Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p01490 Brassica napus HOM05D010928 ORTHO05D016821 4.4e-228 794.3 399 100.0
BolC3t12674H Brassica oleracea HOM05D010928 ORTHO05D016821 5.8e-212 740.7 399 94.7
C01p00010 Brassica napus HOM05D010928 ORTHO05D016821 3.2e-210 734.9 399 94.0
BolC5t28988H Brassica oleracea HOM05D010928 ORTHO05D016821 3.3e-207 724.9 399 93.5
BolC7t45517H Brassica oleracea HOM05D010928 ORTHO05D016821 1.2e-206 723.0 402 92.8
BraA01t00344Z Brassica rapa HOM05D010928 ORTHO05D016821 1.8e-205 719.2 399 92.7
BraA01t00731Z Brassica rapa HOM05D010928 ORTHO05D016821 2.6e-188 662.1 393 87.3
C05p02110 Brassica napus HOM05D010928 ORTHO05D002464 2.8e-174 615.5 335 93.4
BolC3t16312H Brassica oleracea HOM05D010928 ORTHO05D016821 2.3e-160 569.3 331 89.1
BcaC03g17878 Brassica carinata HOM05D010928 ORTHO05D016821 1.4e-128 463.8 369 71.0
BcaC08g44168 Brassica carinata HOM05D010928 ORTHO05D093445 4.0e-128 462.2 370 67.8
BcaB03g11771 Brassica carinata HOM05D010928 ORTHO05D091924 1.7e-123 446.8 369 66.1
BcaB03g14123 Brassica carinata HOM05D010928 ORTHO05D090945 2.3e-123 446.4 390 62.6
BcaC07g42699 Brassica carinata HOM05D010928 ORTHO05D090478 2.2e-118 429.9 387 61.5
C07p57580 Brassica napus HOM05D010928 ORTHO05D016821 2.1e-92 343.6 169 99.4
BcaNung03034 Brassica carinata HOM05D010928 ORTHO05D094015 1.7e-86 323.9 390 52.3
C02p59180 Brassica napus HOM05D010928 ORTHO05D103551 1.1e-56 224.9 133 89.5
C02p59170 Brassica napus HOM05D010928 ORTHO05D098476 3.6e-36 156.8 93 89.2
C08p03380 Brassica napus HOM05D008956 ORTHO05D016720 8.2e-25 119.0 364 34.3
C06p08310 Brassica napus HOM05D008956 ORTHO05D016720 2.2e-22 110.9 365 33.7
BraA04t17515Z Brassica rapa HOM05D012445 ORTHO05D018631 1.9e-21 107.8 223 38.1
C03p03630 Brassica napus HOM05D008956 ORTHO05D013254 9.4e-21 105.5 371 31.8
BraA03t14966Z Brassica rapa HOM05D008956 ORTHO05D016720 1.2e-20 105.1 368 34.5
BcaC08g43240 Brassica carinata HOM05D013416 ORTHO05D024230 1.6e-20 104.8 347 33.1
BolC4t27983H Brassica oleracea HOM05D008956 ORTHO05D013254 1.6e-20 104.8 372 32.5
BraA02t06360Z Brassica rapa HOM05D008956 ORTHO05D013254 2.1e-20 104.4 216 39.4
BcaC06g32745 Brassica carinata HOM05D009754 ORTHO05D020043 2.7e-20 104.0 396 33.8
BraA09t36164Z Brassica rapa HOM05D012445 ORTHO05D018631 2.7e-20 104.0 223 38.1
C02p29070 Brassica napus HOM05D009754 ORTHO05D020043 4.7e-20 103.2 336 34.8
BolC3t12902H Brassica oleracea HOM05D008956 ORTHO05D013254 4.7e-20 103.2 371 31.8
C07p48040 Brassica napus HOM05D011346 ORTHO05D015475 8.0e-20 102.4 202 43.1
BraA03t13996Z Brassica rapa HOM05D012445 ORTHO05D018631 1.0e-19 102.1 223 37.7
BcaC06g32208 Brassica carinata HOM05D003240 ORTHO05D021783 1.8e-19 101.3 245 37.6
