Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p50180 Brassica napus HOM05D003240 ORTHO05D017535 5.9e-239 830.5 426 100.0
BolC6t40058H Brassica oleracea HOM05D003240 ORTHO05D017535 1.9e-237 825.5 426 99.8
BcaC08g47278 Brassica carinata HOM05D003240 ORTHO05D017535 2.9e-217 758.4 423 93.6
A08p33410 Brassica napus HOM05D003240 ORTHO05D017535 1.2e-204 716.5 423 89.6
BraA03t12219Z Brassica rapa HOM05D003240 ORTHO05D017535 6.2e-204 714.1 423 89.4
BcaC02g08188 Brassica carinata HOM05D003240 ORTHO05D017535 4.6e-199 698.0 412 90.5
BcaNung03344 Brassica carinata HOM05D003240 ORTHO05D017535 5.6e-189 664.5 408 87.3
BolC7t42862H Brassica oleracea HOM05D003240 ORTHO05D017535 1.3e-177 626.7 367 89.6
C04p57490 Brassica napus HOM05D003240 ORTHO05D017535 6.2e-172 607.8 332 95.5
C07p23280 Brassica napus HOM05D003240 ORTHO05D100423 2.2e-137 493.0 284 89.8
BcaC01g01758 Brassica carinata HOM05D003240 ORTHO05D032152 7.1e-91 338.6 438 52.1
BraA02t06117Z Brassica rapa HOM05D003240 ORTHO05D019881 1.7e-89 334.0 435 52.6
C07p62190 Brassica napus HOM05D003240 ORTHO05D019881 7.3e-88 328.6 435 52.2
C03p92080 Brassica napus HOM05D003240 ORTHO05D024027 6.8e-86 322.0 425 51.5
BcaC03g18230 Brassica carinata HOM05D003240 ORTHO05D024027 1.9e-83 313.9 417 51.1
BcaC07g36928 Brassica carinata HOM05D003240 ORTHO05D024027 2.1e-79 300.4 423 49.2
C03p72200 Brassica napus HOM05D003240 ORTHO05D032152 8.7e-73 278.5 361 52.1
BolC3t19516H Brassica oleracea HOM05D003240 ORTHO05D032152 8.7e-73 278.5 361 52.1
A10p20120 Brassica napus HOM05D003240 ORTHO05D032928 1.6e-71 274.2 429 49.9
BcaC09g47943 Brassica carinata HOM05D003240 ORTHO05D021783 2.8e-71 273.5 404 48.5
BolC8t49585H Brassica oleracea HOM05D003240 ORTHO05D024027 2.6e-69 266.9 432 45.6
BolC1t05880H Brassica oleracea HOM05D003240 ORTHO05D024027 2.7e-66 256.9 432 44.4
C09p56640 Brassica napus HOM05D003240 ORTHO05D103622 5.6e-64 249.2 286 55.2
A09p11060 Brassica napus HOM05D003240 ORTHO05D019881 3.7e-63 246.5 432 43.3
BcaC05g26272 Brassica carinata HOM05D003240 ORTHO05D032928 1.2e-61 241.5 430 46.3
BraA03t10651Z Brassica rapa HOM05D003240 ORTHO05D032928 1.1e-59 235.0 424 45.3
BcaC06g31611 Brassica carinata HOM05D003240 ORTHO05D091789 3.2e-59 233.4 404 44.1
C07p43830 Brassica napus HOM05D003240 ORTHO05D101579 1.1e-51 208.4 122 92.6
A08p21510 Brassica napus HOM05D003240 ORTHO05D016738 7.1e-51 205.7 390 43.6
BraA08t34100Z Brassica rapa HOM05D003240 ORTHO05D016738 7.1e-51 205.7 390 43.6
A09p39950 Brassica napus HOM05D003240 ORTHO05D021783 1.6e-50 204.5 358 45.0
C06p44710 Brassica napus HOM05D003240 ORTHO05D017503 2.1e-50 204.1 394 42.1
