Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p49630 Brassica napus HOM05D007166 ORTHO05D009039 8.7e-80 300.4 174 100.0
A07p41210 Brassica napus HOM05D007166 ORTHO05D009039 5.5e-66 254.6 168 92.9
BraA07t31656Z Brassica rapa HOM05D007166 ORTHO05D009039 6.1e-65 251.1 152 98.0
BolC6t40002H Brassica oleracea HOM05D007166 ORTHO05D009039 3.0e-64 248.8 152 97.4
BcaC08g47053 Brassica carinata HOM05D007166 ORTHO05D009039 1.9e-63 246.1 152 96.7
Thhalv10019268m.g Eutrema salsugineum HOM05D007166 ORTHO05D009039 6.5e-59 231.1 152 92.1
Sp5g30800 Schrenkiella parvula HOM05D007166 ORTHO05D009039 2.1e-57 226.1 152 91.4
Carub.0002s2253 Capsella rubella HOM05D007166 ORTHO05D009039 2.3e-56 222.6 152 88.8
CARHR069090 Cardamine hirsuta HOM05D007166 ORTHO05D009039 1.1e-55 220.3 152 88.8
AT1G75690 Arabidopsis thaliana HOM05D007166 ORTHO05D009039 3.3e-55 218.8 152 89.5
BraA02t07050Z Brassica rapa HOM05D007166 ORTHO05D009039 9.1e-53 210.7 157 84.7
A02p20150 Brassica napus HOM05D007166 ORTHO05D009039 1.2e-52 210.3 157 84.7
Aa31LG4G5920 Aethionema arabicum HOM05D007166 ORTHO05D009039 2.0e-52 209.5 153 85.6
C02p33780 Brassica napus HOM05D007166 ORTHO05D009039 2.6e-52 209.1 164 82.3
AL2G35670 Arabidopsis lyrata HOM05D007166 ORTHO05D009039 7.7e-52 207.6 153 86.3
THA.LOC104813791 Tarenaya hassleriana HOM05D007166 ORTHO05D009039 8.5e-51 204.1 157 82.2
BolC2t09326H Brassica oleracea HOM05D007166 ORTHO05D009039 1.4e-50 203.4 153 85.0
BcaC03g15610 Brassica carinata HOM05D007166 ORTHO05D009039 7.2e-50 201.1 152 84.9
ClCG05G018350 Citrullus lanatus HOM05D007166 ORTHO05D009039 2.7e-41 172.6 146 73.3
CsaV3_3G045770 Cucumis sativus L. HOM05D007166 ORTHO05D009039 1.0e-40 170.6 150 72.0
TWI56G1425 Tripterygium wilfordii HOM05D007166 ORTHO05D009039 2.3e-40 169.5 150 74.0
MELO3C003759.2 Cucumis melo HOM05D007166 ORTHO05D009039 5.2e-40 168.3 150 72.0
PGR031G2037 Punica granatum HOM05D007166 ORTHO05D009039 6.7e-40 167.9 154 68.8
Sed0018016 Sechium edule HOM05D007166 ORTHO05D009039 1.2e-39 167.2 156 69.2
CAN.G311.15 Capsicum annuum HOM05D007166 ORTHO05D009039 3.3e-39 165.6 151 70.9
Peaxi162Scf00438g00619 Petunia axillaris HOM05D007166 ORTHO05D009039 9.7e-39 164.1 151 68.9
Cc10_g01790 Coffea canephora HOM05D007166 ORTHO05D009039 1.3e-38 163.7 152 71.1
Dinv31833 Davidia involucrata HOM05D007166 ORTHO05D009039 1.3e-38 163.7 152 71.1
VMungo0647G2551 Vigna mungo HOM05D007166 ORTHO05D009039 1.7e-38 163.3 143 72.7
Glyma.14G218200 Glycine max HOM05D007166 ORTHO05D009039 2.2e-38 162.9 154 70.8
TAR628G0810 Trochodendron aralioides HOM05D007166 ORTHO05D009039 2.2e-38 162.9 163 67.5
Lj4A797T62 Lonicera japonica HOM05D007166 ORTHO05D009039 2.8e-38 162.5 156 67.9
FvH4_2g38630 Fragaria vesca HOM05D007166 ORTHO05D009039 3.7e-38 162.2 152 69.7
Glyma.17G257400 Glycine max HOM05D007166 ORTHO05D009039 3.7e-38 162.2 155 69.7
CiPaw.08G065500 Carya illinoinensis HOM05D007166 ORTHO05D009039 4.8e-38 161.8 151 70.9
HanXRQChr05g0146521 Helianthus annuus HOM05D007166 ORTHO05D009039 4.8e-38 161.8 146 69.2
Phvul.001G007500 Phaseolus vulgaris HOM05D007166 ORTHO05D009039 4.8e-38 161.8 149 72.5
