Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p52890 Brassica napus HOM05D003886 ORTHO05D004587 1.3e-263 912.5 455 100.0
BolC6t40307H Brassica oleracea HOM05D003886 ORTHO05D004587 7.7e-261 903.3 455 99.3
BcaC08g47466 Brassica carinata HOM05D003886 ORTHO05D004587 1.3e-260 902.5 455 99.3
A07p44160 Brassica napus HOM05D003886 ORTHO05D004587 3.3e-256 887.9 455 97.6
BraA07t31924Z Brassica rapa HOM05D003886 ORTHO05D004587 8.2e-255 883.2 451 98.0
Sp5g34070 Schrenkiella parvula HOM05D003886 ORTHO05D004587 9.1e-238 826.6 458 91.5
Thhalv10018536m.g Eutrema salsugineum HOM05D003886 ORTHO05D004587 1.0e-228 796.6 460 89.6
C06p30220 Brassica napus HOM05D003886 ORTHO05D004587 5.0e-228 794.3 455 90.1
BolC6t38185H Brassica oleracea HOM05D003886 ORTHO05D004587 5.0e-228 794.3 455 90.1
BraA07t30377Z Brassica rapa HOM05D003886 ORTHO05D004587 6.6e-228 793.9 457 90.6
BcaB02g07192 Brassica carinata HOM05D003886 ORTHO05D004587 1.5e-227 792.7 452 90.0
BcaC08g45391 Brassica carinata HOM05D003886 ORTHO05D004587 4.3e-227 791.2 455 89.7
A02p22460 Brassica napus HOM05D003886 ORTHO05D004587 4.0e-225 784.6 452 88.1
BraA02t07251Z Brassica rapa HOM05D003886 ORTHO05D004587 1.1e-222 776.5 451 88.2
C02p36140 Brassica napus HOM05D003886 ORTHO05D004587 2.4e-222 775.4 454 87.9
Carub.0002s2589 Capsella rubella HOM05D003886 ORTHO05D004587 3.2e-222 775.0 458 85.8
A07p27360 Brassica napus HOM05D003886 ORTHO05D004587 5.9e-221 770.8 457 89.1
AL2G39480 Arabidopsis lyrata HOM05D003886 ORTHO05D004587 1.3e-220 769.6 460 85.0
BcaC03g15859 Brassica carinata HOM05D003886 ORTHO05D004587 1.7e-220 769.2 454 87.0
AT1G79020 Arabidopsis thaliana HOM05D003886 ORTHO05D004587 3.0e-220 768.5 458 84.9
Aa31LG4G1970 Aethionema arabicum HOM05D003886 ORTHO05D004587 1.3e-207 726.5 452 84.1
THA.LOC104808112 Tarenaya hassleriana HOM05D003886 ORTHO05D004587 8.1e-202 707.2 459 79.7
Thhalv10007658m.g Eutrema salsugineum HOM05D003886 ORTHO05D004587 1.3e-191 673.3 451 78.5
Carub.0001s1642 Capsella rubella HOM05D003886 ORTHO05D004587 1.2e-189 666.8 450 77.1
AL1G28850 Arabidopsis lyrata HOM05D003886 ORTHO05D004587 1.1e-185 653.7 452 75.7
AT1G16690 Arabidopsis thaliana HOM05D003886 ORTHO05D004587 2.4e-185 652.5 450 75.3
TWI75G0340 Tripterygium wilfordii HOM05D003886 ORTHO05D004587 4.0e-185 651.7 458 72.5
CiPaw.01G092000 Carya illinoinensis HOM05D003886 ORTHO05D004587 1.5e-184 649.8 459 72.5
CARHR017150 Cardamine hirsuta HOM05D003886 ORTHO05D004587 1.7e-183 646.4 452 74.6
Thecc.06G049000 Theobroma cacao HOM05D003886 ORTHO05D004587 1.4e-182 643.3 460 72.0
QL05p085089 Quercus lobata HOM05D003886 ORTHO05D004587 1.9e-182 642.9 466 71.0
