Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p50100 Brassica napus HOM05D005792 ORTHO05D007171 1.4e-170 602.8 300 100.0
BcaC08g47286 Brassica carinata HOM05D005792 ORTHO05D007171 2.5e-167 592.0 310 96.5
BraA07t31701Z Brassica rapa HOM05D005792 ORTHO05D007171 9.5e-167 590.1 300 97.0
A07p41720 Brassica napus HOM05D005792 ORTHO05D007171 7.0e-162 573.9 300 94.3
BcaNung05119 Brassica carinata HOM05D005792 ORTHO05D007171 2.8e-158 562.0 310 91.9
AT1G76150 Arabidopsis thaliana HOM05D005792 ORTHO05D007171 6.8e-157 557.4 310 88.7
BolC6t40050H Brassica oleracea HOM05D005792 ORTHO05D007171 6.8e-157 557.4 347 83.6
AL2G36210 Arabidopsis lyrata HOM05D005792 ORTHO05D007171 9.8e-156 553.5 310 87.4
Thhalv10018917m.g Eutrema salsugineum HOM05D005792 ORTHO05D007171 6.4e-155 550.8 310 88.7
Sp5g31280 Schrenkiella parvula HOM05D005792 ORTHO05D007171 2.7e-153 545.4 311 88.4
Carub.0002s2304 Capsella rubella HOM05D005792 ORTHO05D007171 3.5e-153 545.0 310 86.8
CARHR069700 Cardamine hirsuta HOM05D005792 ORTHO05D007171 8.6e-152 540.4 310 86.8
Aa31LG4G6270 Aethionema arabicum HOM05D005792 ORTHO05D007171 3.7e-147 525.0 300 85.3
THA.LOC104813765 Tarenaya hassleriana HOM05D005792 ORTHO05D007171 1.4e-141 506.5 310 81.3
BcaC08g47109 Brassica carinata HOM05D005792 ORTHO05D007171 1.8e-133 479.6 304 82.6
Potri.005G247600 Populus trichocarpa HOM05D005792 ORTHO05D007171 3.0e-128 462.2 309 72.2
Manes.18G007700 Manihot esculenta HOM05D005792 ORTHO05D007171 3.9e-128 461.8 305 72.8
Prupe.1G357300 Prunus persica HOM05D005792 ORTHO05D007171 1.8e-125 453.0 310 70.6
Thecc.08G054700 Theobroma cacao HOM05D005792 ORTHO05D007171 3.1e-125 452.2 305 72.8
TWI36G1625 Tripterygium wilfordii HOM05D005792 ORTHO05D007171 6.9e-125 451.1 308 72.1
CsaV3_2G024540 Cucumis sativus L. HOM05D005792 ORTHO05D007171 7.6e-124 447.6 310 70.0
CiPaw.08G070700 Carya illinoinensis HOM05D005792 ORTHO05D007171 1.7e-123 446.4 308 70.1
Atru.chr13.181 Acer truncatum HOM05D005792 ORTHO05D007171 4.9e-123 444.9 309 71.8
Glyma.06G019900 Glycine max HOM05D005792 ORTHO05D007171 6.4e-123 444.5 307 70.7
Eucgr.F01710 Eucalyptus grandis HOM05D005792 ORTHO05D007171 1.4e-122 443.4 310 68.7
Ca_15448_v3 Cicer arietinum L. HOM05D005792 ORTHO05D007171 3.2e-122 442.2 308 68.8
Lalb_Chr23g0265871 Lupinus albus HOM05D005792 ORTHO05D007171 3.2e-122 442.2 308 68.2
MELO3C011330.2 Cucumis melo HOM05D005792 ORTHO05D007171 5.5e-122 441.4 324 67.0
CiPaw.08G070500 Carya illinoinensis HOM05D005792 ORTHO05D007171 9.3e-122 440.7 308 69.5
Atru.chr13.183 Acer truncatum HOM05D005792 ORTHO05D007171 2.7e-121 439.1 310 69.0
FvH4_2g37800 Fragaria vesca HOM05D005792 ORTHO05D007171 1.8e-120 436.4 304 70.1
CANSAT51G0003 Cannabis sativa HOM05D005792 ORTHO05D007171 6.7e-120 434.5 310 69.0
Glyma.04G019600 Glycine max HOM05D005792 ORTHO05D007171 8.7e-120 434.1 314 68.2
VMungo1309G0997 Vigna mungo HOM05D005792 ORTHO05D007171 8.7e-120 434.1 305 68.2
Manes.05G141100 Manihot esculenta HOM05D005792 ORTHO05D007171 3.3e-119 432.2 307 68.1