BraA08t34184Z Brassica rapa HOM05D009754 ORTHO05D020043 4.0e-19 100.1 397 33.2
C03p51870 Brassica napus HOM05D012445 ORTHO05D018631 6.8e-19 99.4 225 37.3
C03p75630 Brassica napus HOM05D008956 ORTHO05D013254 1.2e-18 98.6 216 38.9
A08p22750 Brassica napus HOM05D010232 ORTHO05D016018 2.6e-18 97.4 203 36.9
BraA08t34244Z Brassica rapa HOM05D010232 ORTHO05D016018 2.6e-18 97.4 203 36.9
BraA10t43860Z Brassica rapa HOM05D009754 ORTHO05D020043 2.6e-18 97.4 394 32.5
BcaC09g47943 Brassica carinata HOM05D003240 ORTHO05D021783 3.4e-18 97.1 263 35.7
A09p39950 Brassica napus HOM05D003240 ORTHO05D021783 7.5e-18 95.9 246 36.6
BolC1t00828H Brassica oleracea HOM05D010232 ORTHO05D016018 1.7e-17 94.7 202 35.6
BcaC06g33773 Brassica carinata HOM05D013416 ORTHO05D024230 6.3e-17 92.8 320 31.2
BcaC09g51848 Brassica carinata HOM05D010232 ORTHO05D016018 8.3e-17 92.4 191 36.6
A08p21510 Brassica napus HOM05D003240 ORTHO05D016738 1.1e-16 92.0 80 61.2
BraA08t34100Z Brassica rapa HOM05D003240 ORTHO05D016738 1.1e-16 92.0 80 61.2
C07p36910 Brassica napus HOM05D008956 ORTHO05D013254 1.4e-16 91.7 357 31.1
BolC7t44203H Brassica oleracea HOM05D008956 ORTHO05D013254 1.4e-16 91.7 357 31.1
BcaC06g31611 Brassica carinata HOM05D003240 ORTHO05D091789 1.8e-16 91.3 137 46.0
C01p00460 Brassica napus HOM05D003240 ORTHO05D016738 5.4e-16 89.7 243 35.0
C01p08460 Brassica napus HOM05D010232 ORTHO05D016018 5.4e-16 89.7 203 36.9
C01p08510 Brassica napus HOM05D010232 ORTHO05D016018 5.4e-16 89.7 202 35.6
C06p44710 Brassica napus HOM05D003240 ORTHO05D017503 5.4e-16 89.7 220 34.5
BcaC05g26272 Brassica carinata HOM05D003240 ORTHO05D032928 9.1e-16 89.0 264 34.5
C08p48940 Brassica napus HOM05D010928 ORTHO05D101911 9.1e-16 89.0 114 51.8
C03p42360 Brassica napus HOM05D008956 ORTHO05D013254 1.6e-15 88.2 206 38.3
BolC6t36746H Brassica oleracea HOM05D012445 ORTHO05D040835 1.6e-15 88.2 157 43.9
BcaB01g01362 Brassica carinata HOM05D009754 ORTHO05D020043 2.0e-15 87.8 407 31.2
C09p34960 Brassica napus HOM05D010232 ORTHO05D016018 2.0e-15 87.8 203 35.5
BcaB02g08739 Brassica carinata HOM05D010232 ORTHO05D023893 2.7e-15 87.4 300 32.0
BcaC08g43497 Brassica carinata HOM05D003240 ORTHO05D017503 4.5e-15 86.7 201 33.3
BolC9t53578H Brassica oleracea HOM05D011346 ORTHO05D043120 4.5e-15 86.7 207 38.2
BcaC08g47278 Brassica carinata HOM05D003240 ORTHO05D017535 5.9e-15 86.3 184 37.0
BNapus_Darmor_BZH_scaffold_109p00210 Brassica napus HOM05D011346 ORTHO05D015475 5.9e-15 86.3 202 36.1
C06p44540 Brassica napus HOM05D009754 ORTHO05D027209 7.7e-15 85.9 409 30.8
BolC1t01225H Brassica oleracea HOM05D011346 ORTHO05D015475 7.7e-15 85.9 203 37.4
A10p20120 Brassica napus HOM05D003240 ORTHO05D032928 1.0e-14 85.5 212 37.3
C06p51070 Brassica napus HOM05D011346 ORTHO05D015475 1.0e-14 85.5 202 36.6