GSVIVG01009888001 Vitis vinifera HOM05D007166 ORTHO05D009039 6.3e-38 161.4 151 71.5
Duzib116G0210 Durio zibethinus HOM05D007166 ORTHO05D009039 1.1e-37 160.6 152 69.7
Atru.chr13.311 Acer truncatum HOM05D007166 ORTHO05D009039 1.4e-37 160.2 156 66.7
Lalb_Chr22g0354371 Lupinus albus HOM05D007166 ORTHO05D009039 1.8e-37 159.8 143 70.6
Potri.002G023600 Populus trichocarpa HOM05D007166 ORTHO05D009039 1.8e-37 159.8 154 70.1
CSS0019896 Camellia sinensis var. sinensis HOM05D007166 ORTHO05D009039 2.4e-37 159.5 151 72.2
MD08G1014000 Malus domestica HOM05D007166 ORTHO05D009039 2.4e-37 159.5 153 71.9
MSTRG.1201 Avicennia marina HOM05D007166 ORTHO05D009039 3.1e-37 159.1 152 67.1
Nn5g29333 Nelumbo nucifera HOM05D007166 ORTHO05D009039 3.1e-37 159.1 149 69.1
Sabra02G0019200 Salix brachista HOM05D007166 ORTHO05D009039 3.1e-37 159.1 154 68.8
Haze_22621 Corylus avellana HOM05D007166 ORTHO05D009039 4.1e-37 158.7 152 69.7
MD15G1013500 Malus domestica HOM05D007166 ORTHO05D009039 4.1e-37 158.7 153 69.3
QL02p011380 Quercus lobata HOM05D007166 ORTHO05D009039 4.1e-37 158.7 150 68.7
Solyc04g081320.4 Solanum lycopersicum HOM05D007166 ORTHO05D009039 5.3e-37 158.3 152 69.7
Medtr1g024840 Medicago truncatula HOM05D007166 ORTHO05D009039 9.1e-37 157.5 145 70.3
Thecc.08G042800 Theobroma cacao HOM05D007166 ORTHO05D009039 9.1e-37 157.5 144 68.1
Eucgr.F00601 Eucalyptus grandis HOM05D007166 ORTHO05D009039 1.2e-36 157.1 150 66.7
Sopen04g034940 Solanum pennellii HOM05D007166 ORTHO05D009039 1.2e-36 157.1 152 69.1
CANSAT25G3739 Cannabis sativa HOM05D007166 ORTHO05D009039 1.6e-36 156.8 157 66.9
Gorai.010G005000 Gossypium raimondii HOM05D007166 ORTHO05D009039 2.7e-36 156.0 149 67.1
SGA_v2.0_scaffold92G28245 Striga asiatica HOM05D007166 ORTHO05D009039 2.7e-36 156.0 156 66.0
Actinidia15414 Actinidia chinensis HOM05D007166 ORTHO05D009039 4.5e-36 155.2 148 66.2
Gohir.D06G000600 Gossypium hirsutum HOM05D007166 ORTHO05D009039 4.5e-36 155.2 149 67.1
Gohir.A06G004800 Gossypium hirsutum HOM05D007166 ORTHO05D009039 5.9e-36 154.8 149 67.1
Prupe.1G367000 Prunus persica HOM05D007166 ORTHO05D009039 7.7e-36 154.5 153 69.9
arahy.Tifrunner.gnm1.ann1.74SAHL Arachis hypogaea HOM05D007166 ORTHO05D009039 2.9e-35 152.5 148 68.2
BcaB05g24933 Brassica carinata HOM05D007166 ORTHO05D009039 2.9e-35 152.5 148 62.8
Duzib093G1587 Durio zibethinus HOM05D007166 ORTHO05D009039 3.8e-35 152.1 149 65.8
Potri.005G237800 Populus trichocarpa HOM05D007166 ORTHO05D009039 3.8e-35 152.1 155 67.1
Lsat_1_v5_gn_9_46261 Lactuca sativa HOM05D007166 ORTHO05D009039 6.5e-35 151.4 155 68.4
Oeu007334.1 Olea europaea HOM05D007166 ORTHO05D009039 6.5e-35 151.4 152 64.5
COL.COLO4_26159 Corchorus olitorius HOM05D007166 ORTHO05D009039 8.5e-35 151.0 154 64.9
Migut.C00807 Erythranthe guttata HOM05D007166 ORTHO05D009039 8.5e-35 151.0 149 67.8
RcHm_v2.0_Chr6g0302691 Rosa chinensis HOM05D007166 ORTHO05D009039 1.5e-34 150.2 149 67.1
Rhsim06G0022200 Rhododendron simsii HOM05D007166 ORTHO05D009039 2.5e-34 149.4 149 66.4
unitig_46.g17964 Utricularia gibba HOM05D007166 ORTHO05D009039 2.5e-34 149.4 154 64.9
