Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p49130 Brassica napus HOM05D002134 ORTHO05D008658 0.0e+00 1285.4 853 100.0
BolC6t39947H Brassica oleracea HOM05D002134 ORTHO05D008658 0.0e+00 1285.4 853 100.0
BcaC08g46941 Brassica carinata HOM05D000061 ORTHO05D008658 0.0e+00 1182.2 844 89.7
A07p40750 Brassica napus HOM05D002134 ORTHO05D008658 0.0e+00 1104.4 859 86.1
BraA07t31617Z Brassica rapa HOM05D002134 ORTHO05D008658 0.0e+00 1087.8 848 84.8
BcaC08g46976 Brassica carinata HOM05D002134 ORTHO05D008658 2.4e-284 982.2 873 80.5
Sp5g30280 Schrenkiella parvula HOM05D002134 ORTHO05D008658 2.8e-256 889.0 869 70.0
CARHR068480 Cardamine hirsuta HOM05D002134 ORTHO05D008658 1.5e-228 797.0 876 62.7
AL2G35050 Arabidopsis lyrata HOM05D002134 ORTHO05D008658 1.8e-223 780.0 862 64.4
Carub.0002s2196 Capsella rubella HOM05D002134 ORTHO05D008658 2.0e-222 776.5 865 64.0
AT1G75150 Arabidopsis thaliana HOM05D002134 ORTHO05D008658 1.4e-218 763.8 890 60.9
Thhalv10019843m.g Eutrema salsugineum HOM05D002134 ORTHO05D008658 1.6e-211 740.3 830 62.4
Aa31LG4G5340 Aethionema arabicum HOM05D002134 ORTHO05D008658 1.2e-179 634.4 894 56.6
THA.LOC104813840 Tarenaya hassleriana HOM05D002134 ORTHO05D008658 8.5e-136 488.8 857 55.8
Haze_17986 Corylus avellana HOM05D002134 ORTHO05D008658 1.9e-71 275.0 670 39.1
TWI12G0094 Tripterygium wilfordii HOM05D002134 ORTHO05D008658 2.5e-71 274.6 636 41.2
Cfa018138 Carpinus fangiana HOM05D002134 ORTHO05D008658 8.1e-70 269.6 644 37.7
Duzib116G0898 Durio zibethinus HOM05D002134 ORTHO05D008658 8.1e-70 269.6 651 41.0
Dinv36064 Davidia involucrata HOM05D002134 ORTHO05D008658 5.8e-68 263.5 641 39.5
Gohir.A01G116400 Gossypium hirsutum HOM05D002134 ORTHO05D008658 9.9e-68 262.7 635 40.9
CiPaw.15G075800 Carya illinoinensis HOM05D002134 ORTHO05D008658 1.3e-67 262.3 648 38.1
Manes.05G161600 Manihot esculenta HOM05D002134 ORTHO05D008658 2.9e-67 261.2 631 37.9
Eucgr.F01907 Eucalyptus grandis HOM05D002134 ORTHO05D008658 6.4e-67 260.0 649 37.0
Gohir.D01G104800 Gossypium hirsutum HOM05D002134 ORTHO05D008658 6.4e-67 260.0 632 41.5
Thecc.08G024500 Theobroma cacao HOM05D002134 ORTHO05D008658 1.9e-66 258.5 599 40.7
Potri.002G262800 Populus trichocarpa HOM05D002134 ORTHO05D008658 4.1e-66 257.3 603 39.8
QL02p007944 Quercus lobata HOM05D002134 ORTHO05D008658 1.6e-65 255.4 633 39.0
Gorai.002G128800 Gossypium raimondii HOM05D002134 ORTHO05D008658 2.7e-65 254.6 634 40.5
Atru.chr8.2604 Acer truncatum HOM05D002134 ORTHO05D008658 3.5e-65 254.2 651 38.6
Ciclev10000375m.g Citrus clementina HOM05D002134 ORTHO05D008658 3.0e-64 251.1 616 39.4
Sabra02G0199600 Salix brachista HOM05D002134 ORTHO05D008658 3.0e-64 251.1 640 37.2
Atru.chr13.512 Acer truncatum HOM05D002134 ORTHO05D008658 8.6e-64 249.6 652 37.7
Actinidia38014 Actinidia chinensis HOM05D002134 ORTHO05D008658 8.6e-64 249.6 595 39.0
GSVIVG01009687001 Vitis vinifera HOM05D002134 ORTHO05D008658 4.3e-63 247.3 644 36.2
ECA247G2410 Erigeron canadensis HOM05D002134 ORTHO05D008658 2.2e-59 235.0 628 37.6
HanXRQChr04g0105601 Helianthus annuus HOM05D002134 ORTHO05D008658 2.4e-58 231.5 609 39.2
MBI16_g17456_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 3.2e-58 231.1 594 38.9
vmacro04518 Vaccinium macrocarpon HOM05D002134 ORTHO05D008658 3.2e-58 231.1 681 35.5
