Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p49760 Brassica napus HOM05D006069 ORTHO05D008101 4.5e-62 241.1 124 100.0
BcaC08g47325 Brassica carinata HOM05D006069 ORTHO05D008101 6.5e-53 210.7 122 88.5
BolC6t40015H Brassica oleracea HOM05D006069 ORTHO05D008101 6.5e-53 210.7 122 88.5
Thhalv10019558m.g Eutrema salsugineum HOM05D006069 ORTHO05D008101 1.3e-48 196.4 120 80.0
BcaC08g47066 Brassica carinata HOM05D006069 ORTHO05D008101 4.8e-48 194.5 115 88.7
Sp5g30930 Schrenkiella parvula HOM05D006069 ORTHO05D008101 1.1e-47 193.4 120 80.0
BraA02t07058Z Brassica rapa HOM05D006069 ORTHO05D008101 5.3e-47 191.0 122 80.3
BcaC03g15627 Brassica carinata HOM05D006069 ORTHO05D008101 6.9e-47 190.7 122 79.5
C02p33660 Brassica napus HOM05D006069 ORTHO05D008101 6.9e-47 190.7 122 79.5
BolC2t09338H Brassica oleracea HOM05D006069 ORTHO05D008101 6.9e-47 190.7 122 79.5
BcaB05g24944 Brassica carinata HOM05D006069 ORTHO05D008101 7.7e-46 187.2 125 77.6
A02p20240 Brassica napus HOM05D006069 ORTHO05D008101 1.0e-45 186.8 122 79.5
AL2G35800 Arabidopsis lyrata HOM05D006069 ORTHO05D008101 8.5e-45 183.7 122 77.0
AT1G75810 Arabidopsis thaliana HOM05D006069 ORTHO05D008101 2.5e-44 182.2 122 76.2
BcaC08g47069 Brassica carinata HOM05D006069 ORTHO05D008101 2.5e-44 182.2 120 75.0
Aa31LG4G6010 Aethionema arabicum HOM05D006069 ORTHO05D008101 4.2e-44 181.4 120 76.7
CARHR069230 Cardamine hirsuta HOM05D006069 ORTHO05D008101 5.7e-41 171.0 120 73.3
Carub.0002s2266 Capsella rubella HOM05D006069 ORTHO05D008101 1.8e-39 166.0 123 72.4
THA.LOC104811416 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 1.4e-31 139.8 121 59.5
COL.COLO4_26120 Corchorus olitorius HOM05D006069 ORTHO05D008101 3.8e-29 131.7 119 58.0
Thecc.08G047500 Theobroma cacao HOM05D006069 ORTHO05D008101 4.2e-28 128.3 119 57.1
Duzib041G0459 Durio zibethinus HOM05D006069 ORTHO05D008101 1.6e-27 126.3 119 57.1
Ciclev10002907m.g Citrus clementina HOM05D006069 ORTHO05D008101 4.7e-27 124.8 119 57.1
Haze_22649 Corylus avellana HOM05D006069 ORTHO05D008101 6.1e-27 124.4 123 56.1
Potri.005G241200 Populus trichocarpa HOM05D006069 ORTHO05D008101 1.8e-26 122.9 114 57.0
Atru.chr13.270 Acer truncatum HOM05D006069 ORTHO05D008101 2.3e-26 122.5 120 56.7
Cfa013967 Carpinus fangiana HOM05D006069 ORTHO05D008101 3.0e-26 122.1 118 57.6
Duzib093G2212 Durio zibethinus HOM05D006069 ORTHO05D008101 3.0e-26 122.1 119 55.5
Haze_22650 Corylus avellana HOM05D003905 ORTHO05D005329 8.8e-26 120.6 118 56.8
Cfa013969 Carpinus fangiana HOM05D006069 ORTHO05D008101 1.5e-25 119.8 121 55.4
Sabra02G0016400 Salix brachista HOM05D006069 ORTHO05D008101 1.5e-25 119.8 114 57.0
Gohir.D05G258200 Gossypium hirsutum HOM05D006069 ORTHO05D008101 2.6e-25 119.0 117 55.6
