Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p01370 Brassica napus HOM05D004895 ORTHO05D003385 2.9e-85 318.5 162 100.0
BcaC03g15815 Brassica carinata HOM05D004895 ORTHO05D003385 1.4e-84 316.2 162 99.4
A02p22200 Brassica napus HOM05D004895 ORTHO05D003385 7.9e-75 283.9 162 91.4
BraA02t07225Z Brassica rapa HOM05D004895 ORTHO05D003385 7.9e-75 283.9 162 91.4
BolC2t09576H Brassica oleracea HOM05D004895 ORTHO05D003385 6.7e-58 227.6 162 77.8
BcaB05g25141 Brassica carinata HOM05D004895 ORTHO05D003385 1.1e-57 226.9 163 76.7
Sp5g33570 Schrenkiella parvula HOM05D004895 ORTHO05D003385 2.7e-51 205.7 143 75.5
BcaC08g47420 Brassica carinata HOM05D004895 ORTHO05D003385 5.9e-46 188.0 148 67.6
C06p52410 Brassica napus HOM05D004895 ORTHO05D003385 5.9e-46 188.0 148 67.6
BolC6t40260H Brassica oleracea HOM05D004895 ORTHO05D003385 5.9e-46 188.0 148 67.6
BraA07t31885Z Brassica rapa HOM05D004895 ORTHO05D003385 3.8e-45 185.3 148 66.2
A07p43760 Brassica napus HOM05D004895 ORTHO05D003385 5.0e-45 184.9 148 66.2
BcaB03g16021 Brassica carinata HOM05D004895 ORTHO05D003385 1.4e-44 183.3 148 65.5
BcaB03g16024 Brassica carinata HOM05D004895 ORTHO05D003385 3.3e-41 172.2 146 64.4
AL7G40680 Arabidopsis lyrata HOM05D004895 ORTHO05D003385 2.0e-38 162.9 143 59.4
AL7G40710 Arabidopsis lyrata HOM05D004895 ORTHO05D003385 2.0e-38 162.9 143 59.4
Carub.0007s2703 Capsella rubella HOM05D004895 ORTHO05D003385 3.4e-38 162.2 143 58.0
Sp7g13290 Schrenkiella parvula HOM05D004895 ORTHO05D003385 2.1e-35 152.9 149 55.7
Thhalv10002356m.g Eutrema salsugineum HOM05D004895 ORTHO05D003385 1.1e-31 140.6 132 56.8
Thhalv10022453m.g Eutrema salsugineum HOM05D004895 ORTHO05D003385 1.1e-31 140.6 144 53.5
Thhalv10027314m.g Eutrema salsugineum HOM05D004895 ORTHO05D003385 1.1e-31 140.6 132 56.8
Thhalv10027373m.g Eutrema salsugineum HOM05D004895 ORTHO05D003385 3.1e-31 139.0 141 53.9
Thhalv10027541m.g Eutrema salsugineum HOM05D004895 ORTHO05D003385 3.1e-31 139.0 144 52.8
Thhalv10022454m.g Eutrema salsugineum HOM05D004895 ORTHO05D003385 4.1e-31 138.7 129 58.9
Thhalv10002355m.g Eutrema salsugineum HOM05D004895 ORTHO05D003385 6.5e-29 131.3 129 57.4
Thhalv10027448m.g Eutrema salsugineum HOM05D004895 ORTHO05D003385 6.5e-29 131.3 129 57.4
Thhalv10027212m.g Eutrema salsugineum HOM05D004895 ORTHO05D003385 2.5e-28 129.4 129 56.6
Thhalv10026901m.g Eutrema salsugineum HOM05D004895 ORTHO05D003385 9.4e-28 127.5 129 55.8
AL2G38840 Arabidopsis lyrata HOM05D004895 ORTHO05D003385 2.1e-27 126.3 145 49.0
AL2G33910 Arabidopsis lyrata HOM05D004895 ORTHO05D003385 4.0e-26 122.1 127 53.5