MD09G1170200 Malus domestica HOM05D003886 ORTHO05D004587 5.4e-182 641.3 451 72.3
Cfa002157 Carpinus fangiana HOM05D003886 ORTHO05D004587 7.1e-182 641.0 461 70.7
Gohir.D10G001000 Gossypium hirsutum HOM05D003886 ORTHO05D004587 2.1e-181 639.4 459 71.7
Prupe.3G028400 Prunus persica HOM05D003886 ORTHO05D004587 2.1e-181 639.4 466 71.5
Gorai.011G001300 Gossypium raimondii HOM05D003886 ORTHO05D004587 2.7e-181 639.0 459 71.7
Gohir.A10G000800 Gossypium hirsutum HOM05D003886 ORTHO05D004587 5.1e-180 634.8 459 71.5
Duzib235G0758 Durio zibethinus HOM05D003886 ORTHO05D004587 6.7e-180 634.4 459 71.2
Dinv24535 Davidia involucrata HOM05D003886 ORTHO05D004587 8.7e-180 634.0 458 71.4
MD17G1156900 Malus domestica HOM05D003886 ORTHO05D004587 9.6e-179 630.6 460 70.0
TWI12G0365 Tripterygium wilfordii HOM05D003886 ORTHO05D004587 4.8e-178 628.2 459 71.2
Sp1g14830 Schrenkiella parvula HOM05D003886 ORTHO05D004587 8.1e-178 627.5 453 75.1
Manes.15G112100 Manihot esculenta HOM05D003886 ORTHO05D004587 1.8e-177 626.3 461 70.5
Atru.chr3.1841 Acer truncatum HOM05D003886 ORTHO05D004587 9.0e-177 624.0 474 68.6
Manes.03G095300 Manihot esculenta HOM05D003886 ORTHO05D004587 2.6e-176 622.5 459 70.4
FAN09G1502 Fragaria x ananassa HOM05D003886 ORTHO05D004587 1.4e-174 616.7 461 69.6
Dinv30973 Davidia involucrata HOM05D003886 ORTHO05D004587 1.2e-173 613.6 440 71.8
GSVIVG01000280001 Vitis vinifera HOM05D003886 ORTHO05D004587 1.6e-173 613.2 459 68.8
FAN05G1128 Fragaria x ananassa HOM05D003886 ORTHO05D004587 1.0e-172 610.5 461 69.2
VMungo0464G1314 Vigna mungo HOM05D003886 ORTHO05D004587 1.8e-172 609.8 459 68.8
Phvul.004G065600 Phaseolus vulgaris HOM05D003886 ORTHO05D004587 3.0e-172 609.0 458 67.9
FAN14G1097 Fragaria x ananassa HOM05D003886 ORTHO05D004587 1.1e-171 607.1 461 69.0
Lj2g0000910 Lotus japonicus HOM05D003886 ORTHO05D004587 1.5e-171 606.7 458 69.0
FvH4_6g36310 Fragaria vesca HOM05D003886 ORTHO05D004587 1.9e-171 606.3 461 69.2
Glyma.13G045600 Glycine max HOM05D003886 ORTHO05D004587 9.6e-171 604.0 460 67.6
FAN14G2559 Fragaria x ananassa HOM05D003886 ORTHO05D004587 1.3e-170 603.6 461 69.0
Rhsim11G0111800 Rhododendron simsii HOM05D003886 ORTHO05D004587 1.3e-170 603.6 458 68.6
Glyma.19G049500 Glycine max HOM05D003886 ORTHO05D004587 2.8e-170 602.4 460 67.8
RcHm_v2.0_Chr2g0148321 Rosa chinensis HOM05D003886 ORTHO05D004587 4.8e-170 601.7 464 68.5
AUR62011474 Chenopodium quinoa HOM05D003886 ORTHO05D004587 6.2e-170 601.3 458 67.7
AUR62016582 Chenopodium quinoa HOM05D003886 ORTHO05D004587 6.2e-170 601.3 451 67.8
CANSAT01G1565 Cannabis sativa HOM05D003886 ORTHO05D004587 8.2e-170 600.9 469 67.4
