Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p48900 Brassica napus HOM05D007437 ORTHO05D009422 2.8e-69 265.4 159 100.0
BolC6t39926H Brassica oleracea HOM05D007437 ORTHO05D009422 5.4e-68 261.2 159 86.2
A07p40510 Brassica napus HOM05D007437 ORTHO05D009422 2.7e-67 258.8 159 86.8
AL2G34760 Arabidopsis lyrata HOM05D007437 ORTHO05D009422 3.2e-65 251.9 159 83.0
Carub.0002s2167 Capsella rubella HOM05D007437 ORTHO05D009422 3.6e-64 248.4 160 88.8
AT1G74880 Arabidopsis thaliana HOM05D007437 ORTHO05D009422 1.4e-63 246.5 159 80.5
BraA07t31596Z Brassica rapa HOM05D007437 ORTHO05D009422 1.5e-62 243.0 156 84.0
Thhalv10019178m.g Eutrema salsugineum HOM05D007437 ORTHO05D009422 3.1e-60 235.3 161 88.8
CARHR068200 Cardamine hirsuta HOM05D007437 ORTHO05D009422 3.8e-58 228.4 155 78.1
THA.LOC104813856 Tarenaya hassleriana HOM05D007437 ORTHO05D009422 4.6e-51 204.9 159 68.6
Aa31LG4G5100 Aethionema arabicum HOM05D007437 ORTHO05D009422 1.9e-49 199.5 164 79.3
BcaC08g46922 Brassica carinata HOM05D007437 ORTHO05D009422 3.6e-48 195.3 134 80.6
Manes.13G087100 Manihot esculenta HOM05D007437 ORTHO05D009422 3.1e-47 192.2 100 89.0
HanXRQChr14g0433361 Helianthus annuus HOM05D007437 ORTHO05D009422 5.2e-47 191.4 107 86.0
GSVIVG01026485001 Vitis vinifera HOM05D007437 ORTHO05D009422 5.2e-47 191.4 161 65.8
COL.COLO4_35739 Corchorus olitorius HOM05D007437 ORTHO05D009422 1.5e-46 189.9 101 88.1
CiPaw.04G082500 Carya illinoinensis HOM05D007437 ORTHO05D009422 2.0e-46 189.5 160 63.8
Duzib147G0634 Durio zibethinus HOM05D007437 ORTHO05D009422 4.4e-46 188.3 95 92.6
Sed0017320 Sechium edule HOM05D007437 ORTHO05D009422 4.4e-46 188.3 104 82.7
AUR62003561 Chenopodium quinoa HOM05D007437 ORTHO05D009422 5.8e-46 188.0 159 63.5
AUR62017875 Chenopodium quinoa HOM05D007437 ORTHO05D009422 5.8e-46 188.0 159 63.5
Medtr3g096290 Medicago truncatula HOM05D007437 ORTHO05D009422 5.8e-46 188.0 96 91.7
Gohir.D10G109201 Gossypium hirsutum HOM05D007437 ORTHO05D009422 7.5e-46 187.6 104 86.5
PGR119G2133 Punica granatum HOM05D007437 ORTHO05D009422 9.8e-46 187.2 104 87.5
Dinv24359 Davidia involucrata HOM05D007437 ORTHO05D009422 1.3e-45 186.8 161 65.8
Eucgr.I00205 Eucalyptus grandis HOM05D007437 ORTHO05D009422 1.7e-45 186.4 107 83.2
Lalb_Chr11g0068441 Lupinus albus HOM05D007437 ORTHO05D009422 1.7e-45 186.4 99 86.9
Gorai.011G119800 Gossypium raimondii HOM05D007437 ORTHO05D009422 2.2e-45 186.0 103 86.4
Nn5g28551 Nelumbo nucifera HOM05D007437 ORTHO05D009422 2.2e-45 186.0 100 88.0