BcaNung00147 Brassica carinata HOM05D003240 ORTHO05D019881 1.3e-49 201.4 424 37.5
C01p00460 Brassica napus HOM05D003240 ORTHO05D016738 3.9e-49 199.9 390 44.1
C07p46390 Brassica napus HOM05D003240 ORTHO05D016738 2.5e-48 197.2 389 42.7
BolC7t45157H Brassica oleracea HOM05D003240 ORTHO05D016738 2.5e-48 197.2 389 42.7
C01p15500 Brassica napus HOM05D003240 ORTHO05D096677 1.3e-47 194.9 228 54.4
BcaNung03688 Brassica carinata HOM05D003240 ORTHO05D019881 2.4e-46 190.7 427 37.5
BolC3t17954H Brassica oleracea HOM05D003240 ORTHO05D016738 1.0e-44 185.3 356 43.3
BcaC06g32208 Brassica carinata HOM05D003240 ORTHO05D021783 1.3e-44 184.9 404 40.3
C09p01740 Brassica napus HOM05D003240 ORTHO05D021783 2.2e-44 184.1 344 43.3
C02p62990 Brassica napus HOM05D003240 ORTHO05D042544 8.5e-44 182.2 306 44.1
BolC2t12373H Brassica oleracea HOM05D003240 ORTHO05D042544 8.5e-44 182.2 306 44.1
BolC8t51497H Brassica oleracea HOM05D003240 ORTHO05D016738 1.4e-43 181.4 358 42.7
BcaB02g07983 Brassica carinata HOM05D003240 ORTHO05D017503 2.5e-43 180.6 384 40.6
C08p00720 Brassica napus HOM05D003240 ORTHO05D016738 1.6e-42 177.9 306 44.8
BcaC08g43497 Brassica carinata HOM05D003240 ORTHO05D017503 2.1e-42 177.6 397 39.0
BcaB01g03865 Brassica carinata HOM05D003240 ORTHO05D094508 2.3e-41 174.1 401 38.2
C03p56700 Brassica napus HOM05D003240 ORTHO05D016738 2.0e-37 161.0 164 62.2
BolC1t00874H Brassica oleracea HOM05D003240 ORTHO05D023867 2.2e-36 157.5 174 56.3
BcaC07g39783 Brassica carinata HOM05D003240 ORTHO05D023867 6.5e-36 156.0 172 57.0
BcaC07g41988 Brassica carinata HOM05D003240 ORTHO05D021783 1.1e-35 155.2 279 43.0
C01p15510 Brassica napus HOM05D003240 ORTHO05D103301 1.1e-35 155.2 191 55.5
C09p63070 Brassica napus HOM05D003240 ORTHO05D023867 1.9e-35 154.5 161 60.9
C04p42100 Brassica napus HOM05D003240 ORTHO05D099985 1.8e-33 147.9 267 42.3
BcaB02g08739 Brassica carinata HOM05D010232 ORTHO05D023893 9.1e-30 135.6 437 34.8
C03p21650 Brassica napus HOM05D012417 ORTHO05D024193 1.2e-29 135.2 433 33.9
BolC3t14549H Brassica oleracea HOM05D012417 ORTHO05D024193 1.2e-29 135.2 433 33.9
BcaC01g00646 Brassica carinata HOM05D003240 ORTHO05D027650 4.5e-29 133.3 197 50.8
C02p63910 Brassica napus HOM05D003240 ORTHO05D027650 7.7e-29 132.5 196 49.0
C07p16840 Brassica napus HOM05D003240 ORTHO05D027650 1.0e-28 132.1 196 49.0
BolC4t25249H Brassica oleracea HOM05D003240 ORTHO05D104461 1.0e-28 132.1 106 71.7
BraA03t12127Z Brassica rapa HOM05D003240 ORTHO05D019967 1.3e-28 131.7 361 38.8
C02p12300 Brassica napus HOM05D003240 ORTHO05D027650 8.5e-28 129.0 197 49.7