AL2G25930 Arabidopsis lyrata HOM05D004895 ORTHO05D003385 6.7e-26 121.3 151 45.7
AT1G78470 Arabidopsis thaliana HOM05D004895 ORTHO05D003385 1.1e-25 120.6 137 48.2
Thhalv10019621m.g Eutrema salsugineum HOM05D004895 ORTHO05D003385 7.5e-25 117.9 129 54.3
CARHR073430 Cardamine hirsuta HOM05D004895 ORTHO05D003385 2.2e-24 116.3 127 54.3
AT1G67390 Arabidopsis thaliana HOM05D004895 ORTHO05D003385 3.7e-24 115.5 153 43.8
BcaB02g06905 Brassica carinata HOM05D004895 ORTHO05D003385 3.7e-24 115.5 151 46.4
AL5G43100 Arabidopsis lyrata HOM05D004895 ORTHO05D003385 1.1e-23 114.0 152 48.0
A10p03240 Brassica napus HOM05D004895 ORTHO05D003385 1.8e-23 113.2 144 47.2
AT3G60790 Arabidopsis thaliana HOM05D004895 ORTHO05D003385 2.4e-23 112.8 144 47.9
BraA10t42600Z Brassica rapa HOM05D004895 ORTHO05D003385 2.4e-23 112.8 144 47.2
A04p01420 Brassica napus HOM05D004895 ORTHO05D003385 3.1e-23 112.5 155 45.8
AT1G80960 Arabidopsis thaliana HOM05D004895 ORTHO05D003385 4.1e-23 112.1 128 50.8
BraA04t15861Z Brassica rapa HOM05D004895 ORTHO05D003385 4.1e-23 112.1 155 45.8
Carub.0001s3755 Capsella rubella HOM05D004895 ORTHO05D003385 5.3e-23 111.7 151 44.4
BcaC02g10185 Brassica carinata HOM05D004895 ORTHO05D003385 7.0e-23 111.3 141 48.2
C04p31810 Brassica napus HOM05D004895 ORTHO05D003385 7.0e-23 111.3 141 48.2
BolC4t24729H Brassica oleracea HOM05D004895 ORTHO05D003385 7.0e-23 111.3 141 48.2
BcaB02g07241 Brassica carinata HOM05D004895 ORTHO05D003385 9.1e-23 110.9 127 51.2
BolC9t57864H Brassica oleracea HOM05D004895 ORTHO05D003385 2.0e-22 109.8 128 51.6
Carub.0002s1368 Capsella rubella HOM05D004895 ORTHO05D003385 2.7e-22 109.4 151 46.4
A04p01440 Brassica napus HOM05D004895 ORTHO05D003385 4.5e-22 108.6 155 43.9
BraA04t15862Z Brassica rapa HOM05D004895 ORTHO05D003385 4.5e-22 108.6 155 43.9
BcaC07g42640 Brassica carinata HOM05D004895 ORTHO05D003385 5.9e-22 108.2 154 47.4
BcaB02g06904 Brassica carinata HOM05D004895 ORTHO05D003385 1.3e-21 107.1 131 49.6
A05p31100 Brassica napus HOM05D004895 ORTHO05D003385 1.3e-21 107.1 125 51.2
C09p50110 Brassica napus HOM05D004895 ORTHO05D003385 1.3e-21 107.1 128 50.8
BraA05t21951Z Brassica rapa HOM05D004895 ORTHO05D003385 1.3e-21 107.1 125 51.2
C04p31900 Brassica napus HOM05D004895 ORTHO05D003385 1.7e-21 106.7 155 44.5
BcaC02g10179 Brassica carinata HOM05D004895 ORTHO05D003385 2.2e-21 106.3 154 43.5
AL2G25940 Arabidopsis lyrata HOM05D004895 ORTHO05D003385 2.9e-21 105.9 131 49.6
A09p52940 Brassica napus HOM05D004895 ORTHO05D003385 5.0e-21 105.1 153 45.8