C09p16440 Brassica napus HOM05D012445 ORTHO05D040835 1.3e-14 85.1 157 43.3
BcaC06g35455 Brassica carinata HOM05D012417 ORTHO05D024193 1.7e-14 84.7 119 48.7
BolC1t00874H Brassica oleracea HOM05D003240 ORTHO05D023867 1.7e-14 84.7 135 45.9
BolC6t40058H Brassica oleracea HOM05D003240 ORTHO05D017535 2.2e-14 84.3 194 35.1
C06p50180 Brassica napus HOM05D003240 ORTHO05D017535 2.9e-14 84.0 194 35.1
C09p63070 Brassica napus HOM05D003240 ORTHO05D023867 5.0e-14 83.2 173 37.0
BraA04t18895Z Brassica rapa HOM05D010893 ORTHO05D039094 5.0e-14 83.2 177 39.0
BcaC07g38101 Brassica carinata HOM05D009754 ORTHO05D027209 6.5e-14 82.8 399 30.6
C08p00720 Brassica napus HOM05D003240 ORTHO05D016738 6.5e-14 82.8 80 57.5
BraA09t39506Z Brassica rapa HOM05D011346 ORTHO05D043120 6.5e-14 82.8 207 36.7
BraA01t01392Z Brassica rapa HOM05D011346 ORTHO05D015475 8.5e-14 82.4 202 37.6
BcaC07g39783 Brassica carinata HOM05D003240 ORTHO05D023867 1.1e-13 82.0 147 40.8
C04p03050 Brassica napus HOM05D011346 ORTHO05D015475 1.1e-13 82.0 207 35.3
BolC4t21947H Brassica oleracea HOM05D011346 ORTHO05D015475 1.1e-13 82.0 207 35.3
BcaC06g33134 Brassica carinata HOM05D003240 ORTHO05D094083 1.5e-13 81.6 65 64.6
C07p35510 Brassica napus HOM05D008956 ORTHO05D016720 1.5e-13 81.6 331 32.0
BolC7t44074H Brassica oleracea HOM05D008956 ORTHO05D016720 1.5e-13 81.6 331 32.0
BcaC04g18681 Brassica carinata HOM05D009754 ORTHO05D027209 1.9e-13 81.3 395 31.9
C07p46390 Brassica napus HOM05D003240 ORTHO05D016738 1.9e-13 81.3 80 56.2
BolC4t25249H Brassica oleracea HOM05D003240 ORTHO05D104461 1.9e-13 81.3 82 56.1
BolC7t45157H Brassica oleracea HOM05D003240 ORTHO05D016738 1.9e-13 81.3 80 56.2
BcaC03g13399 Brassica carinata HOM05D012417 ORTHO05D024193 3.2e-13 80.5 119 47.1
C09p65770 Brassica napus HOM05D008956 ORTHO05D013254 3.2e-13 80.5 206 37.9
BcaC04g24027 Brassica carinata HOM05D012417 ORTHO05D024193 4.2e-13 80.1 119 47.9
C08p07080 Brassica napus HOM05D010893 ORTHO05D016035 5.5e-13 79.7 381 29.7
C03p21650 Brassica napus HOM05D012417 ORTHO05D024193 7.2e-13 79.3 119 47.1
BolC3t14549H Brassica oleracea HOM05D012417 ORTHO05D024193 7.2e-13 79.3 119 47.1
BolC3t17954H Brassica oleracea HOM05D003240 ORTHO05D016738 7.2e-13 79.3 239 33.9
BcaC02g12116 Brassica carinata HOM05D003240 ORTHO05D039579 9.5e-13 79.0 208 34.6
C04p07300 Brassica napus HOM05D011346 ORTHO05D015475 9.5e-13 79.0 203 36.0
BolC8t49585H Brassica oleracea HOM05D003240 ORTHO05D024027 9.5e-13 79.0 176 39.8
BraA03t10651Z Brassica rapa HOM05D003240 ORTHO05D032928 9.5e-13 79.0 134 47.0
BolC8t51497H Brassica oleracea HOM05D003240 ORTHO05D016738 1.2e-12 78.6 80 55.0
C09p01740 Brassica napus HOM05D003240 ORTHO05D021783 1.6e-12 78.2 123 46.3
