Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p53780 Brassica napus HOM05D005915 ORTHO05D007239 6.1e-110 401.0 226 100.0
A07p44990 Brassica napus HOM05D005915 ORTHO05D007239 5.6e-103 377.9 226 92.9
BraA07t32004Z Brassica rapa HOM05D005915 ORTHO05D007239 1.6e-102 376.3 227 93.0
BolC6t40396H Brassica oleracea HOM05D005915 ORTHO05D007239 2.6e-100 369.0 227 90.3
Sp5g35050 Schrenkiella parvula HOM05D005915 ORTHO05D007239 1.8e-85 319.7 228 83.8
BcaB02g07251 Brassica carinata HOM05D005915 ORTHO05D007239 4.3e-79 298.5 222 80.2
BcaC08g47553 Brassica carinata HOM05D005915 ORTHO05D007239 1.4e-77 293.5 221 81.4
A07p26820 Brassica napus HOM05D005915 ORTHO05D007239 1.4e-77 293.5 221 78.3
BolC6t38110H Brassica oleracea HOM05D005915 ORTHO05D007239 2.4e-77 292.7 222 76.6
C06p29450 Brassica napus HOM05D005915 ORTHO05D007239 3.1e-77 292.4 222 77.5
BraA07t30325Z Brassica rapa HOM05D005915 ORTHO05D007239 3.1e-77 292.4 222 75.7
BcaC08g45335 Brassica carinata HOM05D005915 ORTHO05D007239 1.4e-74 283.5 214 77.1
AT1G80700 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 1.6e-73 280.0 212 77.8
Carub.0002s2685 Capsella rubella HOM05D005915 ORTHO05D007239 1.3e-72 276.9 212 76.4
AL2G40740 Arabidopsis lyrata HOM05D005915 ORTHO05D007239 8.7e-72 274.2 214 77.6
Thhalv10019105m.g Eutrema salsugineum HOM05D005915 ORTHO05D007239 9.6e-71 270.8 228 76.3
AT1G80980 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 4.0e-69 265.4 212 75.5
Aa31LG4G980 Aethionema arabicum HOM05D005915 ORTHO05D007239 3.4e-52 209.1 230 60.9
THA.LOC104812439 Tarenaya hassleriana HOM05D005915 ORTHO05D007239 3.4e-44 182.6 212 59.0
Dinv23302 Davidia involucrata HOM05D005915 ORTHO05D007239 6.1e-33 145.2 194 44.8
Migut.D01097 Erythranthe guttata HOM05D005915 ORTHO05D007239 7.9e-33 144.8 169 49.7
CARHR073810 Cardamine hirsuta HOM05D005915 ORTHO05D007239 1.4e-32 144.1 113 67.3
COL.COLO4_26669 Corchorus olitorius HOM05D005915 ORTHO05D007239 2.3e-32 143.3 229 47.2
Gohir.D09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 3.9e-32 142.5 199 51.8
Rhsim08G0207800 Rhododendron simsii HOM05D005915 ORTHO05D007239 3.9e-32 142.5 198 49.5
QL02p069532 Quercus lobata HOM05D005915 ORTHO05D007239 8.8e-32 141.4 229 46.3
Actinidia25458 Actinidia chinensis HOM05D005915 ORTHO05D007239 1.5e-31 140.6 221 41.2
Gorai.006G107100 Gossypium raimondii HOM05D005915 ORTHO05D007239 9.7e-31 137.9 200 51.5
Potri.003G180500 Populus trichocarpa HOM05D005915 ORTHO05D007239 9.7e-31 137.9 198 50.5
Manes.11G064500 Manihot esculenta HOM05D005915 ORTHO05D007239 1.3e-30 137.5 187 48.1