Migut.N00997 Erythranthe guttata HOM05D003886 ORTHO05D004587 8.2e-170 600.9 450 68.2
Eucgr.F04066 Eucalyptus grandis HOM05D003886 ORTHO05D004587 8.2e-170 600.9 455 67.3
Actinidia17720 Actinidia chinensis HOM05D003886 ORTHO05D004587 1.4e-169 600.1 458 68.1
Lalb_Chr21g0317801 Lupinus albus HOM05D003886 ORTHO05D004587 1.8e-169 599.7 459 67.5
MSTRG.27896 Avicennia marina HOM05D003886 ORTHO05D004587 3.1e-169 599.0 450 69.3
BolC2t09627H Brassica oleracea HOM05D003886 ORTHO05D004587 4.0e-169 598.6 342 88.0
Ca_17750_v3 Cicer arietinum L. HOM05D003886 ORTHO05D004587 6.9e-169 597.8 458 66.8
HanXRQChr17g0545561 Helianthus annuus HOM05D003886 ORTHO05D004587 2.0e-168 596.3 447 69.4
Cc02_g36820 Coffea canephora HOM05D003886 ORTHO05D004587 4.5e-168 595.1 455 68.8
Ciclev10020009m.g Citrus clementina HOM05D003886 ORTHO05D004587 7.6e-168 594.3 478 66.7
PGR102G2920 Punica granatum HOM05D003886 ORTHO05D004587 7.6e-168 594.3 473 67.7
EL10Ac9g21865 Beta vulgaris HOM05D003886 ORTHO05D004587 1.7e-167 593.2 456 65.8
Sabra14G0003200 Salix brachista HOM05D003886 ORTHO05D004587 1.7e-167 593.2 481 65.7
Potri.014G000600 Populus trichocarpa HOM05D003886 ORTHO05D004587 8.4e-167 590.9 483 65.6
COL.COLO4_26802 Corchorus olitorius HOM05D003886 ORTHO05D004587 3.2e-166 589.0 459 66.7
vmacro01641 Vaccinium macrocarpon HOM05D003886 ORTHO05D004587 7.1e-166 587.8 494 64.4
Peaxi162Scf00048g01418 Petunia axillaris HOM05D003886 ORTHO05D004587 4.6e-165 585.1 446 67.3
Lalb_Chr06g0174541 Lupinus albus HOM05D003886 ORTHO05D004587 7.9e-165 584.3 454 67.0
Nn7g35782 Nelumbo nucifera HOM05D003886 ORTHO05D004587 7.9e-165 584.3 451 66.7
Duzib192G0492 Durio zibethinus HOM05D003886 ORTHO05D004587 6.7e-164 581.3 459 67.1
CSS0008969 Camellia sinensis var. sinensis HOM05D003886 ORTHO05D004587 8.7e-164 580.9 452 67.3
TAR626G1553 Trochodendron aralioides HOM05D003886 ORTHO05D004587 8.7e-164 580.9 452 67.0
Medtr8g090035 Medicago truncatula HOM05D003886 ORTHO05D004587 2.5e-163 579.3 458 66.4
Psat7g057280 Pisum sativum HOM05D003886 ORTHO05D004587 3.3e-163 578.9 461 67.0
CSS0041623 Camellia sinensis var. sinensis HOM05D003886 ORTHO05D004587 9.7e-163 577.4 450 67.3
CsaV3_1G038140 Cucumis sativus L. HOM05D003886 ORTHO05D004587 1.3e-162 577.0 446 67.0
Oeu000173.4 Olea europaea HOM05D003886 ORTHO05D004587 1.6e-162 576.6 529 57.8
TAR624G0406 Trochodendron aralioides HOM05D003886 ORTHO05D004587 3.7e-162 575.5 437 68.9
MELO3C015232.2 Cucumis melo HOM05D003886 ORTHO05D004587 4.8e-162 575.1 446 66.8
Sc24g0001760 Simmondsia chinensis HOM05D003886 ORTHO05D004587 4.8e-162 575.1 458 66.4