BcaB08g36836 Brassica carinata HOM05D008956 ORTHO05D090626 2.1e-12 77.8 323 30.0
A08p33410 Brassica napus HOM05D003240 ORTHO05D017535 2.1e-12 77.8 86 57.0
BraA03t12219Z Brassica rapa HOM05D003240 ORTHO05D017535 2.1e-12 77.8 86 57.0
A09p11060 Brassica napus HOM05D003240 ORTHO05D019881 2.7e-12 77.4 71 60.6
BcaB01g05158 Brassica carinata HOM05D010893 ORTHO05D016035 3.6e-12 77.0 154 44.8
BcaB04g21282 Brassica carinata HOM05D010232 ORTHO05D016018 3.6e-12 77.0 188 34.6
BcaC01g01758 Brassica carinata HOM05D003240 ORTHO05D032152 3.6e-12 77.0 188 36.2
BcaNung00147 Brassica carinata HOM05D003240 ORTHO05D019881 3.6e-12 77.0 104 47.1
BcaC02g07870 Brassica carinata HOM05D010893 ORTHO05D016035 8.0e-12 75.9 394 28.7
C04p69810 Brassica napus HOM05D011346 ORTHO05D099510 1.0e-11 75.5 173 37.0
C07p09020 Brassica napus HOM05D013416 ORTHO05D024230 1.0e-11 75.5 259 30.1
BolC4t22353H Brassica oleracea HOM05D011346 ORTHO05D106028 1.0e-11 75.5 170 38.8
BolC6t39565H Brassica oleracea HOM05D008956 ORTHO05D013254 1.0e-11 75.5 338 30.2
BolC7t41313H Brassica oleracea HOM05D013416 ORTHO05D024230 1.0e-11 75.5 259 30.1
C03p56700 Brassica napus HOM05D003240 ORTHO05D016738 1.4e-11 75.1 76 56.6
C06p45070 Brassica napus HOM05D008956 ORTHO05D013254 1.4e-11 75.1 413 29.3
BraA08t34218Z Brassica rapa HOM05D010893 ORTHO05D016035 1.4e-11 75.1 187 39.0
BcaB02g07535 Brassica carinata HOM05D019895 ORTHO05D019895 2.3e-11 74.3 129 43.4
BcaC05g27248 Brassica carinata HOM05D010232 ORTHO05D023893 3.0e-11 73.9 236 32.2
BcaC07g39633 Brassica carinata HOM05D017424 ORTHO05D039094 3.0e-11 73.9 161 36.0
BolC1t05880H Brassica oleracea HOM05D003240 ORTHO05D024027 3.0e-11 73.9 175 38.3
C07p30560 Brassica napus HOM05D003240 ORTHO05D039579 4.0e-11 73.6 204 35.3
C06p39900 Brassica napus HOM05D008956 ORTHO05D101413 6.8e-11 72.8 112 44.6
C06p40860 Brassica napus HOM05D012445 ORTHO05D041381 8.8e-11 72.4 211 35.5
BolC3t17473H Brassica oleracea HOM05D012445 ORTHO05D018631 8.8e-11 72.4 190 33.7
BolC6t39347H Brassica oleracea HOM05D012445 ORTHO05D041381 8.8e-11 72.4 211 35.5
BolC2t08519H Brassica oleracea HOM05D009754 ORTHO05D105200 1.5e-10 71.6 60 70.0
BcaC07g39648 Brassica carinata HOM05D003240 ORTHO05D095172 2.0e-10 71.2 121 40.5
A05p34580 Brassica napus HOM05D013416 ORTHO05D024230 2.0e-10 71.2 232 29.7
BcaB01g03865 Brassica carinata HOM05D003240 ORTHO05D094508 2.6e-10 70.9 69 58.0
BraA02t08299Z Brassica rapa HOM05D002233 ORTHO05D002299 3.4e-10 70.5 159 44.0
C03p09920 Brassica napus HOM05D010893 ORTHO05D016035 5.7e-10 69.7 60 63.3
C05p58750 Brassica napus HOM05D003240 ORTHO05D019881 5.7e-10 69.7 72 56.9
BraA03t12127Z Brassica rapa HOM05D003240 ORTHO05D019967 7.5e-10 69.3 198 33.8
BcaC08g43321 Brassica carinata HOM05D010232 ORTHO05D023893 1.3e-09 68.6 210 35.2