Gorai.009G269500 Gossypium raimondii HOM05D006069 ORTHO05D008101 2.6e-25 119.0 117 55.6
Sabra05G0186700 Salix brachista HOM05D006069 ORTHO05D008101 3.3e-25 118.6 114 55.3
Gohir.A05G256400 Gossypium hirsutum HOM05D006069 ORTHO05D008101 7.5e-25 117.5 117 54.7
QL02p011928 Quercus lobata HOM05D006069 ORTHO05D008101 9.7e-25 117.1 118 54.2
QL11p034297 Quercus lobata HOM05D006069 ORTHO05D008101 9.7e-25 117.1 118 54.2
A07p41340 Brassica napus HOM05D006069 ORTHO05D032697 1.3e-24 116.7 73 89.0
Manes.18G012400 Manihot esculenta HOM05D006069 ORTHO05D008101 1.3e-24 116.7 114 55.3
Cpa.g.sc64.165 Carica papaya HOM05D006069 ORTHO05D008101 1.7e-24 116.3 119 52.1
Lalb_Chr01g0008621 Lupinus albus HOM05D006069 ORTHO05D008101 1.7e-24 116.3 117 49.6
Cpa.g.c46170 Carica papaya HOM05D006069 ORTHO05D008101 2.2e-24 115.9 118 52.5
TWI56G0900 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 4.8e-24 114.8 118 52.5
arahy.Tifrunner.gnm1.ann1.LEZM1J Arachis hypogaea HOM05D006069 ORTHO05D008101 8.2e-24 114.0 121 49.6
TWI12G0868 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 8.2e-24 114.0 118 52.5
Eucgr.H00971 Eucalyptus grandis HOM05D006069 ORTHO05D008101 1.1e-23 113.6 112 55.4
Lalb_Chr19g0131451 Lupinus albus HOM05D006069 ORTHO05D008101 1.8e-23 112.8 117 50.4
MD08G1011100 Malus domestica HOM05D006069 ORTHO05D008101 1.8e-23 112.8 118 50.8
Potri.002G020200 Populus trichocarpa HOM05D006069 ORTHO05D008101 2.4e-23 112.5 113 54.0
RcHm_v2.0_Chr6g0303091 Rosa chinensis HOM05D006069 ORTHO05D008101 3.1e-23 112.1 120 52.5
CiPaw.07G148400 Carya illinoinensis HOM05D006069 ORTHO05D008101 4.1e-23 111.7 118 50.8
Medtr3g113620 Medicago truncatula HOM05D006069 ORTHO05D008101 7.0e-23 110.9 115 49.6
Phvul.001G005300 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 7.0e-23 110.9 117 49.6
Prupe.1G363800 Prunus persica HOM05D006069 ORTHO05D008101 7.0e-23 110.9 122 49.2
VMungo0647G0980 Vigna mungo HOM05D006069 ORTHO05D008101 9.1e-23 110.5 117 49.6
EL10Ac1g02174 Beta vulgaris HOM05D006069 ORTHO05D008101 1.2e-22 110.2 119 48.7
Oeu061972.1 Olea europaea HOM05D006069 ORTHO05D008101 1.2e-22 110.2 113 48.7
Nitab4.5_0000934g0080 Nicotiana tabacum HOM05D006069 ORTHO05D008101 1.6e-22 109.8 121 47.1
Gohir.A06G002300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 2.7e-22 109.0 124 49.2
Lalb_Chr03g0033431 Lupinus albus HOM05D006069 ORTHO05D008101 2.7e-22 109.0 117 47.9
Nn6g32021 Nelumbo nucifera HOM05D006069 ORTHO05D008101 3.5e-22 108.6 118 50.8
Psat0s2878g0120 Pisum sativum HOM05D006069 ORTHO05D008101 3.5e-22 108.6 115 51.3
Glyma.14G219800 Glycine max HOM05D006069 ORTHO05D008101 4.5e-22 108.2 117 48.7
Actinidia16995 Actinidia chinensis HOM05D006069 ORTHO05D006669 7.7e-22 107.5 113 47.8