MSTRG.5179 Avicennia marina HOM05D003886 ORTHO05D004587 1.4e-161 573.5 431 67.7
HanXRQChr17g0570801 Helianthus annuus HOM05D003886 ORTHO05D004587 1.4e-161 573.5 448 66.5
arahy.Tifrunner.gnm1.ann1.Z0Z3SY Arachis hypogaea HOM05D003886 ORTHO05D004587 5.3e-161 571.6 486 63.2
Solyc02g081650.3 Solanum lycopersicum HOM05D003886 ORTHO05D004587 5.3e-161 571.6 449 65.0
CAN.G809.69 Capsicum annuum HOM05D003886 ORTHO05D004587 2.6e-160 569.3 449 65.5
Ah.01g020350 Amaranthus hybridus HOM05D003886 ORTHO05D004587 4.5e-160 568.5 451 65.4
Lalb_Chr04g0257491 Lupinus albus HOM05D003886 ORTHO05D004587 4.5e-160 568.5 450 64.9
Sopen02g026260 Solanum pennellii HOM05D003886 ORTHO05D004587 5.9e-160 568.2 449 64.6
PGSC0003DMG400017734 Solanum tuberosum HOM05D003886 ORTHO05D004587 5.9e-160 568.2 449 65.0
Actinidia11710 Actinidia chinensis HOM05D003886 ORTHO05D004587 2.2e-159 566.2 432 68.3
Sed0016198 Sechium edule HOM05D003886 ORTHO05D004587 3.8e-159 565.5 458 65.9
Sopen02g010650 Solanum pennellii HOM05D003886 ORTHO05D004587 4.2e-158 562.0 446 65.7
Solyc02g032300.3 Solanum lycopersicum HOM05D003886 ORTHO05D004587 5.5e-158 561.6 446 65.7
Nitab4.5_0013482g0010 Nicotiana tabacum HOM05D003886 ORTHO05D004587 1.0e-156 557.4 449 63.5
Oeu010600.1 Olea europaea HOM05D003886 ORTHO05D004587 1.0e-156 557.4 451 63.2
DCAR_022329 Daucus carota HOM05D003886 ORTHO05D004587 1.3e-156 557.0 462 65.4
Nitab4.5_0006794g0050 Nicotiana tabacum HOM05D003886 ORTHO05D004587 3.0e-156 555.8 449 63.3
Peaxi162Scf00198g01528 Petunia axillaris HOM05D003886 ORTHO05D004587 3.9e-156 555.4 450 64.4
ECA234G0089 Erigeron canadensis HOM05D003886 ORTHO05D004587 7.4e-155 551.2 448 65.0
MBI14_g11787_MAGBIO Magnolia biondii HOM05D003886 ORTHO05D004587 9.1e-153 544.3 410 68.0
TPR.G6290 Trifolium pratense HOM05D003886 ORTHO05D004587 8.5e-151 537.7 421 67.0
PSO782G4625 Papaver somniferum HOM05D003886 ORTHO05D004587 1.1e-150 537.3 456 64.5
PSO063G1610 Papaver somniferum HOM05D003886 ORTHO05D004587 2.5e-150 536.2 456 64.0
Oeu061917.1 Olea europaea HOM05D003886 ORTHO05D004587 1.0e-148 530.8 527 53.9
Lsat_1_v5_gn_3_52161 Lactuca sativa HOM05D003886 ORTHO05D004587 4.8e-146 521.9 425 64.7
HPP92_015734 Vanilla planifolia HOM05D003886 ORTHO05D004587 8.2e-146 521.2 460 60.0
unitig_699.g19834 Utricularia gibba HOM05D003886 ORTHO05D004587 2.0e-144 516.5 445 62.2
ATR0626G209 Amborella trichopoda HOM05D003886 ORTHO05D004587 5.0e-143 511.9 447 63.1
Zm00001eb308950 Zea mays HOM05D003886 ORTHO05D004587 1.5e-139 500.4 465 58.7
Aqoxy6G00358 Aquilegia oxysepala HOM05D003886 ORTHO05D004587 4.4e-139 498.8 454 59.3
Lj5C312G11 Lonicera japonica HOM05D003886 ORTHO05D004587 4.1e-137 492.3 422 62.3
