Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p50690 Brassica napus HOM05D006984 ORTHO05D008773 7.8e-135 483.8 244 100.0
BolC6t40095H Brassica oleracea HOM05D006984 ORTHO05D008773 2.8e-132 475.3 238 100.0
BcaC08g47243 Brassica carinata HOM05D006984 ORTHO05D008773 1.7e-129 466.1 238 97.9
BraA07t31741Z Brassica rapa HOM05D006984 ORTHO05D008773 5.4e-128 461.1 238 96.6
A07p42120 Brassica napus HOM05D006984 ORTHO05D008773 3.1e-123 445.3 250 90.8
BcaC08g47152 Brassica carinata HOM05D006984 ORTHO05D008773 3.8e-121 438.3 240 93.3
Sp5g31620 Schrenkiella parvula HOM05D006984 ORTHO05D008773 2.8e-108 395.6 247 81.8
AT1G76450 Arabidopsis thaliana HOM05D006984 ORTHO05D008773 2.4e-107 392.5 243 82.7
AL2G36590 Arabidopsis lyrata HOM05D006984 ORTHO05D008773 1.2e-106 390.2 243 81.9
Carub.0002s2337 Capsella rubella HOM05D006984 ORTHO05D008773 3.8e-105 385.2 249 79.9
CARHR070010 Cardamine hirsuta HOM05D006984 ORTHO05D008773 7.1e-104 380.9 260 75.8
Thhalv10019042m.g Eutrema salsugineum HOM05D006984 ORTHO05D008773 3.5e-103 378.6 245 82.0
Aa31LG4G6540 Aethionema arabicum HOM05D006984 ORTHO05D008773 1.2e-95 353.6 248 71.4
THA.LOC104813736 Tarenaya hassleriana HOM05D006984 ORTHO05D008773 8.2e-76 287.7 248 62.5
Cpa.g.sc26.14 Carica papaya HOM05D006984 ORTHO05D008773 2.2e-73 279.6 197 69.5
QL02p015743 Quercus lobata HOM05D006984 ORTHO05D008773 1.4e-72 276.9 240 60.4
MELO3C026518.2 Cucumis melo HOM05D006984 ORTHO05D008773 1.9e-72 276.6 189 71.4
CsaV3_6G035930 Cucumis sativus L. HOM05D006984 ORTHO05D008773 5.5e-72 275.0 190 70.5
Ciclev10001894m.g Citrus clementina HOM05D006984 ORTHO05D008773 1.6e-71 273.5 187 73.3
Atru.chr13.60 Acer truncatum HOM05D006984 ORTHO05D008773 7.9e-71 271.2 233 61.4
Sed0024892 Sechium edule HOM05D006984 ORTHO05D008773 6.7e-70 268.1 239 59.4
CiPaw.07G133500 Carya illinoinensis HOM05D006984 ORTHO05D008773 9.7e-69 264.2 225 59.1
TWI56G0056 Tripterygium wilfordii HOM05D006984 ORTHO05D008773 1.3e-68 263.8 259 56.8
Dinv13757 Davidia involucrata HOM05D006984 ORTHO05D008773 2.8e-68 262.7 206 63.1
Thecc.08G099800 Theobroma cacao HOM05D006984 ORTHO05D008773 1.8e-67 260.0 189 68.3
GSVIVG01013427001 Vitis vinifera HOM05D006984 ORTHO05D008773 4.1e-67 258.8 194 64.9
Cfa014138 Carpinus fangiana HOM05D006984 ORTHO05D008773 5.3e-67 258.5 243 57.2
Manes.05G127800 Manihot esculenta HOM05D006984 ORTHO05D008773 1.2e-66 257.3 233 59.2
MD16G1283100 Malus domestica HOM05D006984 ORTHO05D008773 4.5e-66 255.4 251 55.0
Sabra05G0198700 Salix brachista HOM05D006984 ORTHO05D008773 5.9e-66 255.0 192 64.6
Eucgr.F01822 Eucalyptus grandis HOM05D006984 ORTHO05D008773 1.3e-65 253.8 201 61.2
RcHm_v2.0_Chr7g0216691 Rosa chinensis HOM05D006984 ORTHO05D008773 2.2e-65 253.1 191 66.0
TPR.G38185 Trifolium pratense HOM05D006984 ORTHO05D008773 2.2e-65 253.1 249 56.6
VMungo1309G1928 Vigna mungo HOM05D006984 ORTHO05D008773 8.5e-65 251.1 219 60.7
Phvul.009G008400 Phaseolus vulgaris HOM05D006984 ORTHO05D008773 1.1e-64 250.8 216 61.6
AUR62024096 Chenopodium quinoa HOM05D006984 ORTHO05D008773 1.9e-64 250.0 195 63.1
AUR62035170 Chenopodium quinoa HOM05D006984 ORTHO05D008773 1.9e-64 250.0 195 63.1
FAN18G2056 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.2e-63 247.3 191 63.9
Psat5g008560 Pisum sativum HOM05D006984 ORTHO05D008773 1.2e-63 247.3 192 65.1
