Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p52940 Brassica napus HOM05D007055 ORTHO05D008943 1.7e-51 206.1 134 100.0
BolC6t40312H Brassica oleracea HOM05D007055 ORTHO05D008943 9.4e-50 200.3 130 100.0
BcaC08g47470 Brassica carinata HOM05D007055 ORTHO05D008943 2.7e-49 198.7 130 98.5
BraA07t31929Z Brassica rapa HOM05D007055 ORTHO05D008943 4.7e-49 198.0 132 86.4
A07p44210 Brassica napus HOM05D007055 ORTHO05D008943 6.8e-48 194.1 130 86.2
BcaB02g08664 Brassica carinata HOM05D007055 ORTHO05D008943 7.7e-44 180.6 130 80.0
AT1G79070 Arabidopsis thaliana HOM05D007055 ORTHO05D008943 1.3e-43 179.9 130 75.4
AL2G39530 Arabidopsis lyrata HOM05D007055 ORTHO05D008943 6.6e-43 177.6 127 76.4
BcaNung04909 Brassica carinata HOM05D007055 ORTHO05D008943 3.3e-42 175.3 124 81.5
CARHR072740 Cardamine hirsuta HOM05D007055 ORTHO05D008943 1.6e-41 172.9 127 76.4
Sp5g34120 Schrenkiella parvula HOM05D007055 ORTHO05D008943 8.0e-41 170.6 130 74.6
Thhalv10019307m.g Eutrema salsugineum HOM05D007055 ORTHO05D008943 1.0e-40 170.2 127 80.3
Carub.0002s2594 Capsella rubella HOM05D007055 ORTHO05D008943 4.0e-40 168.3 127 74.8
Aa31LG4G1920 Aethionema arabicum HOM05D007055 ORTHO05D008943 3.1e-32 142.1 95 80.0
BcaC08g45387 Brassica carinata HOM05D007055 ORTHO05D008943 2.9e-30 135.6 120 68.3
THA.LOC104808116 Tarenaya hassleriana HOM05D007055 ORTHO05D008943 3.7e-30 135.2 136 58.1
COL.COLO4_07385 Corchorus olitorius HOM05D007055 ORTHO05D008943 1.3e-27 126.7 91 70.3
Manes.06G171200 Manihot esculenta HOM05D007055 ORTHO05D008943 3.0e-27 125.6 97 63.9
Thecc.09G245700 Theobroma cacao HOM05D007055 ORTHO05D008943 3.9e-27 125.2 91 70.3
Potri.011G144400 Populus trichocarpa HOM05D007055 ORTHO05D008943 6.6e-27 124.4 99 61.6
Duzib168G0293 Durio zibethinus HOM05D007055 ORTHO05D008943 1.5e-26 123.2 91 67.0
Gohir.A05G073500 Gossypium hirsutum HOM05D007055 ORTHO05D008943 1.5e-26 123.2 91 68.1
Sabra11G0128800 Salix brachista HOM05D007055 ORTHO05D008943 1.5e-26 123.2 96 63.5
Gohir.D05G076400 Gossypium hirsutum HOM05D007055 ORTHO05D008943 1.9e-26 122.9 91 68.1
Gorai.009G077700 Gossypium raimondii HOM05D007055 ORTHO05D008943 1.9e-26 122.9 91 68.1
Manes.06G170400 Manihot esculenta HOM05D007055 ORTHO05D008943 1.9e-26 122.9 100 62.0
PGR031G2131 Punica granatum HOM05D007055 ORTHO05D008943 1.9e-26 122.9 90 66.7
CANSAT56G2639 Cannabis sativa HOM05D007055 ORTHO05D008943 2.5e-26 122.5 95 65.3
Lj5A202T45 Lonicera japonica HOM05D007055 ORTHO05D008943 2.5e-26 122.5 98 64.3
arahy.Tifrunner.gnm1.ann1.FS1PG6 Arachis hypogaea HOM05D007055 ORTHO05D008943 3.3e-26 122.1 91 67.0
Hma1.2p1_0151F.1_g066890 Hydrangea macrophylla HOM05D007055 ORTHO05D008943 3.3e-26 122.1 90 67.8
arahy.Tifrunner.gnm1.ann1.4D1XNM Arachis hypogaea HOM05D007055 ORTHO05D008943 4.3e-26 121.7 91 65.9
Sc03g0007920 Simmondsia chinensis HOM05D007055 ORTHO05D008943 4.3e-26 121.7 90 68.9
Potri.008G043200 Populus trichocarpa HOM05D007055 ORTHO05D008943 1.2e-25 120.2 96 61.5
Cfa019436 Carpinus fangiana HOM05D007055 ORTHO05D008943 1.6e-25 119.8 91 65.9
Sed0014529 Sechium edule HOM05D007055 ORTHO05D008943 2.1e-25 119.4 94 63.8
MELO3C010559.2 Cucumis melo HOM05D007055 ORTHO05D008943 1.1e-24 117.1 94 61.7
Lj3g0013500 Lotus japonicus HOM05D007055 ORTHO05D008943 1.4e-24 116.7 91 65.9