CANSAT25G1781 Cannabis sativa HOM05D002134 ORTHO05D008658 1.0e-56 226.1 607 38.2
Nn5g29542 Nelumbo nucifera HOM05D002134 ORTHO05D008658 1.0e-56 226.1 662 35.5
CSS0008789 Camellia sinensis var. sinensis HOM05D002134 ORTHO05D008658 1.7e-56 225.3 622 38.1
Glyma.06G033100 Glycine max HOM05D002134 ORTHO05D008658 1.7e-56 225.3 638 37.3
Glyma.04G033100 Glycine max HOM05D002134 ORTHO05D008658 2.3e-56 224.9 585 38.6
Phvul.009G057000 Phaseolus vulgaris HOM05D002134 ORTHO05D008658 2.3e-56 224.9 584 38.0
MD15G1030200 Malus domestica HOM05D002134 ORTHO05D008658 3.0e-56 224.6 600 39.8
MD08G1033500 Malus domestica HOM05D002134 ORTHO05D008658 6.6e-56 223.4 555 39.1
Sed0018102 Sechium edule HOM05D002134 ORTHO05D008658 1.1e-55 222.6 668 33.2
ClCG05G019130 Citrullus lanatus HOM05D002134 ORTHO05D008658 2.5e-55 221.5 696 34.8
Duzib093G1270 Durio zibethinus HOM05D002134 ORTHO05D008658 3.3e-55 221.1 650 36.5
DCAR_008767 Daucus carota HOM05D002134 ORTHO05D008658 1.6e-54 218.8 659 33.5
Lj1g0006718 Lotus japonicus HOM05D002134 ORTHO05D008658 3.6e-54 217.6 629 35.0
Lalb_Chr23g0266641 Lupinus albus HOM05D002134 ORTHO05D008658 4.8e-54 217.2 651 35.9
Cc10_g03060 Coffea canephora HOM05D002134 ORTHO05D008658 6.2e-54 216.9 591 36.2
Nitab4.5_0000523g0050 Nicotiana tabacum HOM05D002134 ORTHO05D008658 1.4e-53 215.7 585 36.1
Ca_15521_v3 Cicer arietinum L. HOM05D002134 ORTHO05D008658 3.1e-53 214.5 633 35.7
CsaV3_3G045010 Cucumis sativus L. HOM05D002134 ORTHO05D008658 9.0e-53 213.0 680 33.4
arahy.Tifrunner.gnm1.ann1.20CGAG Arachis hypogaea HOM05D002134 ORTHO05D008658 5.8e-52 210.3 608 40.0
Rhsim07G0237200 Rhododendron simsii HOM05D002134 ORTHO05D008658 5.8e-52 210.3 631 33.9
PSO675G8956 Papaver somniferum HOM05D002134 ORTHO05D008658 9.9e-52 209.5 666 37.8
Lsat_1_v5_gn_1_17581 Lactuca sativa HOM05D002134 ORTHO05D008658 4.9e-51 207.2 634 40.2
Medtr3g111740 Medicago truncatula HOM05D002134 ORTHO05D008658 4.9e-51 207.2 625 36.5
MELO3C003852.2 Cucumis melo HOM05D002134 ORTHO05D008658 8.4e-51 206.5 687 32.6
Aqoxy6G01051 Aquilegia oxysepala HOM05D002134 ORTHO05D008658 2.4e-50 204.9 587 36.3
Nitab4.5_0006995g0020 Nicotiana tabacum HOM05D002134 ORTHO05D008658 2.4e-50 204.9 588 34.9
TAR376G0546 Trochodendron aralioides HOM05D002134 ORTHO05D008658 3.2e-50 204.5 627 34.3
Prupe.1G381400 Prunus persica HOM05D002134 ORTHO05D008658 4.2e-50 204.1 652 35.0
Peaxi162Scf00925g00033 Petunia axillaris HOM05D002134 ORTHO05D008658 9.3e-50 203.0 577 33.6
SGA_v2.0_scaffold48G18075 Striga asiatica HOM05D002134 ORTHO05D008658 1.3e-48 199.1 645 35.8
PGR031G3893 Punica granatum HOM05D002134 ORTHO05D008658 5.1e-48 197.2 594 35.2
PSO541G2605 Papaver somniferum HOM05D002134 ORTHO05D008658 7.4e-47 193.4 676 36.1
Sopen07g013310 Solanum pennellii HOM05D002134 ORTHO05D008658 9.6e-47 193.0 612 35.3
Psat0s2660g0080 Pisum sativum HOM05D002134 ORTHO05D008658 1.3e-46 192.6 589 38.0
Solyc07g025380.3 Solanum lycopersicum HOM05D002134 ORTHO05D008658 1.3e-46 192.6 612 36.4
arahy.Tifrunner.gnm1.ann1.6UHH7V Arachis hypogaea HOM05D002134 ORTHO05D008658 1.6e-46 192.2 649 37.8
CAN.G52.14 Capsicum annuum HOM05D002134 ORTHO05D008658 2.4e-45 188.3 617 33.1
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 6.9e-45 186.8 572 36.9