BcaC05g27248 Brassica carinata HOM05D010232 ORTHO05D023893 4.2e-27 126.7 456 34.4
BolC5t34528H Brassica oleracea HOM05D003240 ORTHO05D019881 7.2e-27 125.9 105 66.7
BraA08t34244Z Brassica rapa HOM05D010232 ORTHO05D016018 7.2e-27 125.9 429 35.4
C05p58750 Brassica napus HOM05D003240 ORTHO05D019881 8.0e-26 122.5 105 64.8
BcaC05g26508 Brassica carinata HOM05D003240 ORTHO05D023867 1.4e-25 121.7 136 58.8
BolC5t31284H Brassica oleracea HOM05D003240 ORTHO05D023867 1.4e-25 121.7 136 58.8
C03p51870 Brassica napus HOM05D012445 ORTHO05D018631 1.8e-25 121.3 448 35.0
BraA02t08299Z Brassica rapa HOM05D002233 ORTHO05D002299 1.8e-25 121.3 172 53.5
BolC4t25181H Brassica oleracea HOM05D003240 ORTHO05D107020 3.9e-25 120.2 135 57.0
BcaNung01267 Brassica carinata HOM05D003240 ORTHO05D016738 5.2e-25 119.8 373 34.3
C01p20310 Brassica napus HOM05D002197 ORTHO05D002462 5.7e-24 116.3 129 59.7
BraA03t13996Z Brassica rapa HOM05D012445 ORTHO05D018631 5.7e-24 116.3 446 33.6
BcaC06g35455 Brassica carinata HOM05D012417 ORTHO05D024193 7.4e-24 115.9 389 33.7
C03p75630 Brassica napus HOM05D008956 ORTHO05D013254 7.4e-24 115.9 151 48.3
BcaB04g21282 Brassica carinata HOM05D010232 ORTHO05D016018 2.8e-23 114.0 449 34.7
BraA09t36164Z Brassica rapa HOM05D012445 ORTHO05D018631 2.8e-23 114.0 444 33.8
BcaB07g33779 Brassica carinata HOM05D003240 ORTHO05D091816 4.8e-23 113.2 143 48.3
BcaC03g13399 Brassica carinata HOM05D012417 ORTHO05D024193 4.8e-23 113.2 386 32.9
BraA04t17515Z Brassica rapa HOM05D012445 ORTHO05D018631 6.3e-23 112.8 439 33.0
BcaC02g12174 Brassica carinata HOM05D003240 ORTHO05D094064 8.2e-23 112.5 177 48.0
A08p22750 Brassica napus HOM05D010232 ORTHO05D016018 1.8e-22 111.3 206 42.2
BcaC04g24027 Brassica carinata HOM05D012417 ORTHO05D024193 1.2e-21 108.6 138 52.9
BolC3t12902H Brassica oleracea HOM05D008956 ORTHO05D013254 1.2e-21 108.6 206 41.3
C09p34960 Brassica napus HOM05D010232 ORTHO05D016018 2.0e-21 107.8 222 40.5
C05p62330 Brassica napus HOM05D003240 ORTHO05D019895 3.5e-21 107.1 127 56.7
BcaC08g43321 Brassica carinata HOM05D010232 ORTHO05D023893 4.5e-21 106.7 372 35.2
BolC4t27983H Brassica oleracea HOM05D008956 ORTHO05D013254 5.9e-21 106.3 144 51.4
A07p12250 Brassica napus HOM05D003240 ORTHO05D102247 1.0e-20 105.5 61 86.9
BolC1t00828H Brassica oleracea HOM05D010232 ORTHO05D016018 1.3e-20 105.1 222 39.6
BraA02t06360Z Brassica rapa HOM05D008956 ORTHO05D013254 1.3e-20 105.1 144 47.2
C07p30560 Brassica napus HOM05D003240 ORTHO05D039579 2.2e-20 104.4 206 40.8
C09p73110 Brassica napus HOM05D003240 ORTHO05D040560 3.8e-20 103.6 369 31.7