C08p35730 Brassica napus HOM05D004895 ORTHO05D003385 5.0e-21 105.1 153 44.4
BcaC01g06685 Brassica carinata HOM05D004895 ORTHO05D003385 8.5e-21 104.4 138 46.4
BraA09t40727Z Brassica rapa HOM05D004895 ORTHO05D003385 1.5e-20 103.6 153 45.8
AL2G40610 Arabidopsis lyrata HOM05D004895 ORTHO05D003385 2.5e-20 102.8 142 47.2
A09p52970 Brassica napus HOM05D004895 ORTHO05D003385 2.5e-20 102.8 153 45.1
BolC3t15995H Brassica oleracea HOM05D004895 ORTHO05D003385 2.5e-20 102.8 138 44.2
Sp5g02460 Schrenkiella parvula HOM05D004895 ORTHO05D003385 3.2e-20 102.4 152 45.4
Sp2g01400 Schrenkiella parvula HOM05D004895 ORTHO05D003385 9.4e-20 100.9 137 44.5
BolC8t51164H Brassica oleracea HOM05D004895 ORTHO05D003385 1.2e-19 100.5 153 43.8
C03p36840 Brassica napus HOM05D004895 ORTHO05D003385 3.6e-19 99.0 138 42.8
CARHR073530 Cardamine hirsuta HOM05D004895 ORTHO05D003385 4.7e-19 98.6 125 49.6
Carub.0002s1372 Capsella rubella HOM05D004895 ORTHO05D003385 6.1e-19 98.2 128 47.7
Carub.0002s1371 Capsella rubella HOM05D004895 ORTHO05D003385 1.8e-18 96.7 155 43.2
CARHR171180 Cardamine hirsuta HOM05D004895 ORTHO05D003385 2.3e-18 96.3 151 42.4
BolC6t38131H Brassica oleracea HOM05D004895 ORTHO05D003385 6.8e-18 94.7 103 52.4
Carub.0003s3337 Capsella rubella HOM05D004895 ORTHO05D003385 6.8e-18 94.7 128 49.2
Sp4g04880 Schrenkiella parvula HOM05D004895 ORTHO05D003385 6.8e-18 94.7 137 45.3
BcaC07g40600 Brassica carinata HOM05D004895 ORTHO05D003385 7.5e-17 91.3 142 43.7
BolC8t51165H Brassica oleracea HOM05D004895 ORTHO05D003385 7.5e-17 91.3 142 43.7
C08p35740 Brassica napus HOM05D004895 ORTHO05D003385 9.8e-17 90.9 142 43.7
Carub.0005s2754 Capsella rubella HOM05D004895 ORTHO05D003385 1.3e-16 90.5 132 47.7
Carub.0006s3727 Capsella rubella HOM05D004895 ORTHO05D003385 1.3e-16 90.5 135 45.9
Carub.0002s1369 Capsella rubella HOM05D004895 ORTHO05D003385 1.7e-16 90.1 135 45.2
A09p52990 Brassica napus HOM05D004895 ORTHO05D003385 1.4e-15 87.0 151 41.7
A09p53020 Brassica napus HOM05D004895 ORTHO05D003385 1.4e-15 87.0 151 41.7
BraA09t40728Z Brassica rapa HOM05D004895 ORTHO05D003385 3.1e-15 85.9 151 41.1
A09p52950 Brassica napus HOM05D004895 ORTHO05D003385 7.0e-15 84.7 151 40.4
BcaC05g24680 Brassica carinata HOM05D004895 ORTHO05D003385 1.6e-14 83.6 145 39.3
C05p05220 Brassica napus HOM05D004895 ORTHO05D003385 1.6e-14 83.6 145 39.3
BolC5t29293H Brassica oleracea HOM05D004895 ORTHO05D003385 2.0e-14 83.2 145 38.6
A10p05670 Brassica napus HOM05D004895 ORTHO05D003385 3.5e-14 82.4 145 39.3
BraA10t42828Z Brassica rapa HOM05D004895 ORTHO05D003385 3.5e-14 82.4 145 39.3