FAN20G1945 Fragaria x ananassa HOM05D007166 ORTHO05D009039 4.2e-34 148.7 160 65.0
TPR.G34359 Trifolium pratense HOM05D007166 ORTHO05D009039 4.2e-34 148.7 136 69.9
ECA232G5036 Erigeron canadensis HOM05D007166 ORTHO05D009039 5.5e-34 148.3 159 63.5
DCAR_017474 Daucus carota HOM05D007166 ORTHO05D009039 1.6e-33 146.7 157 65.6
PSO170G1901 Papaver somniferum HOM05D007166 ORTHO05D009039 2.7e-33 146.0 143 68.5
Manes.18G014600 Manihot esculenta HOM05D007166 ORTHO05D009039 4.7e-33 145.2 129 61.2
Os03g0244000 Oryza sativa ssp. japonica HOM05D007166 ORTHO05D009039 8.0e-33 144.4 151 66.2
PSO700G0103 Papaver somniferum HOM05D007166 ORTHO05D009039 1.0e-32 144.1 143 66.4
HPP92_015209 Vanilla planifolia HOM05D007166 ORTHO05D009039 1.0e-32 144.1 143 67.8
PGSC0003DMG400003776 Solanum tuberosum HOM05D007166 ORTHO05D009039 1.2e-31 140.6 185 45.4
FAN15G1492 Fragaria x ananassa HOM05D007166 ORTHO05D009039 2.0e-31 139.8 188 56.4
Lj5g0017261 Lotus japonicus HOM05D007166 ORTHO05D009039 2.0e-31 139.8 182 57.1
EL10Ac5g11627 Beta vulgaris HOM05D007166 ORTHO05D009039 4.8e-30 135.2 147 65.3
CDE02G4515 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 4.8e-30 135.2 111 75.7
Zm00001eb081060 Zea mays HOM05D007166 ORTHO05D009039 8.3e-30 134.4 153 63.4
AagrBONN_evm.TU.Sc2ySwM_369.321 Anthoceros agrestis HOM05D007166 ORTHO05D009039 4.1e-29 132.1 104 74.0
Mapoly0005s0157 Marchantia polymorpha HOM05D007166 ORTHO05D009039 9.1e-29 131.0 116 69.0
Pp3s104_40 Physcomitrium patens HOM05D007166 ORTHO05D009039 1.6e-28 130.2 104 74.0
Pp3c22_16100 Physcomitrium patens HOM05D007166 ORTHO05D009039 2.7e-28 129.4 123 65.9
SMO165G0060 Selaginella moellendorffii HOM05D007166 ORTHO05D009039 3.6e-25 119.0 104 69.2
AUR62036485 Chenopodium quinoa HOM05D007166 ORTHO05D009039 1.8e-24 116.7 145 62.8
Ciclev10002412m.g Citrus clementina HOM05D007166 ORTHO05D009039 3.0e-24 115.9 160 43.8
Cfa013938 Carpinus fangiana HOM05D007166 ORTHO05D009039 2.0e-23 113.2 188 41.0
CDE02G3586 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 2.0e-23 113.2 68 75.0
Cpa.g.sc1059.4 Carica papaya HOM05D007166 ORTHO05D009039 4.4e-23 112.1 100 64.0
Nitab4.5_0001540g0050 Nicotiana tabacum HOM05D007166 ORTHO05D009039 1.3e-22 110.5 151 46.4
AUR62037091 Chenopodium quinoa HOM05D007166 ORTHO05D009039 5.4e-21 105.1 118 57.6
CBR_g44435 Chara braunii HOM05D007166 ORTHO05D009039 9.2e-21 104.4 150 52.7
HPP92_015221 Vanilla planifolia HOM05D007166 ORTHO05D009039 7.3e-18 94.7 90 58.9
Aqoxy5G01769 Aquilegia oxysepala HOM05D007166 ORTHO05D009039 2.4e-13 79.7 93 49.5
arahy.Tifrunner.gnm1.ann1.MS74EG Arachis hypogaea HOM05D007166 ORTHO05D009039 1.3e-11 73.9 144 37.5
Hund05201 Selenicereus undatus HOM05D007166 ORTHO05D009039 1.3e-11 73.9 59 64.4
Thecc.09G255600 Theobroma cacao HOM05D007166 ORTHO05D009039 4.7e-09 65.5 102 45.1
MBI09_g08444_MAGBIO Magnolia biondii HOM05D007166 ORTHO05D009039 2.3e-08 63.2 96 38.5
ATR0912G003 Amborella trichopoda HOM05D007166 ORTHO05D009039 7.5e-07 58.2 53 50.9


User provided reference genes

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