Oeu014170.1 Olea europaea HOM05D006069 ORTHO05D008101 7.7e-22 107.5 113 49.6
Solyc04g078060.1 Solanum lycopersicum HOM05D006069 ORTHO05D008101 7.7e-22 107.5 115 47.8
Duzib116G0547 Durio zibethinus HOM05D006069 ORTHO05D008101 1.0e-21 107.1 106 57.5
Gohir.D06G005300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 1.0e-21 107.1 124 47.6
Gorai.010G002500 Gossypium raimondii HOM05D006069 ORTHO05D008101 1.0e-21 107.1 124 47.6
Hma1.2p1_0733F.1_g210300 Hydrangea macrophylla HOM05D006069 ORTHO05D008101 1.0e-21 107.1 113 49.6
TAR625G1525 Trochodendron aralioides HOM05D006069 ORTHO05D008101 1.3e-21 106.7 118 50.0
FvH4_2g38290 Fragaria vesca HOM05D006069 ORTHO05D008101 1.7e-21 106.3 120 50.8
Manes.05G145900 Manihot esculenta HOM05D006069 ORTHO05D008101 1.7e-21 106.3 118 53.4
Actinidia15431 Actinidia chinensis HOM05D006069 ORTHO05D008101 2.2e-21 105.9 117 50.4
Sc02g0008640 Simmondsia chinensis HOM05D006069 ORTHO05D008101 2.9e-21 105.5 118 47.5
Ca_00837_v3 Cicer arietinum L. HOM05D006069 ORTHO05D008101 3.8e-21 105.1 120 47.5
FAN15G3329 Fragaria x ananassa HOM05D006069 ORTHO05D008101 3.8e-21 105.1 120 50.0
PGSC0003DMG400021511 Solanum tuberosum HOM05D006069 ORTHO05D008101 3.8e-21 105.1 115 47.0
AUR62041483 Chenopodium quinoa HOM05D006069 ORTHO05D008101 5.0e-21 104.8 114 49.1
unitig_82.g27107 Utricularia gibba HOM05D006069 ORTHO05D008101 5.0e-21 104.8 114 48.2
Migut.N03168 Erythranthe guttata HOM05D006069 ORTHO05D008101 8.5e-21 104.0 114 45.6
Sopen04g031650 Solanum pennellii HOM05D006069 ORTHO05D008101 8.5e-21 104.0 115 47.0
SalBow8G0098 Salvia bowleyana HOM05D006069 ORTHO05D008101 1.9e-20 102.8 114 46.5
Sopen12g030410 Solanum pennellii HOM05D006069 ORTHO05D008101 1.9e-20 102.8 114 42.1
FAN27G3260 Fragaria x ananassa HOM05D006069 ORTHO05D008101 2.5e-20 102.4 120 49.2
CSS0019530 Camellia sinensis var. sinensis HOM05D006069 ORTHO05D008101 7.2e-20 100.9 113 48.7
PGR031G1000 Punica granatum HOM05D006069 ORTHO05D008101 9.4e-20 100.5 112 49.1
SGA_v2.0_scaffold11G05937 Striga asiatica HOM05D006069 ORTHO05D008101 9.4e-20 100.5 114 44.7
SalBow7G4587 Salvia bowleyana HOM05D006069 ORTHO05D008101 1.2e-19 100.1 117 44.4
Dinv31861 Davidia involucrata HOM05D006069 ORTHO05D000038 1.6e-19 99.8 118 47.5
Lsat_1_v5_gn_8_29900 Lactuca sativa HOM05D006069 ORTHO05D008101 1.6e-19 99.8 120 45.8
Glyma.06G023700 Glycine max HOM05D006069 ORTHO05D008101 2.7e-19 99.0 115 47.0
Lalb_Chr23g0266111 Lupinus albus HOM05D006069 ORTHO05D008101 2.7e-19 99.0 115 47.8
SGA_v2.0_scaffold47G17498 Striga asiatica HOM05D006069 ORTHO05D008101 2.7e-19 99.0 113 48.7
CANSAT25G1864 Cannabis sativa HOM05D006069 ORTHO05D008101 3.6e-19 98.6 115 47.0
MD15G1011100 Malus domestica HOM05D006069 ORTHO05D008101 3.6e-19 98.6 121 46.3
