Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g47277 Brassica carinata HOM05D014797 ORTHO05D016596 4.1e-51 204.9 143 100.0
C06p50190 Brassica napus HOM05D014797 ORTHO05D016596 4.1e-51 204.9 143 100.0
BolC6t40059H Brassica oleracea HOM05D014797 ORTHO05D016596 4.1e-51 204.9 143 100.0
A07p41800 Brassica napus HOM05D014797 ORTHO05D016596 8.5e-49 197.2 143 82.5
BraA07t31710Z Brassica rapa HOM05D014797 ORTHO05D016596 8.5e-49 197.2 143 97.2
BcaC08g47276 Brassica carinata HOM05D014797 ORTHO05D016596 2.9e-41 172.2 140 92.1
BraA08t34557Z Brassica rapa HOM05D001879 ORTHO05D007957 4.9e-12 75.1 149 41.6
AL2G36300 Arabidopsis lyrata HOM05D014797 ORTHO05D016596 2.7e-10 69.3 141 41.8
Thhalv10009529m.g Eutrema salsugineum HOM05D014797 ORTHO05D016596 1.3e-09 67.0 157 57.3
CARHR069790 Cardamine hirsuta HOM05D014797 ORTHO05D016596 1.9e-08 63.2 135 37.8
CARHR020580 Cardamine hirsuta HOM05D008819 ORTHO05D003197 2.8e-07 59.3 69 53.6
BolC5t30570H Brassica oleracea HOM05D008819 ORTHO05D003197 1.8e-06 56.6 61 49.2
BcaB07g32025 Brassica carinata HOM05D008819 ORTHO05D003197 5.2e-06 55.1 72 45.8
BcaC05g25908 Brassica carinata HOM05D008819 ORTHO05D003197 6.8e-06 54.7 61 47.5
C05p18590 Brassica napus HOM05D008819 ORTHO05D003197 6.8e-06 54.7 61 47.5
Carub.0001s1963 Capsella rubella HOM05D008819 ORTHO05D003197 6.8e-06 54.7 71 49.3
Thhalv10019693m.g Eutrema salsugineum HOM05D008819 ORTHO05D003197 6.8e-06 54.7 63 49.2
Sp5g31000 Schrenkiella parvula HOM05D008819 ORTHO05D003197 6.8e-06 54.7 64 48.4
BraA06t24727Z Brassica rapa HOM05D008819 ORTHO05D003197 8.9e-06 54.3 66 43.9


User provided reference genes

Program Settings