C04p67930 Brassica napus HOM05D008956 ORTHO05D098482 1.3e-09 68.6 71 54.9
BolC8t47552H Brassica oleracea HOM05D010893 ORTHO05D016035 2.2e-09 67.8 378 27.5
BcaB05g23955 Brassica carinata HOM05D019895 ORTHO05D019895 2.8e-09 67.4 118 44.1
BcaC08g46504 Brassica carinata HOM05D009754 ORTHO05D027209 2.8e-09 67.4 390 29.7
C05p62330 Brassica napus HOM05D003240 ORTHO05D019895 4.9e-09 66.6 130 43.1
BolC5t34528H Brassica oleracea HOM05D003240 ORTHO05D019881 6.3e-09 66.2 72 54.2
BolC5t31661H Brassica oleracea HOM05D010893 ORTHO05D032720 1.4e-08 65.1 61 62.3
BcaC03g18230 Brassica carinata HOM05D003240 ORTHO05D024027 1.8e-08 64.7 194 37.1
C07p62190 Brassica napus HOM05D003240 ORTHO05D019881 1.8e-08 64.7 71 54.9
BcaC02g08188 Brassica carinata HOM05D003240 ORTHO05D017535 2.4e-08 64.3 68 55.9
C04p57490 Brassica napus HOM05D003240 ORTHO05D017535 2.4e-08 64.3 68 55.9
C01p15510 Brassica napus HOM05D003240 ORTHO05D103301 3.1e-08 63.9 143 40.6
BcaB02g07983 Brassica carinata HOM05D003240 ORTHO05D017503 4.1e-08 63.5 373 25.5
BcaNung03688 Brassica carinata HOM05D003240 ORTHO05D019881 4.1e-08 63.5 71 52.1
C03p92080 Brassica napus HOM05D003240 ORTHO05D024027 4.1e-08 63.5 198 35.4
BraA02t06117Z Brassica rapa HOM05D003240 ORTHO05D019881 1.2e-07 62.0 71 53.5
BcaC07g36928 Brassica carinata HOM05D003240 ORTHO05D024027 1.6e-07 61.6 186 37.1
BcaC08g47238 Brassica carinata HOM05D010893 ORTHO05D032352 2.0e-07 61.2 70 55.7
C01p20310 Brassica napus HOM05D002197 ORTHO05D002462 2.0e-07 61.2 53 66.0
BolC5t29061H Brassica oleracea HOM05D010893 ORTHO05D032720 2.0e-07 61.2 61 60.7
BcaB02g10404 Brassica carinata HOM05D037291 ORTHO05D092073 2.7e-07 60.8 137 37.2
C06p08520 Brassica napus HOM05D011346 ORTHO05D015475 3.5e-07 60.5 207 31.4
BcaC02g11293 Brassica carinata HOM05D008956 ORTHO05D013254 4.5e-07 60.1 341 28.2
BolC8t47136H Brassica oleracea HOM05D008956 ORTHO05D016720 1.0e-06 58.9 202 31.7
BcaNung03344 Brassica carinata HOM05D003240 ORTHO05D017535 2.9e-06 57.4 172 35.5
A07p12250 Brassica napus HOM05D003240 ORTHO05D102247 2.9e-06 57.4 44 65.9
BcaB07g31032 Brassica carinata HOM05D003240 ORTHO05D019895 3.8e-06 57.0 122 41.0
C03p42330 Brassica napus HOM05D003240 ORTHO05D019967 3.8e-06 57.0 157 30.6
BolC9t59399H Brassica oleracea HOM05D008956 ORTHO05D105535 3.8e-06 57.0 107 43.0
C04p17940 Brassica napus HOM05D008956 ORTHO05D013254 5.0e-06 56.6 288 28.5
BolC4t23341H Brassica oleracea HOM05D008956 ORTHO05D013254 5.0e-06 56.6 288 28.5
C02p62990 Brassica napus HOM05D003240 ORTHO05D042544 8.6e-06 55.8 157 37.6
BolC2t12373H Brassica oleracea HOM05D003240 ORTHO05D042544 8.6e-06 55.8 157 37.6


User provided reference genes

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