BcaC09g51848 Brassica carinata HOM05D010232 ORTHO05D016018 6.5e-20 102.8 424 31.6
BcaC06g33134 Brassica carinata HOM05D003240 ORTHO05D094083 8.5e-20 102.4 107 60.7
C03p03630 Brassica napus HOM05D008956 ORTHO05D013254 1.9e-19 101.3 207 40.1
BcaC08g46075 Brassica carinata HOM05D003240 ORTHO05D019967 2.5e-19 100.9 334 35.0
BcaB05g23955 Brassica carinata HOM05D019895 ORTHO05D019895 3.2e-19 100.5 126 54.8
BcaC02g12116 Brassica carinata HOM05D003240 ORTHO05D039579 3.2e-19 100.5 199 40.7
C06p39900 Brassica napus HOM05D008956 ORTHO05D101413 3.2e-19 100.5 105 54.3
BcaB07g31032 Brassica carinata HOM05D003240 ORTHO05D019895 7.2e-19 99.4 121 57.9
BcaC06g33773 Brassica carinata HOM05D013416 ORTHO05D024230 1.2e-18 98.6 223 38.6
C08p03380 Brassica napus HOM05D008956 ORTHO05D016720 1.6e-18 98.2 95 60.0
BolC3t17473H Brassica oleracea HOM05D012445 ORTHO05D018631 2.1e-18 97.8 415 33.3
BcaB02g07535 Brassica carinata HOM05D019895 ORTHO05D019895 4.7e-18 96.7 121 53.7
C01p08510 Brassica napus HOM05D010232 ORTHO05D016018 1.4e-17 95.1 209 39.7
C03p42360 Brassica napus HOM05D008956 ORTHO05D013254 2.3e-17 94.4 140 45.7
C06p08310 Brassica napus HOM05D008956 ORTHO05D016720 2.3e-17 94.4 100 56.0
C01p08460 Brassica napus HOM05D010232 ORTHO05D016018 3.0e-17 94.0 222 37.4
C09p65770 Brassica napus HOM05D008956 ORTHO05D013254 4.0e-17 93.6 200 39.0
BolC6t36746H Brassica oleracea HOM05D012445 ORTHO05D040835 5.2e-17 93.2 104 59.6
BcaC03g17495 Brassica carinata HOM05D001104 ORTHO05D006624 6.8e-17 92.8 172 41.3
BolC9t59399H Brassica oleracea HOM05D008956 ORTHO05D105535 8.8e-17 92.4 130 50.0
A03p12700 Brassica napus HOM05D003240 ORTHO05D100875 1.2e-16 92.0 120 52.5
C09p16440 Brassica napus HOM05D012445 ORTHO05D040835 2.0e-16 91.3 104 59.6
C02p54520 Brassica napus HOM05D001104 ORTHO05D006624 3.4e-16 90.5 165 41.2
C07p36910 Brassica napus HOM05D008956 ORTHO05D013254 3.4e-16 90.5 340 33.2
BolC7t44203H Brassica oleracea HOM05D008956 ORTHO05D013254 3.4e-16 90.5 340 33.2
BraA03t14966Z Brassica rapa HOM05D008956 ORTHO05D016720 1.3e-15 88.6 101 55.4
BcaC08g43240 Brassica carinata HOM05D013416 ORTHO05D024230 1.7e-15 88.2 223 36.3
C06p08830 Brassica napus HOM05D003240 ORTHO05D009426 3.7e-15 87.0 250 34.8
BolC6t35961H Brassica oleracea HOM05D003240 ORTHO05D017503 4.8e-15 86.7 270 33.3
BcaB08g36836 Brassica carinata HOM05D008956 ORTHO05D090626 8.3e-15 85.9 331 31.4
C06p40860 Brassica napus HOM05D012445 ORTHO05D041381 8.3e-15 85.9 158 47.5
BolC6t39347H Brassica oleracea HOM05D012445 ORTHO05D041381 1.1e-14 85.5 158 47.5
BolC6t39565H Brassica oleracea HOM05D008956 ORTHO05D013254 1.1e-14 85.5 310 32.6