BcaC07g40599 Brassica carinata HOM05D004895 ORTHO05D003385 4.5e-14 82.0 143 39.2
A10p03250 Brassica napus HOM05D004895 ORTHO05D003385 4.5e-14 82.0 93 51.6
Thhalv10026887m.g Eutrema salsugineum HOM05D004895 ORTHO05D003385 4.5e-14 82.0 104 47.1
BcaB01g01157 Brassica carinata HOM05D004895 ORTHO05D003385 5.9e-14 81.6 144 38.9
A10p05690 Brassica napus HOM05D004895 ORTHO05D003385 1.0e-13 80.9 145 37.2
BraA10t42831Z Brassica rapa HOM05D004895 ORTHO05D003385 1.0e-13 80.9 145 37.2
Thhalv10026859m.g Eutrema salsugineum HOM05D004895 ORTHO05D003385 1.7e-13 80.1 114 44.7
A09p53010 Brassica napus HOM05D004895 ORTHO05D003385 2.2e-13 79.7 143 42.0
A09p53040 Brassica napus HOM05D004895 ORTHO05D003385 2.2e-13 79.7 143 42.0
BcaB07g33227 Brassica carinata HOM05D004895 ORTHO05D003385 3.8e-13 79.0 144 40.3
C08p35710 Brassica napus HOM05D004895 ORTHO05D003385 8.5e-13 77.8 143 39.9
BolC8t51162H Brassica oleracea HOM05D004895 ORTHO05D003385 1.5e-12 77.0 143 39.9
BraA09t40726Z Brassica rapa HOM05D004895 ORTHO05D003385 1.5e-12 77.0 144 41.7
BolC4t24744H Brassica oleracea HOM05D004895 ORTHO05D003385 2.5e-12 76.3 101 42.6
BraA10t42601Z Brassica rapa HOM05D004895 ORTHO05D003385 2.5e-12 76.3 93 49.5
AT5G35945 Arabidopsis thaliana HOM05D004895 ORTHO05D003385 4.2e-12 75.5 92 48.9
Thhalv10009850m.g Eutrema salsugineum HOM05D004895 ORTHO05D003385 2.7e-11 72.8 134 38.8
BcaB02g06751 Brassica carinata HOM05D004895 ORTHO05D003385 4.7e-11 72.0 137 38.0
Carub.0002s1367 Capsella rubella HOM05D004895 ORTHO05D003385 4.7e-11 72.0 111 40.5
Thhalv10027156m.g Eutrema salsugineum HOM05D004895 ORTHO05D003385 8.0e-11 71.2 104 44.2
Sp1g05910 Schrenkiella parvula HOM05D004895 ORTHO05D003385 1.8e-10 70.1 101 43.6
BcaC04g19896 Brassica carinata HOM05D004895 ORTHO05D003385 4.0e-10 68.9 78 51.3
THA.LOC104812295 Tarenaya hassleriana HOM05D004895 ORTHO05D003385 1.2e-09 67.4 144 30.6
BcaB05g24173 Brassica carinata HOM05D004895 ORTHO05D003385 1.7e-08 63.5 138 39.1
BcaC05g24436 Brassica carinata HOM05D004895 ORTHO05D003385 6.3e-08 61.6 149 35.6
C05p03000 Brassica napus HOM05D004895 ORTHO05D003385 8.3e-08 61.2 114 39.5
BolC5t29081H Brassica oleracea HOM05D004895 ORTHO05D003385 8.3e-08 61.2 114 39.5
BcaB06g26880 Brassica carinata HOM05D004895 ORTHO05D003385 1.1e-07 60.8 143 34.3
AT3G43410 Arabidopsis thaliana HOM05D004895 ORTHO05D003385 2.4e-07 59.7 142 33.8
BcaB04g17917 Brassica carinata HOM05D004895 ORTHO05D003385 4.5e-06 55.5 143 32.2
BolC4t24743H Brassica oleracea HOM05D004895 ORTHO05D003385 5.9e-06 55.1 154 33.1


User provided reference genes

Program Settings