Psat5g062800 Pisum sativum HOM05D007437 ORTHO05D009422 2.2e-45 186.0 99 86.9
Oeu033664.1 Olea europaea HOM05D007437 ORTHO05D009422 3.7e-45 185.3 104 83.7
RcHm_v2.0_Chr2g0120841 Rosa chinensis HOM05D007437 ORTHO05D009422 3.7e-45 185.3 104 82.7
Prupe.6G157800 Prunus persica HOM05D007437 ORTHO05D009422 4.9e-45 184.9 104 82.7
Gohir.A10G156422 Gossypium hirsutum HOM05D007437 ORTHO05D009422 6.4e-45 184.5 95 90.5
Hma1.2p1_0050F.1_g029150 Hydrangea macrophylla HOM05D007437 ORTHO05D009422 6.4e-45 184.5 94 89.4
MSTRG.23461 Avicennia marina HOM05D007437 ORTHO05D009422 8.3e-45 184.1 160 64.4
ECA238G2185 Erigeron canadensis HOM05D007437 ORTHO05D009422 8.3e-45 184.1 103 82.5
Potri.007G106500 Populus trichocarpa HOM05D007437 ORTHO05D009422 8.3e-45 184.1 100 85.0
Thecc.01G131700 Theobroma cacao HOM05D007437 ORTHO05D009422 8.3e-45 184.1 106 84.9
CAN.G582.8 Capsicum annuum HOM05D007437 ORTHO05D009422 1.1e-44 183.7 94 89.4
Cc07_g18480 Coffea canephora HOM05D007437 ORTHO05D009422 1.1e-44 183.7 163 63.2
Nitab4.5_0008132g0030 Nicotiana tabacum HOM05D007437 ORTHO05D009422 1.1e-44 183.7 101 83.2
Lsat_1_v5_gn_2_37340 Lactuca sativa HOM05D007437 ORTHO05D009422 1.9e-44 183.0 92 90.2
Nitab4.5_0000856g0100 Nicotiana tabacum HOM05D007437 ORTHO05D009422 1.9e-44 183.0 94 88.3
CANSAT01G2130 Cannabis sativa HOM05D007437 ORTHO05D009422 3.2e-44 182.2 101 85.1
MBI03_g35294_MAGBIO Magnolia biondii HOM05D007437 ORTHO05D009422 3.2e-44 182.2 102 82.4
SalBow6G6692 Salvia bowleyana HOM05D007437 ORTHO05D009422 3.2e-44 182.2 92 89.1
Solyc11g006020.2 Solanum lycopersicum HOM05D007437 ORTHO05D009422 3.2e-44 182.2 94 88.3
Glyma.06G153400 Glycine max HOM05D007437 ORTHO05D009422 4.1e-44 181.8 161 62.7
QL10p043643 Quercus lobata HOM05D007437 ORTHO05D009422 4.1e-44 181.8 160 63.1
Duzib264G1294 Durio zibethinus HOM05D007437 ORTHO05D009422 9.2e-44 180.6 104 83.7
Atru.chr4.895 Acer truncatum HOM05D007437 ORTHO05D009422 1.2e-43 180.3 170 68.2
Ca_16946_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 1.6e-43 179.9 101 83.2
Ca_16965_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 1.6e-43 179.9 101 83.2
Ciclev10002727m.g Citrus clementina HOM05D007437 ORTHO05D009422 1.6e-43 179.9 165 71.5
Migut.L00964 Erythranthe guttata HOM05D007437 ORTHO05D009422 1.6e-43 179.9 164 62.8
FvH4_1g24330 Fragaria vesca HOM05D007437 ORTHO05D009422 1.6e-43 179.9 162 62.3
TWI31G0094 Tripterygium wilfordii HOM05D007437 ORTHO05D009422 1.6e-43 179.9 158 63.3