BcaB03g14123 Brassica carinata HOM05D010928 ORTHO05D090945 1.4e-14 85.1 280 33.2
BcaC08g43627 Brassica carinata HOM05D010232 ORTHO05D090808 2.4e-14 84.3 202 38.6
C06p45070 Brassica napus HOM05D008956 ORTHO05D013254 2.4e-14 84.3 317 33.1
BolC6t39036H Brassica oleracea HOM05D003240 ORTHO05D019967 4.1e-14 83.6 264 35.2
C01p00010 Brassica napus HOM05D010928 ORTHO05D016821 5.4e-14 83.2 194 37.6
C02p54570 Brassica napus HOM05D001104 ORTHO05D006624 9.1e-14 82.4 165 40.0
BcaNung03034 Brassica carinata HOM05D010928 ORTHO05D094015 2.7e-13 80.9 300 33.0
BraA01t00344Z Brassica rapa HOM05D010928 ORTHO05D016821 5.9e-13 79.7 191 36.1
BraA04t18895Z Brassica rapa HOM05D010893 ORTHO05D039094 1.0e-12 79.0 117 49.6
BcaC07g42699 Brassica carinata HOM05D010928 ORTHO05D090478 1.3e-12 78.6 276 33.0
BNapus_Darmor_BZH_scaffold_109p00210 Brassica napus HOM05D011346 ORTHO05D015475 1.3e-12 78.6 86 60.5
C08p50480 Brassica napus HOM05D003240 ORTHO05D101800 1.3e-12 78.6 115 48.7
BcaC07g39648 Brassica carinata HOM05D003240 ORTHO05D095172 1.7e-12 78.2 84 61.9
C07p48040 Brassica napus HOM05D011346 ORTHO05D015475 2.2e-12 77.8 92 58.7
BraA01t00731Z Brassica rapa HOM05D010928 ORTHO05D016821 2.9e-12 77.4 76 57.9
C07p01490 Brassica napus HOM05D010928 ORTHO05D016821 3.8e-12 77.0 76 57.9
C07p57580 Brassica napus HOM05D010928 ORTHO05D016821 5.0e-12 76.6 76 56.6
C06p51070 Brassica napus HOM05D011346 ORTHO05D015475 6.5e-12 76.3 87 59.8
BcaB01g05158 Brassica carinata HOM05D010893 ORTHO05D016035 1.1e-11 75.5 120 46.7
BcaC03g17650 Brassica carinata HOM05D000109 ORTHO05D000210 1.1e-11 75.5 222 36.9
BraA01t01392Z Brassica rapa HOM05D011346 ORTHO05D015475 1.1e-11 75.5 86 58.1
BraA08t34218Z Brassica rapa HOM05D010893 ORTHO05D016035 1.1e-11 75.5 97 50.5
BolC7t45517H Brassica oleracea HOM05D010928 ORTHO05D016821 1.9e-11 74.7 194 36.1
C08p07080 Brassica napus HOM05D010893 ORTHO05D016035 2.5e-11 74.3 97 49.5
BolC8t47552H Brassica oleracea HOM05D010893 ORTHO05D016035 2.5e-11 74.3 97 49.5
BraA09t39506Z Brassica rapa HOM05D011346 ORTHO05D043120 2.5e-11 74.3 86 58.1
BcaB01g01362 Brassica carinata HOM05D009754 ORTHO05D020043 3.2e-11 73.9 97 56.7
C04p03050 Brassica napus HOM05D011346 ORTHO05D015475 4.2e-11 73.6 87 58.6
BolC1t01225H Brassica oleracea HOM05D011346 ORTHO05D015475 4.2e-11 73.6 87 57.5
BolC4t21947H Brassica oleracea HOM05D011346 ORTHO05D015475 4.2e-11 73.6 87 58.6
BolC4t22353H Brassica oleracea HOM05D011346 ORTHO05D106028 5.5e-11 73.2 87 58.6
BolC9t53578H Brassica oleracea HOM05D011346 ORTHO05D043120 5.5e-11 73.2 87 57.5
