 2.8e-39 166.4 138 57.2
BraA06t25485Z Brassica rapa HOM05D004342 ORTHO05D013036 3.7e-39 166.0 156 53.2
A06p19230 Brassica napus HOM05D004342 ORTHO05D018601 8.2e-39 164.9 93 82.8
C02p39690 Brassica napus HOM05D004342 ORTHO05D014936 8.2e-39 164.9 121 67.8
C07p09210 Brassica napus HOM05D004342 ORTHO05D014936 1.4e-38 164.1 121 66.1
BolC7t41332H Brassica oleracea HOM05D004342 ORTHO05D014936 1.4e-38 164.1 121 66.1
C07p14140 Brassica napus HOM05D004342 ORTHO05D014936 1.8e-38 163.7 121 66.9
BcaB07g33403 Brassica carinata HOM05D004342 ORTHO05D093493 2.4e-38 163.3 144 59.0
BraA02t08405Z Brassica rapa HOM05D004342 ORTHO05D013036 2.4e-38 163.3 156 53.2
C01p33380 Brassica napus HOM05D004342 ORTHO05D101940 3.1e-38 162.9 90 85.6
BraA06t24546Z Brassica rapa HOM05D004342 ORTHO05D013036 4.1e-38 162.5 156 51.3
BraA01t02499Z Brassica rapa HOM05D004342 ORTHO05D013036 5.3e-38 162.2 150 53.3
BraA07t27945Z Brassica rapa HOM05D004342 ORTHO05D014936 5.3e-38 162.2 103 78.6
A07p06040 Brassica napus HOM05D004342 ORTHO05D101341 9.0e-38 161.4 149 55.0
BraA10t43034Z Brassica rapa HOM05D004342 ORTHO05D013036 4.5e-37 159.1 155 53.5
BolC6t36414H Brassica oleracea HOM05D004342 ORTHO05D042454 1.1e-35 154.5 249 39.0
BolC8t47411H Brassica oleracea HOM05D004342 ORTHO05D106550 1.9e-35 153.7 238 41.2
BcaC07g39329 Brassica carinata HOM05D004342 ORTHO05D018601 3.2e-35 152.9 89 79.8
C02p40210 Brassica napus HOM05D004342 ORTHO05D018674 1.2e-34 151.0 91 75.8
C02p40200 Brassica napus HOM05D004342 ORTHO05D014936 3.9e-33 146.0 107 67.3
A01p28260 Brassica napus HOM05D004342 ORTHO05D014936 4.3e-32 142.5 104 69.2
A07p06290 Brassica napus HOM05D004342 ORTHO05D099060 4.3e-32 142.5 119 58.8
C02p26240 Brassica napus HOM05D004342 ORTHO05D040487 4.1e-30 136.0 245 37.6
A03p64730 Brassica napus HOM05D004342 ORTHO05D013036 1.2e-29 134.4 119 56.3
BolC2t08690H Brassica oleracea HOM05D004342 ORTHO05D040487 2.6e-29 133.3 245 36.7
BraA03t15693Z Brassica rapa HOM05D004342 ORTHO05D027051 3.4e-29 132.9 87 67.8
C06p12600 Brassica napus HOM05D004342 ORTHO05D042454 5.5e-27 125.6 249 34.9
BolC7t41081H Brassica oleracea HOM05D004342 ORTHO05D042200 5.5e-27 125.6 134 52.2
BcaB04g17938 Brassica carinata HOM05D004342 ORTHO05D011040 2.1e-26 123.6 102 57.8
BolC2t10046H Brassica oleracea HOM05D004342 ORTHO05D018674 3.6e-26 122.9 106 59.4
C07p06590 Brassica napus HOM05D004342 ORTHO05D042200 6.1e-26 122.1 134 51.5
A06p35820 Brassica napus HOM05D004342 ORTHO05D013036 1.4e-25 120.9 96 60.4
BcaB07g33226 Brassica carinata HOM05D004342 ORTHO05D014936 5.1e-25 119.0 96 65.6
BraSC35t45983Z Brassica rapa HOM05D004342 ORTHO05D018674 3.3e-24 116.3 87 65.5
A03p66340 Brassica napus HOM05D004342 ORTHO05D018674 8.2e-23 111.7 71 70.4
BraA03t15692Z Brassica rapa HOM05D004342 ORTHO05D018674 8.2e-23 111.7 71 70.4
BraA06t25007Z Brassica rapa HOM05D004342 ORTHO05D018601 8.2e-23 111.7 93 61.3
C07p09200 Brassica napus HOM05D004342 ORTHO05D096449 1.8e-22 110.5 82 64.6
BolC6t39191H Brassica oleracea HOM05D004342 ORTHO05D041978 5.9e-21 105.5 105 55.2
C02p39700 Brassica napus HOM05D004342 ORTHO05D099964 1.0e-20 104.8 121 47.1
BraA05t21009Z Brassica rapa HOM05D004342 ORTHO05D013036 1.9e-19 100.5 98 51.0
BraA07t27946Z Brassica rapa HOM05D004342 ORTHO05D108557 7.2e-19 98.6 50 88.0
BcaB06g27423 Brassica carinata HOM05D004342 ORTHO05D027051 1.0e-17 94.7 65 67.7
BraA06t25909Z Brassica rapa HOM05D004342 ORTHO05D013036 1.4e-17 94.4 99 49.5
BraA06t25627Z Brassica rapa HOM05D004342 ORTHO05D107595 8.8e-17 91.7 73 56.2
BcaB08g34712 Brassica carinata HOM05D004342 ORTHO05D011040 1.5e-16 90.9 265 28.7
A10p08150 Brassica napus HOM05D004342 ORTHO05D018674 5.7e-16 89.0 59 69.5
BcaB08g35573 Brassica carinata HOM05D004342 ORTHO05D018674 7.4e-16 88.6 74 58.1
BcaC06g35994 Brassica carinata HOM05D004342 ORTHO05D027051 1.8e-14 84.0 60 65.0
BcaC03g16937 Brassica carinata HOM05D004342 ORTHO05D027051 3.1e-14 83.2 67 59.7
BraA06t26508Z Brassica rapa HOM05D004342 ORTHO05D013036 2.9e-12 76.6 80 50.0
C06p42390 Brassica napus HOM05D004342 ORTHO05D041978 8.5e-12 75.1 79 54.4
BraA07t28391Z Brassica rapa HOM05D004342 ORTHO05D014936 3.2e-11 73.2 83 50.6
BolC5t33456H Brassica oleracea HOM05D004342 ORTHO05D042428 2.3e-09 67.0 107 40.2
BraA06t25628Z Brassica rapa HOM05D004342 ORTHO05D033138 5.2e-09 65.9 129 35.7
BolC3t21022H Brassica oleracea HOM05D004342 ORTHO05D041047 6.7e-09 65.5 56 62.5
BcaB02g10428 Brassica carinata HOM05D004342 ORTHO05D018674 8.8e-09 65.1 50 60.0
AT1G52950 Arabidopsis thaliana HOM05D000353 ORTHO05D000174 1.5e-08 64.3 229 24.9
A07p01470 Brassica napus HOM05D004342 ORTHO05D042428 3.3e-08 63.2 37 81.1
BraA03t15562Z Brassica rapa HOM05D004342 ORTHO05D014936 1.7e-07 60.8 67 53.7


User provided reference genes

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