CsaV3_4G031800 Cucumis sativus L. HOM05D007055 ORTHO05D008943 1.8e-24 116.3 94 61.7
ClCG11G016330 Citrullus lanatus HOM05D007055 ORTHO05D008943 2.3e-24 115.9 94 61.7
Sopen07g034550 Solanum pennellii HOM05D007055 ORTHO05D008943 2.3e-24 115.9 98 60.2
CiPaw.12G045200 Carya illinoinensis HOM05D007055 ORTHO05D008943 3.1e-24 115.5 91 64.8
Peaxi162Scf00232g01121 Petunia axillaris HOM05D007055 ORTHO05D008943 3.1e-24 115.5 91 62.6
TWI38G0074 Tripterygium wilfordii HOM05D007055 ORTHO05D008943 3.1e-24 115.5 91 63.7
Atru.chr12.2186 Acer truncatum HOM05D007055 ORTHO05D008943 4.0e-24 115.2 91 62.6
Solyc07g066370.3 Solanum lycopersicum HOM05D007055 ORTHO05D008943 4.0e-24 115.2 98 59.2
PSO541G2194 Papaver somniferum HOM05D007055 ORTHO05D008943 5.2e-24 114.8 91 62.6
PSO675G8693 Papaver somniferum HOM05D007055 ORTHO05D008943 5.2e-24 114.8 91 62.6
Phvul.005G056000 Phaseolus vulgaris HOM05D007055 ORTHO05D008943 5.2e-24 114.8 91 65.9
PGSC0003DMG400022130 Solanum tuberosum HOM05D007055 ORTHO05D008943 5.2e-24 114.8 98 59.2
CSS0027098 Camellia sinensis var. sinensis HOM05D007055 ORTHO05D008943 6.8e-24 114.4 90 62.2
FvH4_3g16000 Fragaria vesca HOM05D007055 ORTHO05D008943 6.8e-24 114.4 91 60.4
FAN11G2295 Fragaria x ananassa HOM05D007055 ORTHO05D008943 6.8e-24 114.4 91 60.4
FAN21G0096 Fragaria x ananassa HOM05D007055 ORTHO05D008943 6.8e-24 114.4 91 60.4
Glyma.08G173000 Glycine max HOM05D007055 ORTHO05D008943 6.8e-24 114.4 91 64.8
Rhsim06G0238300 Rhododendron simsii HOM05D007055 ORTHO05D008943 6.8e-24 114.4 94 60.6
FAN21G3903 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.2e-23 113.6 91 60.4
RcHm_v2.0_Chr5g0026941 Rosa chinensis HOM05D007055 ORTHO05D008943 1.2e-23 113.6 91 60.4
Lalb_Chr25g0285111 Lupinus albus HOM05D007055 ORTHO05D008943 1.5e-23 113.2 91 60.4
FAN16G3461 Fragaria x ananassa HOM05D007055 ORTHO05D008943 2.0e-23 112.8 91 59.3
Actinidia07345 Actinidia chinensis HOM05D007055 ORTHO05D008943 2.6e-23 112.5 90 62.2
Glyma.15G254500 Glycine max HOM05D007055 ORTHO05D008943 2.6e-23 112.5 91 64.8
Medtr2g069750 Medicago truncatula HOM05D007055 ORTHO05D008943 2.6e-23 112.5 97 59.8
ATR1098G113 Amborella trichopoda HOM05D007055 ORTHO05D008943 3.4e-23 112.1 92 60.9
DCAR_013747 Daucus carota HOM05D007055 ORTHO05D008943 3.4e-23 112.1 95 58.9
Lsat_1_v5_gn_7_72120 Lactuca sativa HOM05D007055 ORTHO05D008943 3.4e-23 112.1 91 60.4
Nn7g37868 Nelumbo nucifera HOM05D007055 ORTHO05D008943 3.4e-23 112.1 97 59.8
Psat1g002720 Pisum sativum HOM05D007055 ORTHO05D008943 3.4e-23 112.1 91 62.6
Manes.06G170801 Manihot esculenta HOM05D007055 ORTHO05D008943 4.4e-23 111.7 96 61.5
MD05G1216100 Malus domestica HOM05D007055 ORTHO05D008943 5.8e-23 111.3 90 63.3
SalBow5G4782 Salvia bowleyana HOM05D000091 ORTHO05D003024 7.5e-23 110.9 96 61.5
Manes.06G169900 Manihot esculenta HOM05D007055 ORTHO05D008943 9.8e-23 110.5 96 60.4
Oeu002805.1 Olea europaea HOM05D007055 ORTHO05D008943 9.8e-23 110.5 96 58.3
Hund02291 Selenicereus undatus HOM05D007055 ORTHO05D008943 1.3e-22 110.2 91 56.0
ECA240G0655 Erigeron canadensis HOM05D007055 ORTHO05D008943 1.7e-22 109.8 91 60.4
Migut.H02189 Erythranthe guttata HOM05D007055 ORTHO05D008943 2.2e-22 109.4 91 61.5