vmacro19042 Vaccinium macrocarpon HOM05D005915 ORTHO05D007239 2.2e-30 136.7 190 48.9
TWI18G1314 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 3.7e-30 136.0 201 46.3
Gohir.A09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 8.2e-30 134.8 229 45.4
MELO3C017835.2 Cucumis melo HOM05D005915 ORTHO05D007239 4.1e-29 132.5 178 48.3
SHI11251 Sapria himalayana HOM05D005915 ORTHO05D007239 4.1e-29 132.5 181 45.9
Nitab4.5_0009423g0020 Nicotiana tabacum HOM05D005915 ORTHO05D007239 7.0e-29 131.7 203 45.3
CiPaw.01G253100 Carya illinoinensis HOM05D005915 ORTHO05D007239 9.1e-29 131.3 227 44.1
CsaV3_4G002020 Cucumis sativus L. HOM05D005915 ORTHO05D007239 9.1e-29 131.3 178 47.8
Oeu033656.3 Olea europaea HOM05D005915 ORTHO05D007239 9.1e-29 131.3 219 42.0
ClCG07G012140 Citrullus lanatus HOM05D005915 ORTHO05D007239 2.0e-28 130.2 178 47.2
SGA_v2.0_scaffold89G27484 Striga asiatica HOM05D005915 ORTHO05D007239 2.0e-28 130.2 193 45.1
Atru.chr6.915 Acer truncatum HOM05D005915 ORTHO05D007239 5.9e-28 128.6 195 48.7
Lsat_1_v5_gn_4_85741 Lactuca sativa HOM05D005915 ORTHO05D007239 1.7e-27 127.1 207 42.0
Nitab4.5_0001454g0070 Nicotiana tabacum HOM05D005915 ORTHO05D007239 2.9e-27 126.3 240 37.9
MSTRG.4689 Avicennia marina HOM05D005915 ORTHO05D007239 3.8e-27 125.9 177 49.2
Solyc03g117090.3 Solanum lycopersicum HOM05D005915 ORTHO05D007239 3.8e-27 125.9 214 41.1
BolC3t13327H Brassica oleracea HOM05D005915 ORTHO05D007239 6.5e-27 125.2 117 67.5
Sopen03g036000 Solanum pennellii HOM05D005915 ORTHO05D007239 6.5e-27 125.2 211 40.3
PGSC0003DMG400014193 Solanum tuberosum HOM05D005915 ORTHO05D007239 1.9e-26 123.6 229 40.2
Ciclev10026473m.g Citrus clementina HOM05D005915 ORTHO05D007239 2.5e-26 123.2 178 53.9
Duzib235G0368 Durio zibethinus HOM05D005915 ORTHO05D007239 2.5e-26 123.2 232 43.5
TWI12G0041 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 7.2e-26 121.7 201 44.3
PGR102G1994 Punica granatum HOM05D005915 ORTHO05D007239 9.4e-26 121.3 172 51.7
Thecc.06G038900 Theobroma cacao HOM05D005915 ORTHO05D007239 1.6e-25 120.6 126 54.0
Sabra01G0033000 Salix brachista HOM05D005915 ORTHO05D007239 2.7e-25 119.8 206 48.5
PGR142G0337 Punica granatum HOM05D005915 ORTHO05D007239 3.6e-25 119.4 205 40.0
Sed0026009 Sechium edule HOM05D005915 ORTHO05D007239 8.0e-25 118.2 221 42.1
HanXRQChr04g0107231 Helianthus annuus HOM05D005915 ORTHO05D007239 1.4e-24 117.5 153 47.1
arahy.Tifrunner.gnm1.ann1.DN9Y4W Arachis hypogaea HOM05D005915 ORTHO05D007239 1.8e-24 117.1 230 41.7
CANSAT56G1340 Cannabis sativa HOM05D005915 ORTHO05D007239 1.8e-24 117.1 156 51.3