Duzib116G0393 Durio zibethinus HOM05D006984 ORTHO05D008773 3.6e-63 245.7 193 64.8
EL10Ac1g01871 Beta vulgaris HOM05D006984 ORTHO05D008773 6.1e-63 245.0 201 64.7
Potri.005G256600 Populus trichocarpa HOM05D006984 ORTHO05D008773 8.0e-63 244.6 179 66.5
FvH4_5g26100 Fragaria vesca HOM05D006984 ORTHO05D008773 1.0e-62 244.2 191 63.4
Medtr3g116110 Medicago truncatula HOM05D006984 ORTHO05D008773 1.0e-62 244.2 211 60.2
Lj1g0018204 Lotus japonicus HOM05D006984 ORTHO05D008773 3.0e-62 242.7 231 55.0
Actinidia17077 Actinidia chinensis HOM05D006984 ORTHO05D008773 3.9e-62 242.3 191 59.7
ECA232G4329 Erigeron canadensis HOM05D006984 ORTHO05D008773 3.9e-62 242.3 240 51.7
CDE05G2674 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 8.8e-62 241.1 232 56.0
Lsat_1_v5_gn_9_48361 Lactuca sativa HOM05D006984 ORTHO05D008773 1.5e-61 240.4 188 60.6
arahy.Tifrunner.gnm1.ann1.QT2TB5 Arachis hypogaea HOM05D006984 ORTHO05D008773 2.0e-61 240.0 211 58.3
HanXRQChr09g0241901 Helianthus annuus HOM05D006984 ORTHO05D008773 2.0e-61 240.0 204 56.4
Prupe.5G005500 Prunus persica HOM05D006984 ORTHO05D008773 2.0e-61 240.0 191 63.4
arahy.Tifrunner.gnm1.ann1.H7AW2T Arachis hypogaea HOM05D006984 ORTHO05D008773 2.6e-61 239.6 266 51.1
CSS0020436 Camellia sinensis var. sinensis HOM05D006984 ORTHO05D008773 2.6e-61 239.6 194 60.3
Ca_15385_v3 Cicer arietinum L. HOM05D006984 ORTHO05D008773 3.3e-61 239.2 207 58.9
ClCG08G009180 Citrullus lanatus HOM05D006984 ORTHO05D008773 5.7e-61 238.4 190 65.3
Glyma.04G014500 Glycine max HOM05D006984 ORTHO05D008773 5.7e-61 238.4 225 56.0
Nn6g31626 Nelumbo nucifera HOM05D006984 ORTHO05D008773 7.4e-61 238.0 193 59.6
Peaxi162Scf00064g01321 Petunia axillaris HOM05D006984 ORTHO05D008773 9.7e-61 237.7 190 62.1
Glyma.06G014500 Glycine max HOM05D006984 ORTHO05D008773 2.2e-60 236.5 236 53.4
CAN.G208.41 Capsicum annuum HOM05D006984 ORTHO05D008773 2.8e-60 236.1 190 61.1
TAR628G1538 Trochodendron aralioides HOM05D006984 ORTHO05D008773 2.8e-60 236.1 192 59.9
vmacro21767 Vaccinium macrocarpon HOM05D006984 ORTHO05D008773 8.2e-60 234.6 189 59.8
CANSAT25G0748 Cannabis sativa HOM05D006984 ORTHO05D008773 1.4e-59 233.8 245 50.6
Oeu035863.2 Olea europaea HOM05D006984 ORTHO05D008773 2.4e-59 233.0 191 58.6
CDE05G0055 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 3.1e-59 232.6 158 69.0
Lj3P797T41 Lonicera japonica HOM05D006984 ORTHO05D008773 5.3e-59 231.9 163 66.3
Lj4A811G120 Lonicera japonica HOM05D006984 ORTHO05D008773 7.0e-59 231.5 155 68.4
Solyc12g094720.3 Solanum lycopersicum HOM05D006984 ORTHO05D008773 7.0e-59 231.5 190 60.5
Sopen12g031620 Solanum pennellii HOM05D006984 ORTHO05D008773 7.0e-59 231.5 190 60.5
FAN08G1099 Fragaria x ananassa HOM05D006984 ORTHO05D008773 9.1e-59 231.1 247 53.0
Hma1.2p1_0489F.1_g164090 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 1.2e-58 230.7 174 62.1
Cc10_g00260 Coffea canephora HOM05D006984 ORTHO05D008773 1.6e-58 230.3 199 57.8
PGSC0003DMG400029399 Solanum tuberosum HOM05D006984 ORTHO05D008773 3.5e-58 229.2 190 60.0
Haze_22863 Corylus avellana HOM05D006984 ORTHO05D008773 4.5e-58 228.8 231 54.1
Migut.N02987 Erythranthe guttata HOM05D006984 ORTHO05D008773 4.5e-58 228.8 206 56.3
FAN13G1472 Fragaria x ananassa HOM05D006984 ORTHO05D008773 4.5e-58 228.8 224 54.5
Gorai.002G221600 Gossypium raimondii HOM05D006984 ORTHO05D008773 4.5e-58 228.8 191 61.3