Nitab4.5_0000569g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 3.6e-19 98.6 114 46.5
VMungo1309G1320 Vigna mungo HOM05D006069 ORTHO05D008101 3.6e-19 98.6 115 46.1
Oeu054481.1 Olea europaea HOM05D006069 ORTHO05D008101 4.7e-19 98.2 114 47.4
Ah.00g000260 Amaranthus hybridus HOM05D006069 ORTHO05D008101 6.1e-19 97.8 114 44.7
THA.LOC104805018 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 6.1e-19 97.8 119 47.1
DCAR_013877 Daucus carota HOM05D006069 ORTHO05D000038 8.0e-19 97.4 111 46.8
Nitab4.5_0007809g0010 Nicotiana tabacum HOM05D006069 ORTHO05D008101 3.0e-18 95.5 114 45.6
Peaxi162Scf00081g00135 Petunia axillaris HOM05D002628 ORTHO05D008101 6.8e-18 94.4 107 45.8
Sc15g0004900 Simmondsia chinensis HOM05D006069 ORTHO05D008101 6.8e-18 94.4 113 45.1
arahy.Tifrunner.gnm1.ann1.Q2AYB8 Arachis hypogaea HOM05D006069 ORTHO05D008101 8.8e-18 94.0 120 45.0
Glyma.17G258800 Glycine max HOM05D006069 ORTHO05D008101 8.8e-18 94.0 107 46.7
HanXRQChr13g0387231 Helianthus annuus HOM05D006069 ORTHO05D008101 8.8e-18 94.0 113 46.9
PGSC0003DMG400011549 Solanum tuberosum HOM05D006069 ORTHO05D008101 8.8e-18 94.0 116 41.4
DCAR_016725 Daucus carota HOM05D006069 ORTHO05D008101 1.2e-17 93.6 111 45.0
Lsat_1_v5_gn_0_33081 Lactuca sativa HOM05D006069 ORTHO05D008101 4.4e-17 91.7 116 41.4
PSO170G3064 Papaver somniferum HOM05D006069 ORTHO05D008101 1.7e-16 89.7 114 44.7
Rhsim06G0020100 Rhododendron simsii HOM05D006069 ORTHO05D008101 1.7e-16 89.7 102 47.1
Lalb_Chr11g0061821 Lupinus albus HOM05D006069 ORTHO05D008101 2.2e-16 89.4 115 42.6
unitig_747.g21531 Utricularia gibba HOM05D006069 ORTHO05D008101 2.2e-16 89.4 113 41.6
ECA233G2757 Erigeron canadensis HOM05D006069 ORTHO05D008101 3.7e-16 88.6 104 43.3
arahy.Tifrunner.gnm1.ann1.KJD857 Arachis hypogaea HOM05D006069 ORTHO05D008101 6.3e-16 87.8 115 45.2
Aqoxy5G01811 Aquilegia oxysepala HOM05D006069 ORTHO05D008101 1.1e-15 87.0 113 41.6
Phvul.009G017800 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 7.0e-15 84.3 106 44.3
PSO700G0183 Papaver somniferum HOM05D006069 ORTHO05D008101 1.2e-14 83.6 117 40.2
Psat6g002280 Pisum sativum HOM05D006069 ORTHO05D008101 2.0e-14 82.8 117 35.9
Medtr1g025490 Medicago truncatula HOM05D006069 ORTHO05D008101 3.5e-14 82.0 117 38.5
Nitab4.5_0003228g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 3.5e-14 82.0 107 42.1
Migut.C00852 Erythranthe guttata HOM05D006069 ORTHO05D008101 1.0e-13 80.5 106 42.5
Peaxi162Scf00160g00114 Petunia axillaris HOM05D006069 ORTHO05D008101 2.5e-12 75.9 112 42.0
AUR62040543 Chenopodium quinoa HOM05D006069 ORTHO05D009490 1.4e-07 60.1 62 51.6
Dinv26438 Davidia involucrata HOM05D006069 ORTHO05D008101 1.8e-07 59.7 62 50.0


User provided reference genes

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