arahy.Tifrunner.gnm1.ann1.2L8LZM Arachis hypogaea HOM05D005915 ORTHO05D007239 2.3e-24 116.7 216 43.1
MD17G1221100 Malus domestica HOM05D005915 ORTHO05D007239 2.3e-24 116.7 219 41.6
TPR.G38763 Trifolium pratense HOM05D005915 ORTHO05D007239 2.0e-23 113.6 221 43.4
FvH4_5g29190 Fragaria vesca HOM05D005915 ORTHO05D007239 3.3e-23 112.8 167 50.9
Prupe.7G069400 Prunus persica HOM05D005915 ORTHO05D007239 3.3e-23 112.8 205 44.4
Sc12g0008470 Simmondsia chinensis HOM05D005915 ORTHO05D007239 4.4e-23 112.5 225 40.4
Eucgr.J03100 Eucalyptus grandis HOM05D005915 ORTHO05D007239 7.5e-23 111.7 155 51.0
Ca_20554_v3 Cicer arietinum L. HOM05D005915 ORTHO05D007239 9.7e-23 111.3 188 38.3
Potri.001G047700 Populus trichocarpa HOM05D005915 ORTHO05D007239 1.3e-22 110.9 192 47.9
unitig_736.g22803 Utricularia gibba HOM05D005915 ORTHO05D007239 2.2e-22 110.2 158 43.7
PSO063G1890 Papaver somniferum HOM05D005915 ORTHO05D007239 2.8e-22 109.8 200 36.5
AL5G28080 Arabidopsis lyrata HOM05D005915 ORTHO05D007239 3.7e-22 109.4 103 72.8
Ah.05g171200 Amaranthus hybridus HOM05D005915 ORTHO05D007239 4.8e-22 109.0 189 45.0
EL10As5g23598 Beta vulgaris HOM05D005915 ORTHO05D007239 4.8e-22 109.0 193 40.4
ECA232G2243 Erigeron canadensis HOM05D005915 ORTHO05D007239 6.3e-22 108.6 173 41.6
CSS0040460 Camellia sinensis var. sinensis HOM05D005915 ORTHO05D007239 8.2e-22 108.2 126 61.1
TPR.G17738 Trifolium pratense HOM05D005915 ORTHO05D007239 1.1e-21 107.8 170 50.6
Glyma.08G216900 Glycine max HOM05D005915 ORTHO05D007239 1.8e-21 107.1 193 42.5
HanXRQChr09g0274531 Helianthus annuus HOM05D005915 ORTHO05D007239 1.8e-21 107.1 118 51.7
PSO782G5373 Papaver somniferum HOM05D005915 ORTHO05D007239 3.1e-21 106.3 203 36.5
VMungo0331G1031 Vigna mungo HOM05D005915 ORTHO05D007239 5.3e-21 105.5 180 46.1
Aqoxy7G03485 Aquilegia oxysepala HOM05D005915 ORTHO05D007239 1.2e-20 104.4 220 38.2
Lj3g0003301 Lotus japonicus HOM05D005915 ORTHO05D007239 1.6e-20 104.0 219 37.9
Psat7g259880 Pisum sativum HOM05D005915 ORTHO05D007239 2.7e-20 103.2 230 39.6
HPP92_016367 Vanilla planifolia HOM05D005915 ORTHO05D007239 4.5e-20 102.4 177 46.3
Hund00452 Selenicereus undatus HOM05D005915 ORTHO05D007239 1.0e-19 101.3 254 39.4
Medtr8g060830 Medicago truncatula HOM05D005915 ORTHO05D007239 1.3e-19 100.9 165 49.7
Lalb_Chr01g0012181 Lupinus albus HOM05D005915 ORTHO05D007239 1.7e-19 100.5 242 40.5
Phvul.010G159800 Phaseolus vulgaris HOM05D005915 ORTHO05D007239 2.9e-19 99.8 234 39.3
Medtr4g006550 Medicago truncatula HOM05D005915 ORTHO05D007239 3.8e-19 99.4 165 49.1
Nn2g12284 Nelumbo nucifera HOM05D005915 ORTHO05D007239 3.8e-19 99.4 226 34.1