Os08g0338900 Oryza sativa ssp. japonica HOM05D003886 ORTHO05D004587 5.3e-137 491.9 444 58.6
CDE03G0037 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 6.5e-135 485.0 437 61.8
CDE02G1355 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 2.7e-133 479.6 430 59.3
SHI31130 Sapria himalayana HOM05D003886 ORTHO05D004587 5.2e-132 475.3 464 58.4
ECA246G0124 Erigeron canadensis HOM05D003886 ORTHO05D004587 6.7e-132 474.9 399 64.7
arahy.Tifrunner.gnm1.ann1.78GTJP Arachis hypogaea HOM05D003886 ORTHO05D004587 2.6e-123 446.4 289 77.2
SGA_v2.0_scaffold8G04472 Striga asiatica HOM05D003886 ORTHO05D004587 4.5e-120 435.6 518 51.2
CDE06G2124 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 8.0e-117 424.9 378 59.8
CDE05G0598 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 1.8e-116 423.7 433 53.8
Ciclev10021199m.g Citrus clementina HOM05D003886 ORTHO05D004587 3.7e-114 416.0 325 66.8
AagrBONN_evm.TU.Sc2ySwM_228.1694 Anthoceros agrestis HOM05D003886 ORTHO05D004587 6.6e-111 405.2 446 51.6
Mapoly0014s0003 Marchantia polymorpha HOM05D003886 ORTHO05D004587 3.4e-107 392.9 456 49.3
SMO367G1242 Selaginella moellendorffii HOM05D003886 ORTHO05D004587 7.5e-107 391.7 466 49.6
Nitab4.5_0000389g0130 Nicotiana tabacum HOM05D003886 ORTHO05D004587 3.6e-101 372.9 250 74.8
Pp3c23_7050 Physcomitrium patens HOM05D003886 ORTHO05D004587 6.8e-100 368.6 457 46.6
ECA228G0002 Erigeron canadensis HOM05D003886 ORTHO05D004587 8.1e-93 345.1 319 59.9
ATR0751G140 Amborella trichopoda HOM05D003886 ORTHO05D004587 1.9e-89 334.0 318 59.1
CARHR072690 Cardamine hirsuta HOM05D003886 ORTHO05D004587 1.6e-88 330.9 194 85.6
Cpa.g.sc10.20 Carica papaya HOM05D003886 ORTHO05D004587 2.3e-79 300.4 194 77.3
Pp3c16_8390 Physcomitrium patens HOM05D003886 ORTHO05D004587 1.1e-76 291.6 448 41.3
Os09g0284600 Oryza sativa ssp. japonica HOM05D003886 ORTHO05D004587 3.5e-72 276.6 217 65.0
CBR_g38268 Chara braunii HOM05D003886 ORTHO05D004587 2.3e-71 273.9 297 51.2
ClCG03G018020 Citrullus lanatus HOM05D003886 ORTHO05D004587 1.1e-70 271.6 292 53.4
Ah.14g084510 Amaranthus hybridus HOM05D003886 ORTHO05D004587 1.5e-67 261.2 527 35.9
PGSC0003DMG400013092 Solanum tuberosum HOM05D003886 ORTHO05D004587 3.4e-67 260.0 193 67.4
Nn8g38501 Nelumbo nucifera HOM05D003886 ORTHO05D004587 1.1e-65 255.0 201 63.2
Cpa.g.sc10.19 Carica papaya HOM05D003886 ORTHO05D004587 1.3e-63 248.1 187 67.9
HanXRQChr08g0234351 Helianthus annuus HOM05D003886 ORTHO05D004587 4.3e-62 243.0 152 79.6
CAN.G1586.1 Capsicum annuum HOM05D003886 ORTHO05D004587 8.1e-61 238.8 237 57.4