TPR.G12392 Trifolium pratense HOM05D002134 ORTHO05D008658 3.4e-44 184.5 623 35.5
Migut.C00708 Erythranthe guttata HOM05D002134 ORTHO05D008658 9.9e-44 183.0 596 34.2
MBI16_g45959_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 2.4e-42 178.3 556 36.2
PGSC0003DMG400007581 Solanum tuberosum HOM05D002134 ORTHO05D008658 2.4e-42 178.3 629 35.9
FvH4_2g39970 Fragaria vesca HOM05D002134 ORTHO05D008658 3.5e-41 174.5 596 35.4
SalBow7G3154 Salvia bowleyana HOM05D002134 ORTHO05D008658 3.3e-39 167.9 606 31.8
Lj4A785T29 Lonicera japonica HOM05D002134 ORTHO05D008658 5.6e-39 167.2 480 34.0
Sed0020001 Sechium edule HOM05D002134 ORTHO05D008658 5.6e-39 167.2 541 34.4
RcHm_v2.0_Chr6g0300781 Rosa chinensis HOM05D002134 ORTHO05D008658 2.8e-38 164.9 576 35.8
ATR0733G232 Amborella trichopoda HOM05D002134 ORTHO05D008658 4.0e-37 161.0 592 35.0
Cpa.g.sc64.74 Carica papaya HOM05D002134 ORTHO05D008658 1.0e-35 156.4 351 40.5
FAN27G2069 Fragaria x ananassa HOM05D002134 ORTHO05D008658 1.4e-34 152.5 625 32.3
Sc02g0006290 Simmondsia chinensis HOM05D002134 ORTHO05D008658 1.9e-34 152.1 503 36.8
Zm00001eb061990 Zea mays HOM05D002134 ORTHO05D008658 9.3e-34 149.8 595 29.7
Hund27548 Selenicereus undatus HOM05D002134 ORTHO05D008658 1.2e-33 149.4 565 32.7
Hund27550 Selenicereus undatus HOM05D002134 ORTHO05D008658 1.2e-33 149.4 565 32.7
Lalb_Chr08g0245851 Lupinus albus HOM05D002134 ORTHO05D008658 2.7e-33 148.3 630 31.6
EL10Ac1g01833 Beta vulgaris HOM05D002134 ORTHO05D008658 7.9e-33 146.7 657 30.0
CDE02G0502 Ceratophyllum demersum HOM05D002134 ORTHO05D008658 3.1e-29 134.8 660 29.1
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 9.0e-29 133.3 234 43.6
unitig_37.g12967 Utricularia gibba HOM05D002134 ORTHO05D008658 2.2e-27 128.6 626 30.7
FAN15G0789 Fragaria x ananassa HOM05D002134 ORTHO05D003893 3.8e-27 127.9 593 32.2
Ah.11g043170 Amaranthus hybridus HOM05D002134 ORTHO05D008658 1.6e-25 122.5 614 32.4
FAN20G2431 Fragaria x ananassa HOM05D002134 ORTHO05D003893 8.7e-24 116.7 596 31.9
Hma1.2p1_0203F.1_g086500 Hydrangea macrophylla HOM05D002134 ORTHO05D008658 8.7e-24 116.7 290 35.2
AUR62034948 Chenopodium quinoa HOM05D002134 ORTHO05D008658 1.1e-18 99.8 609 26.3
SEGI_00628 Sequoiadendron giganteum HOM05D002134 ORTHO05D008658 7.2e-18 97.1 653 26.8
SHI17315 Sapria himalayana HOM05D002134 ORTHO05D008658 2.7e-17 95.1 232 37.1
HPP92_018472 Vanilla planifolia HOM05D002134 ORTHO05D008658 2.2e-14 85.5 365 29.6
AUR62035457 Chenopodium quinoa HOM05D002134 ORTHO05D008658 3.1e-13 81.6 647 25.7
Cpa.g.sc64.73 Carica papaya HOM05D002134 ORTHO05D008658 4.1e-13 81.3 207 35.7
Mapoly0032s0034 Marchantia polymorpha HOM05D002134 ORTHO05D008658 1.5e-12 79.3 579 29.0
SMO144G0024 Selaginella moellendorffii HOM05D002134 ORTHO05D008658 7.7e-12 77.0 555 25.8
Pp3c7_550 Physcomitrium patens HOM05D002134 ORTHO05D008658 6.5e-11 73.9 688 25.9
Pp3c7_551 Physcomitrium patens HOM05D002134 ORTHO05D008658 6.5e-11 73.9 688 25.9
Oeu036193.1 Olea europaea HOM05D002134 ORTHO05D008658 5.1e-08 64.3 255 32.9
Peaxi162Scf00162g00213 Petunia axillaris HOM05D000561 ORTHO05D000514 4.4e-07 61.2 98 45.9
Actinidia29830 Actinidia chinensis HOM05D002134 ORTHO05D008658 5.7e-07 60.8 157 37.6


User provided reference genes

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