Gohir.D05G256800 Gossypium hirsutum HOM05D005792 ORTHO05D007171 5.6e-119 431.4 308 66.9
RcHm_v2.0_Chr6g0303911 Rosa chinensis HOM05D005792 ORTHO05D007171 5.6e-119 431.4 305 68.9
Gorai.009G268300 Gossypium raimondii HOM05D005792 ORTHO05D007171 7.4e-119 431.0 308 66.9
Lj1g0011663 Lotus japonicus HOM05D005792 ORTHO05D007171 9.6e-119 430.6 304 68.1
QL02p013536 Quercus lobata HOM05D005792 ORTHO05D007171 9.6e-119 430.6 314 66.9
Duzib093G0813 Durio zibethinus HOM05D005792 ORTHO05D007171 1.6e-118 429.9 308 66.2
Psat5g010960 Pisum sativum HOM05D005792 ORTHO05D007171 1.6e-118 429.9 308 66.6
Sed0026749 Sechium edule HOM05D005792 ORTHO05D007171 2.8e-118 429.1 310 66.5
Atru.chr1.2256 Acer truncatum HOM05D005792 ORTHO05D007171 4.8e-118 428.3 309 67.6
Medtr3g115040 Medicago truncatula HOM05D005792 ORTHO05D007171 4.8e-118 428.3 305 67.5
PGR083G0297 Punica granatum HOM05D005792 ORTHO05D007171 1.1e-117 427.2 305 67.5
MD08G1005200 Malus domestica HOM05D005792 ORTHO05D007171 1.4e-117 426.8 305 68.5
Sed0027939 Sechium edule HOM05D005792 ORTHO05D007171 1.4e-117 426.8 310 65.8
Nitab4.5_0000498g0200 Nicotiana tabacum HOM05D005792 ORTHO05D007171 9.0e-117 424.1 308 65.6
Ciclev10001939m.g Citrus clementina HOM05D005792 ORTHO05D007171 7.6e-116 421.0 309 67.6
Dinv39569 Davidia involucrata HOM05D005792 ORTHO05D007171 4.9e-115 418.3 308 64.3
Nitab4.5_0002353g0010 Nicotiana tabacum HOM05D005792 ORTHO05D007171 4.9e-115 418.3 306 65.0
Haze_22736 Corylus avellana HOM05D005792 ORTHO05D007171 6.5e-115 417.9 280 71.1
Hund05134 Selenicereus undatus HOM05D005792 ORTHO05D007171 5.5e-114 414.8 308 65.3
CSS0011850 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 7.1e-114 414.5 310 63.5
CSS0018708 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 7.1e-114 414.5 310 63.9
Lj4C15T2 Lonicera japonica HOM05D005792 ORTHO05D007171 3.5e-113 412.1 295 64.7
arahy.Tifrunner.gnm1.ann1.NZM2IS Arachis hypogaea HOM05D005792 ORTHO05D007171 6.0e-113 411.4 336 61.0
HanXRQChr14g0429001 Helianthus annuus HOM05D005792 ORTHO05D007171 7.9e-113 411.0 306 64.4
EL10Ac1g02028 Beta vulgaris HOM05D005792 ORTHO05D007171 1.3e-112 410.2 306 64.4
CSS0016825 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 1.8e-112 409.8 315 62.5
CAN.G401.3 Capsicum annuum HOM05D005792 ORTHO05D007171 1.8e-112 409.8 308 64.6
Lsat_1_v5_gn_2_5940 Lactuca sativa HOM05D005792 ORTHO05D007171 3.0e-112 409.1 309 64.7
Peaxi162Scf00064g00910 Petunia axillaris HOM05D005792 ORTHO05D007171 3.9e-112 408.7 306 65.4
Solyc12g094450.3 Solanum lycopersicum HOM05D005792 ORTHO05D007171 3.9e-112 408.7 308 64.0
AUR62013837 Chenopodium quinoa HOM05D005792 ORTHO05D007171 8.7e-112 407.5 302 64.6
GSVIVG01008709001 Vitis vinifera HOM05D005792 ORTHO05D007171 1.1e-111 407.1 305 63.9
Sopen12g031340 Solanum pennellii HOM05D005792 ORTHO05D007171 1.9e-111 406.4 308 63.6
ClCG08G013930 Citrullus lanatus HOM05D005792 ORTHO05D007171 5.7e-111 404.8 340 60.9