Oeu008050.2 Olea europaea HOM05D005915 ORTHO05D007239 6.5e-19 98.6 148 44.6
SalBow6G5910 Salvia bowleyana HOM05D005915 ORTHO05D007239 1.9e-18 97.1 68 67.6
TAR633G0597 Trochodendron aralioides HOM05D005915 ORTHO05D007239 7.2e-18 95.1 196 33.7
AUR62027568 Chenopodium quinoa HOM05D005915 ORTHO05D007239 6.1e-17 92.0 202 44.6
RcHm_v2.0_Chr7g0221831 Rosa chinensis HOM05D005915 ORTHO05D007239 1.4e-16 90.9 155 43.9
PSO339G3366 Papaver somniferum HOM05D005915 ORTHO05D007239 5.2e-16 89.0 126 42.1
AUR62022762 Chenopodium quinoa HOM05D005915 ORTHO05D007239 6.8e-16 88.6 173 46.8
SEGI_14387 Sequoiadendron giganteum HOM05D005915 ORTHO05D007239 6.8e-16 88.6 161 35.4
Nitab4.5_0004330g0010 Nicotiana tabacum HOM05D005915 ORTHO05D007239 2.0e-15 87.0 115 51.3
FAN18G1559 Fragaria x ananassa HOM05D005915 ORTHO05D007239 2.6e-15 86.7 154 44.8
Zm00001eb174980 Zea mays HOM05D005915 ORTHO05D007239 4.4e-15 85.9 158 44.3
ATR1120G130 Amborella trichopoda HOM05D005915 ORTHO05D007239 7.5e-15 85.1 119 54.6
Mapoly0140s0034 Marchantia polymorpha HOM05D005915 ORTHO05D007239 2.8e-14 83.2 99 44.4
CDE05G3202 Ceratophyllum demersum HOM05D005915 ORTHO05D007239 4.1e-13 79.3 99 59.6
Cc04_g04930 Coffea canephora HOM05D005915 ORTHO05D007239 5.4e-13 79.0 119 45.4
FAN08G0623 Fragaria x ananassa HOM05D005915 ORTHO05D007239 2.7e-12 76.6 202 35.6
Dinv21397 Davidia involucrata HOM05D005915 ORTHO05D007239 3.5e-12 76.3 195 37.4
AL3G45560 Arabidopsis lyrata HOM05D004645 ORTHO05D005693 1.7e-11 73.9 64 70.3
Peaxi162Scf00332g00322 Petunia axillaris HOM05D005915 ORTHO05D007239 2.9e-11 73.2 227 30.8
Os08g0278100 Oryza sativa ssp. japonica HOM05D005915 ORTHO05D007239 2.5e-10 70.1 190 37.9
Glyma.07G025532 Glycine max HOM05D005915 ORTHO05D007239 5.5e-10 68.9 101 37.6
Haze_16650 Corylus avellana HOM05D005915 ORTHO05D007239 1.6e-09 67.4 53 64.2
Pp3c9_20610 Physcomitrium patens HOM05D005915 ORTHO05D007239 6.1e-09 65.5 177 32.2
ClCG00G004860 Citrullus lanatus HOM05D005915 ORTHO05D007239 1.8e-08 63.9 82 43.9
Actinidia25450 Actinidia chinensis HOM05D005915 ORTHO05D007239 1.2e-07 61.2 41 68.3
GSVIVG01017559001 Vitis vinifera HOM05D005915 ORTHO05D007239 1.2e-07 61.2 140 40.0
Prupe.1G199000 Prunus persica HOM05D005915 ORTHO05D007239 7.5e-07 58.5 115 48.7
Cpa.g.sc0.147 Carica papaya HOM05D005915 ORTHO05D007239 1.7e-06 57.4 119 40.3
GSVIVG01017558001 Vitis vinifera HOM05D005915 ORTHO05D007239 4.9e-06 55.8 84 38.1
CBR_g23038 Chara braunii HOM05D005915 ORTHO05D007239 6.3e-06 55.5 97 30.9


User provided reference genes

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