BcaB05g25167 Brassica carinata HOM05D003886 ORTHO05D004587 4.2e-57 226.5 118 94.9
Haze_16249 Corylus avellana HOM05D003886 ORTHO05D004587 7.9e-56 222.2 264 50.0
SEGI_11104 Sequoiadendron giganteum HOM05D003886 ORTHO05D004587 1.9e-49 201.1 279 43.7
Zm00001eb097400 Zea mays HOM05D003886 ORTHO05D004587 1.3e-47 194.9 220 50.0
SEGI_16863 Sequoiadendron giganteum HOM05D003886 ORTHO05D004587 1.1e-44 185.3 170 57.1
ClCG03G018040 Citrullus lanatus HOM05D003886 ORTHO05D004587 5.3e-44 183.0 129 72.1
MCO08G116 Micromonas commoda HOM05D003886 ORTHO05D004587 4.5e-43 179.9 311 36.7
ATR0751G177 Amborella trichopoda HOM05D003886 ORTHO05D004587 7.7e-43 179.1 137 67.2
Cre03.g196400 Chlamydomonas reinhardtii HOM05D003886 ORTHO05D004587 3.3e-38 163.7 472 29.7
PRCOL_00004606 Prasinoderma coloniale HOM05D003886 ORTHO05D004587 1.7e-34 151.4 480 28.1
Aqoxy6G02601 Aquilegia oxysepala HOM05D003886 ORTHO05D004587 5.5e-33 146.4 154 54.5
Nitab4.5_0000389g0110 Nicotiana tabacum HOM05D003886 ORTHO05D004587 9.4e-33 145.6 168 47.0
GSVIVG01024509001 Vitis vinifera HOM05D003886 ORTHO05D004587 2.6e-27 127.5 79 84.8
MBI11_g15900_MAGBIO Magnolia biondii HOM05D003886 ORTHO05D004587 1.1e-25 122.1 87 65.5
Haze_16250 Corylus avellana HOM05D003886 ORTHO05D004587 7.2e-25 119.4 78 70.5
arahy.Tifrunner.gnm1.ann1.6KK5MR Arachis hypogaea HOM05D003886 ORTHO05D004587 1.0e-23 115.5 114 58.8
BcaB05g25166 Brassica carinata HOM05D000912 ORTHO05D001232 3.0e-23 114.0 73 80.8
arahy.Tifrunner.gnm1.ann1.K7FQ1R Arachis hypogaea HOM05D003886 ORTHO05D019782 2.0e-19 101.3 116 54.3
arahy.Tifrunner.gnm1.ann1.RANL81 Arachis hypogaea HOM05D003886 ORTHO05D004587 5.9e-19 99.8 157 45.2
arahy.Tifrunner.gnm1.ann1.F9GSXH Arachis hypogaea HOM05D003886 ORTHO05D019782 1.5e-17 95.1 128 46.9
Lj5C312T17 Lonicera japonica HOM05D001538 ORTHO05D004587 7.0e-12 76.3 108 45.4
SHI49864 Sapria himalayana HOM05D003886 ORTHO05D004587 5.9e-11 73.2 51 70.6
Gohir.A07G077000 Gossypium hirsutum HOM05D003886 ORTHO05D004587 2.2e-10 71.2 53 73.6
CAN.G1600.1 Capsicum annuum HOM05D003886 ORTHO05D004587 1.5e-09 68.6 63 63.5
ClCG03G018030 Citrullus lanatus HOM05D003886 ORTHO05D004587 2.5e-09 67.8 47 74.5
Lsat_1_v5_gn_7_81560 Lactuca sativa HOM05D000267 ORTHO05D029881 4.2e-09 67.0 76 52.6
SHI26090 Sapria himalayana HOM05D005069 ORTHO05D006024 5.5e-09 66.6 63 52.4
Dinv30975 Davidia involucrata HOM05D000190 ORTHO05D000113 6.8e-07 59.7 72 45.8
SHI44505 Sapria himalayana HOM05D003886 ORTHO05D009901 1.5e-06 58.5 36 69.4
TWI38G0197 Tripterygium wilfordii HOM05D002054 ORTHO05D005362 5.7e-06 56.6 154 29.9


User provided reference genes

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