A06p33010 Brassica napus HOM05D003240 ORTHO05D098331 7.2e-11 72.8 84 57.1
BcaB03g11771 Brassica carinata HOM05D010928 ORTHO05D091924 9.4e-11 72.4 64 65.6
C04p07300 Brassica napus HOM05D011346 ORTHO05D015475 9.4e-11 72.4 86 59.3
C03p09920 Brassica napus HOM05D010893 ORTHO05D016035 1.2e-10 72.0 97 49.5
C04p69810 Brassica napus HOM05D011346 ORTHO05D099510 1.2e-10 72.0 87 57.5
BcaC03g17878 Brassica carinata HOM05D010928 ORTHO05D016821 1.6e-10 71.6 64 64.1
BolC3t12674H Brassica oleracea HOM05D010928 ORTHO05D016821 1.6e-10 71.6 76 56.6
C09p71790 Brassica napus HOM05D003240 ORTHO05D097945 2.7e-10 70.9 141 44.0
BraA02t06847Z Brassica rapa HOM05D003240 ORTHO05D108150 3.6e-10 70.5 70 54.3
BolC5t28988H Brassica oleracea HOM05D010928 ORTHO05D016821 8.0e-10 69.3 76 56.6
BcaC02g11293 Brassica carinata HOM05D008956 ORTHO05D013254 1.4e-09 68.6 169 36.1
BcaC02g07870 Brassica carinata HOM05D010893 ORTHO05D016035 1.8e-09 68.2 97 45.4
BolC2t11520H Brassica oleracea HOM05D001104 ORTHO05D006624 1.8e-09 68.2 76 56.6
BcaC06g32745 Brassica carinata HOM05D009754 ORTHO05D020043 2.3e-09 67.8 104 51.9
BraA08t34184Z Brassica rapa HOM05D009754 ORTHO05D020043 2.3e-09 67.8 106 50.9
C02p59180 Brassica napus HOM05D010928 ORTHO05D103551 3.0e-09 67.4 63 63.5
BraA10t43860Z Brassica rapa HOM05D009754 ORTHO05D020043 4.0e-09 67.0 106 50.0
C06p44540 Brassica napus HOM05D009754 ORTHO05D027209 5.2e-09 66.6 96 52.1
C04p67930 Brassica napus HOM05D008956 ORTHO05D098482 8.8e-09 65.9 71 54.9
C07p35510 Brassica napus HOM05D008956 ORTHO05D016720 1.2e-08 65.5 289 31.5
BolC7t44074H Brassica oleracea HOM05D008956 ORTHO05D016720 1.2e-08 65.5 289 31.5
BcaC07g38101 Brassica carinata HOM05D009754 ORTHO05D027209 2.0e-08 64.7 142 43.0
C02p29070 Brassica napus HOM05D009754 ORTHO05D020043 2.6e-08 64.3 104 50.0
BcaC08g44168 Brassica carinata HOM05D010928 ORTHO05D093445 9.8e-08 62.4 64 64.1
BolC9t60045H Brassica oleracea HOM05D003240 ORTHO05D040560 2.2e-07 61.2 127 41.7
BcaC04g18681 Brassica carinata HOM05D009754 ORTHO05D027209 3.7e-07 60.5 139 43.9
BcaC08g47238 Brassica carinata HOM05D010893 ORTHO05D032352 3.7e-07 60.5 149 42.3
C02p52290 Brassica napus HOM05D003240 ORTHO05D101137 3.7e-07 60.5 179 39.1
C06p08520 Brassica napus HOM05D011346 ORTHO05D015475 3.7e-07 60.5 71 57.7
C06p51590 Brassica napus HOM05D003240 ORTHO05D103766 6.3e-07 59.7 122 41.0
BolC2t10052H Brassica oleracea HOM05D011556 ORTHO05D014123 7.0e-06 56.2 78 48.7
C04p72720 Brassica napus HOM05D009754 ORTHO05D014123 9.1e-06 55.8 107 42.1


User provided reference genes

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