MBI04_g31208_MAGBIO Magnolia biondii HOM05D006984 ORTHO05D008773 7.7e-58 228.0 222 53.6
Nitab4.5_0000407g0010 Nicotiana tabacum HOM05D006984 ORTHO05D008773 7.7e-58 228.0 183 60.7
Gohir.A01G188600 Gossypium hirsutum HOM05D006984 ORTHO05D008773 1.0e-57 227.6 191 61.3
Lalb_Chr23g0265511 Lupinus albus HOM05D006984 ORTHO05D008773 1.0e-57 227.6 210 57.6
Gohir.D01G180900 Gossypium hirsutum HOM05D006984 ORTHO05D008773 2.2e-57 226.5 191 60.7
Hund01834 Selenicereus undatus HOM05D006984 ORTHO05D008773 2.2e-57 226.5 173 63.6
Os08g0512500 Oryza sativa ssp. japonica HOM05D006984 ORTHO05D008773 2.9e-57 226.1 179 62.0
SGA_v2.0_scaffold220G42646 Striga asiatica HOM05D006984 ORTHO05D008773 2.9e-57 226.1 187 60.4
MSTRG.24516 Avicennia marina HOM05D006984 ORTHO05D008773 5.0e-57 225.3 190 58.9
Aqoxy6G02992 Aquilegia oxysepala HOM05D006984 ORTHO05D008773 6.5e-57 224.9 215 54.0
Sc15g0004070 Simmondsia chinensis HOM05D006984 ORTHO05D008773 1.5e-56 223.8 153 68.0
COL.COLO4_12298 Corchorus olitorius HOM05D006984 ORTHO05D008773 9.4e-56 221.1 191 60.7
PSO541G1597 Papaver somniferum HOM05D006984 ORTHO05D008773 9.4e-56 221.1 192 59.9
ATR0001G027 Amborella trichopoda HOM05D006984 ORTHO05D008773 2.8e-52 209.5 247 47.0
FAN04G1410 Fragaria x ananassa HOM05D006984 ORTHO05D008773 2.8e-52 209.5 196 58.2
PGR083G2821 Punica granatum HOM05D006984 ORTHO05D008773 3.7e-52 209.1 234 49.1
unitig_22.g5726 Utricularia gibba HOM05D006984 ORTHO05D008773 1.2e-50 204.1 193 57.0
Rhsim06G0003200 Rhododendron simsii HOM05D006984 ORTHO05D008773 4.5e-50 202.2 296 40.5
Hma1.2p1_0489F.1_g164100 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 1.9e-48 196.8 126 70.6
Nitab4.5_0003423g0020 Nicotiana tabacum HOM05D006984 ORTHO05D008773 6.8e-46 188.3 188 52.7
Pp3c4_15070 Physcomitrium patens HOM05D006984 ORTHO05D008773 4.1e-43 179.1 237 43.5
Mapoly0008s0218 Marchantia polymorpha HOM05D006984 ORTHO05D008773 1.0e-41 174.5 191 42.9
AagrBONN_evm.TU.Sc2ySwM_117.1863 Anthoceros agrestis HOM05D006984 ORTHO05D008773 6.6e-41 171.8 205 42.9
Ah.11g041950 Amaranthus hybridus HOM05D006984 ORTHO05D008773 1.5e-37 160.6 130 63.8
Zm00001eb035340 Zea mays HOM05D006984 ORTHO05D008773 1.8e-30 137.1 136 53.7
SMO245G0004 Selaginella moellendorffii HOM05D006984 ORTHO05D008773 1.2e-29 134.4 182 35.7
CBR_g51937 Chara braunii HOM05D006984 ORTHO05D008773 1.1e-27 127.9 156 40.4
Medtr6g034285 Medicago truncatula HOM05D000394 ORTHO05D008773 1.0e-25 121.3 66 81.8
PGSC0003DMG400021762 Solanum tuberosum HOM05D006984 ORTHO05D008773 2.6e-21 106.7 91 58.2
Cre10.g446350 Chlamydomonas reinhardtii HOM05D006984 ORTHO05D008773 3.7e-20 102.8 232 32.3
PGSC0003DMG400008742 Solanum tuberosum HOM05D006984 ORTHO05D008773 3.7e-20 102.8 108 52.8
MCO13G452 Micromonas commoda HOM05D006984 ORTHO05D008773 4.1e-19 99.4 194 30.4
PRCOL_00004638 Prasinoderma coloniale HOM05D006984 ORTHO05D008773 2.5e-16 90.1 141 37.6
Sopen12g026780 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-14 84.7 75 53.3
HPP92_015474 Vanilla planifolia HOM05D006984 ORTHO05D008773 3.6e-07 59.7 51 54.9
Psat7g136640 Pisum sativum HOM05D006984 ORTHO05D008773 4.7e-07 59.3 61 49.2
Psat6g152440 Pisum sativum HOM05D006984 ORTHO05D000789 1.1e-06 58.2 32 81.2
Psat6g152480 Pisum sativum HOM05D006984 ORTHO05D008773 1.1e-06 58.2 32 81.2


User provided reference genes

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