ECA238G1749 Erigeron canadensis HOM05D005792 ORTHO05D007171 5.7e-111 404.8 306 63.1
Cfa014030 Carpinus fangiana HOM05D000201 ORTHO05D004673 7.4e-111 404.4 281 70.1
Duzib116G0262 Durio zibethinus HOM05D005792 ORTHO05D007171 9.6e-111 404.1 276 68.8
Nn5g30890 Nelumbo nucifera HOM05D005792 ORTHO05D007171 9.6e-111 404.1 309 61.5
Sc26g0004560 Simmondsia chinensis HOM05D005792 ORTHO05D007171 9.6e-111 404.1 302 65.2
vmacro21840 Vaccinium macrocarpon HOM05D005792 ORTHO05D007171 2.8e-110 402.5 336 57.4
Rhsim06G0009800 Rhododendron simsii HOM05D005792 ORTHO05D007171 3.7e-110 402.1 297 63.3
Migut.C00916 Erythranthe guttata HOM05D005792 ORTHO05D007171 1.1e-109 400.6 305 62.6
Aqoxy6G01867 Aquilegia oxysepala HOM05D005792 ORTHO05D007171 2.4e-109 399.4 307 59.9
Hma1.2p1_1260F.1_g270990 Hydrangea macrophylla HOM05D005792 ORTHO05D007171 2.6e-108 396.0 308 62.0
PGSC0003DMG400029326 Solanum tuberosum HOM05D005792 ORTHO05D007171 3.4e-108 395.6 337 58.8
Cc10_g00990 Coffea canephora HOM05D005792 ORTHO05D007171 7.6e-108 394.4 316 61.4
Gohir.A05G255200 Gossypium hirsutum HOM05D005792 ORTHO05D007171 3.8e-107 392.1 310 62.9
unitig_747.g21523 Utricularia gibba HOM05D005792 ORTHO05D007171 3.8e-107 392.1 308 61.0
Os09g0544900 Oryza sativa ssp. japonica HOM05D005792 ORTHO05D007171 1.1e-106 390.6 305 62.3
PSO541G2987 Papaver somniferum HOM05D005792 ORTHO05D007171 1.4e-106 390.2 302 60.6
FAN27G1567 Fragaria x ananassa HOM05D000201 ORTHO05D004673 2.5e-103 379.4 289 66.4
Actinidia15473 Actinidia chinensis HOM05D005792 ORTHO05D007171 8.2e-102 374.4 322 57.5
FAN15G3656 Fragaria x ananassa HOM05D000201 ORTHO05D004673 8.2e-102 374.4 282 67.0
SalBow7G0964 Salvia bowleyana HOM05D005792 ORTHO05D007171 1.4e-101 373.6 292 59.6
TAR625G0413 Trochodendron aralioides HOM05D005792 ORTHO05D007171 1.3e-99 367.1 288 64.6
MBI08_g05391_MAGBIO Magnolia biondii HOM05D005792 ORTHO05D007171 6.5e-99 364.8 283 62.2
SGA_v2.0_scaffold351G49656 Striga asiatica HOM05D005792 ORTHO05D007171 7.2e-98 361.3 311 58.8
DCAR_016749 Daucus carota HOM05D005792 ORTHO05D007171 2.0e-95 353.2 365 49.9
SHI08027 Sapria himalayana HOM05D005792 ORTHO05D007171 2.0e-92 343.2 286 59.1
Pp3c4_24330 Physcomitrium patens HOM05D005792 ORTHO05D007171 6.1e-89 331.6 313 55.0
Haze_22722 Corylus avellana HOM05D005792 ORTHO05D007171 8.8e-88 327.8 272 61.0
Ah.11g040640 Amaranthus hybridus HOM05D005792 ORTHO05D007171 2.0e-87 326.6 306 54.9
COL.COLO4_26053 Corchorus olitorius HOM05D005792 ORTHO05D007171 3.3e-87 325.9 313 55.9
DCAR_013899 Daucus carota HOM05D005792 ORTHO05D007171 7.7e-84 314.7 305 53.1
Nitab4.5_0000588g0300 Nicotiana tabacum HOM05D005792 ORTHO05D007171 2.2e-83 313.2 308 53.6
PSO675G2870 Papaver somniferum HOM05D005792 ORTHO05D007171 8.5e-83 311.2 302 52.6
Zm00001eb104070 Zea mays HOM05D005792 ORTHO05D007171 2.1e-81 306.6 237 63.3
Gohir.D02G118150 Gossypium hirsutum HOM05D005792 ORTHO05D007171 3.3e-79 299.3 251 60.2