Ah.06g187070 Amaranthus hybridus HOM05D007055 ORTHO05D008943 2.9e-22 109.0 99 54.5
Duzib150G0143 Durio zibethinus HOM05D007055 ORTHO05D008943 3.7e-22 108.6 81 66.7
Aqoxy1G01599 Aquilegia oxysepala HOM05D007055 ORTHO05D008943 4.9e-22 108.2 91 57.1
Ca_03690_v3 Cicer arietinum L. HOM05D007055 ORTHO05D008943 4.9e-22 108.2 91 60.4
Ciclev10022701m.g Citrus clementina HOM05D007055 ORTHO05D008943 4.9e-22 108.2 91 61.5
Cc05_g15950 Coffea canephora HOM05D007055 ORTHO05D008943 8.3e-22 107.5 95 56.8
CAN.G943.31 Capsicum annuum HOM05D007055 ORTHO05D008943 1.1e-21 107.1 93 60.2
EL10Ac4g08563 Beta vulgaris HOM05D007055 ORTHO05D008943 1.9e-21 106.3 95 56.8
Eucgr.F03184 Eucalyptus grandis HOM05D007055 ORTHO05D008943 1.9e-21 106.3 91 61.5
MBI18_g28200_MAGBIO Magnolia biondii HOM05D007055 ORTHO05D008943 2.4e-21 105.9 91 60.4
HanXRQChr13g0408571 Helianthus annuus HOM05D007055 ORTHO05D008943 3.2e-21 105.5 90 56.7
TAR627G0757 Trochodendron aralioides HOM05D007055 ORTHO05D008943 3.2e-21 105.5 89 58.4
MSTRG.22977 Avicennia marina HOM05D007055 ORTHO05D008943 5.4e-21 104.8 90 61.1
Nitab4.5_0001749g0090 Nicotiana tabacum HOM05D007055 ORTHO05D008943 9.2e-21 104.0 127 46.5
GSVIVG01020441001 Vitis vinifera HOM05D007055 ORTHO05D008943 6.0e-20 101.3 88 61.4
Prupe.4G143100 Prunus persica HOM05D007055 ORTHO05D008943 1.7e-19 99.8 89 60.7
AUR62044625 Chenopodium quinoa HOM05D007055 ORTHO05D008943 3.0e-19 99.0 86 54.7
CDE12G0729 Ceratophyllum demersum HOM05D007055 ORTHO05D008943 6.6e-19 97.8 91 56.0
unitig_699.g19681 Utricularia gibba HOM05D007055 ORTHO05D008943 1.1e-18 97.1 90 57.8
SGA_v2.0_scaffold2G00966 Striga asiatica HOM05D007055 ORTHO05D008943 1.9e-18 96.3 90 53.3
HPP92_002254 Vanilla planifolia HOM05D007055 ORTHO05D008943 4.3e-18 95.1 82 59.8
Pp3c15_3290 Physcomitrium patens HOM05D007055 ORTHO05D008943 1.1e-16 90.5 98 45.9
Manes.06G170100 Manihot esculenta HOM05D007055 ORTHO05D008943 3.1e-16 89.0 87 54.0
Manes.06G171100 Manihot esculenta HOM05D007055 ORTHO05D008943 5.2e-16 88.2 77 58.4
Zm00001eb173230 Zea mays HOM05D007055 ORTHO05D008943 5.2e-16 88.2 93 44.1
AUR62043058 Chenopodium quinoa HOM05D007055 ORTHO05D008943 6.8e-16 87.8 131 38.9
Os08g0129900 Oryza sativa ssp. japonica HOM05D007055 ORTHO05D008943 7.6e-15 84.3 91 47.3
vmacro11656 Vaccinium macrocarpon HOM05D007055 ORTHO05D008943 1.3e-14 83.6 76 59.2
Mapoly0112s0058 Marchantia polymorpha HOM05D007055 ORTHO05D008943 2.4e-13 79.3 91 41.8
Nitab4.5_0007742g0030 Nicotiana tabacum HOM05D007055 ORTHO05D008943 4.1e-13 78.6 67 58.2
SalBow5G1530 Salvia bowleyana HOM05D000091 ORTHO05D003024 5.4e-13 78.2 68 58.8
SHI01886 Sapria himalayana HOM05D007055 ORTHO05D008943 7.1e-13 77.8 91 44.0
TPR.G9749 Trifolium pratense HOM05D007055 ORTHO05D008943 1.6e-12 76.6 55 69.1
CBR_g41533 Chara braunii HOM05D000019 ORTHO05D000048 1.0e-11 73.9 90 36.7
SMO367G1177 Selaginella moellendorffii HOM05D007055 ORTHO05D008943 4.3e-10 68.6 90 40.0
AagrBONN_evm.TU.Sc2ySwM_228.2782 Anthoceros agrestis HOM05D007055 ORTHO05D008943 1.2e-09 67.0 91 36.3
C06p30180 Brassica napus HOM05D068201 ORTHO05D042045 1.1e-08 63.9 106 39.6
BolC6t38181H Brassica oleracea HOM05D068201 ORTHO05D042045 1.1e-08 63.9 106 39.6


User provided reference genes

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