SMO174G0111 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 2.8e-78 296.2 300 50.0
Phvul.009G020900 Phaseolus vulgaris HOM05D005792 ORTHO05D007171 1.4e-77 293.9 221 65.2
AUR62036768 Chenopodium quinoa HOM05D005792 ORTHO05D007171 1.2e-76 290.8 283 54.1
Mapoly0135s0031 Marchantia polymorpha HOM05D005792 ORTHO05D007171 6.3e-70 268.5 311 45.7
arahy.Tifrunner.gnm1.ann1.CIDL5D Arachis hypogaea HOM05D005792 ORTHO05D007171 7.2e-66 255.0 182 65.9
Oeu021471.1 Olea europaea HOM05D005792 ORTHO05D007171 2.0e-63 246.9 182 62.6
Zm00001eb321160 Zea mays HOM05D005792 ORTHO05D007171 6.3e-62 241.9 215 55.8
ATR0661G150 Amborella trichopoda HOM05D005792 ORTHO05D007171 8.3e-62 241.5 192 64.1
MSTRG.25290 Avicennia marina HOM05D005792 ORTHO05D007171 5.4e-61 238.8 183 58.5
TAR625G0324 Trochodendron aralioides HOM05D005792 ORTHO05D007171 2.7e-60 236.5 167 69.5
SEGI_22358 Sequoiadendron giganteum HOM05D005792 ORTHO05D007171 1.7e-59 233.8 198 58.6
Sabra02G0010800 Salix brachista HOM05D005792 ORTHO05D007171 1.3e-54 217.6 235 51.9
CBR_g50912 Chara braunii HOM05D005792 ORTHO05D007171 2.7e-52 209.9 397 35.0
TPR.G38109 Trifolium pratense HOM05D005792 ORTHO05D007171 2.0e-47 193.7 295 38.0
AagrBONN_evm.TU.Sc2ySwM_117.3246 Anthoceros agrestis HOM05D005792 ORTHO05D007171 2.6e-47 193.4 206 51.0
CDE05G1591 Ceratophyllum demersum HOM05D005792 ORTHO05D007171 9.8e-47 191.4 157 56.1
TPR.G753 Trifolium pratense HOM05D005792 ORTHO05D007171 3.7e-46 189.5 126 72.2
Actinidia17028 Actinidia chinensis HOM05D005792 ORTHO05D007171 7.3e-42 175.3 161 52.8
CSS0030340 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 2.6e-39 166.8 131 61.8
Haze_26844 Corylus avellana HOM05D005792 ORTHO05D007171 2.1e-36 157.1 284 36.3
TAR625G0970 Trochodendron aralioides HOM05D005792 ORTHO05D007171 3.6e-33 146.4 103 64.1
Hund05135 Selenicereus undatus HOM05D005792 ORTHO05D007171 2.9e-30 136.7 267 33.0
Cre06.g308100 Chlamydomonas reinhardtii HOM05D005792 ORTHO05D007171 3.8e-30 136.3 279 31.5
HPP92_014386 Vanilla planifolia HOM05D005792 ORTHO05D007171 3.5e-28 129.8 101 59.4
SalBow6G2635 Salvia bowleyana HOM05D005792 ORTHO05D007171 4.0e-24 116.3 83 62.7
CBR_g22029 Chara braunii HOM05D005792 ORTHO05D007171 8.4e-22 108.6 135 44.4
SMO174G0016 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 2.4e-16 90.5 82 54.9
COL.COLO4_12452 Corchorus olitorius HOM05D005792 ORTHO05D007171 6.0e-12 75.9 74 54.1
SMO174G0053 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 2.3e-11 73.9 77 48.1
Sabra02G0010700 Salix brachista HOM05D000201 ORTHO05D000490 3.0e-11 73.6 59 57.6
Mapoly0033s0029 Marchantia polymorpha HOM05D005792 ORTHO05D007171 3.3e-10 70.1 144 34.0
ATR0661G053 Amborella trichopoda HOM05D005792 ORTHO05D007171 5.6e-10 69.3 57 61.4
Cpa.g.sc26.236 Carica papaya HOM05D005792 ORTHO05D007171 4.8e-09 66.2 36 83.3
SEGI_02138 Sequoiadendron giganteum HOM05D005792 ORTHO05D007171 1.2e-07 61.6 56 50.0


User provided reference genes

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