FAN19G0121 Fragaria x ananassa HOM05D007437 ORTHO05D009422 2.0e-43 179.5 162 62.3
FAN23G1428 Fragaria x ananassa HOM05D007437 ORTHO05D009422 2.0e-43 179.5 162 62.3
FAN23G2875 Fragaria x ananassa HOM05D007437 ORTHO05D009422 2.0e-43 179.5 162 62.3
FAN26G0277 Fragaria x ananassa HOM05D007437 ORTHO05D009422 2.0e-43 179.5 162 62.3
TAR628G0551 Trochodendron aralioides HOM05D007437 ORTHO05D009422 2.7e-43 179.1 93 88.2
Phvul.009G150600 Phaseolus vulgaris HOM05D007437 ORTHO05D009422 3.5e-43 178.7 160 62.5
ATR1136G110 Amborella trichopoda HOM05D007437 ORTHO05D009422 6.0e-43 177.9 92 88.0
Aqoxy5G02234 Aquilegia oxysepala HOM05D007437 ORTHO05D009422 7.8e-43 177.6 92 88.0
VMungo1309G0428 Vigna mungo HOM05D007437 ORTHO05D009422 1.3e-42 176.8 161 62.1
CsaV3_6G041610 Cucumis sativus L. HOM05D007437 ORTHO05D009422 6.6e-42 174.5 88 89.8
PSO017G4908 Papaver somniferum HOM05D007437 ORTHO05D009422 8.6e-42 174.1 163 59.5
Rhsim10G0134900 Rhododendron simsii HOM05D007437 ORTHO05D009422 8.6e-42 174.1 91 87.9
CSS0043391 Camellia sinensis var. sinensis HOM05D007437 ORTHO05D009422 1.1e-41 173.7 89 87.6
Lj1g0016732 Lotus japonicus HOM05D007437 ORTHO05D009422 3.3e-41 172.2 161 66.5
SEGI_02322 Sequoiadendron giganteum HOM05D007437 ORTHO05D009422 4.3e-41 171.8 108 77.8
AagrBONN_evm.TU.Sc2ySwM_344.3842 Anthoceros agrestis HOM05D007437 ORTHO05D009422 7.3e-41 171.0 101 77.2
arahy.Tifrunner.gnm1.ann1.1RKJ3P Arachis hypogaea HOM05D007437 ORTHO05D009422 7.3e-41 171.0 83 92.8
ClCG01G015390 Citrullus lanatus HOM05D007437 ORTHO05D009422 9.5e-41 170.6 154 61.7
unitig_699.g19721 Utricularia gibba HOM05D007437 ORTHO05D009422 9.5e-41 170.6 100 81.0
MELO3C008059.2 Cucumis melo HOM05D007437 ORTHO05D009422 1.2e-40 170.2 94 83.0
QL05p004660 Quercus lobata HOM05D007437 ORTHO05D009422 1.2e-40 170.2 151 62.9
PSO170G6470 Papaver somniferum HOM05D007437 ORTHO05D009422 1.6e-40 169.9 165 58.2
Sp5g30020 Schrenkiella parvula HOM05D007437 ORTHO05D009422 2.1e-40 169.5 159 61.0
Actinidia20077 Actinidia chinensis HOM05D007437 ORTHO05D009422 2.8e-40 169.1 153 62.1
Sopen11g001960 Solanum pennellii HOM05D007437 ORTHO05D009422 8.1e-40 167.5 116 70.7
Migut.L00881 Erythranthe guttata HOM05D007437 ORTHO05D009422 1.1e-39 167.2 86 87.2
Haze_25232 Corylus avellana HOM05D007437 ORTHO05D009422 1.4e-39 166.8 154 72.1
DCAR_014338 Daucus carota HOM05D007437 ORTHO05D009422 3.1e-39 165.6 89 87.6
Os01g0959900 Oryza sativa ssp. japonica HOM05D007437 ORTHO05D009422 1.2e-38 163.7 86 87.2
MD01G1003600 Malus domestica HOM05D007437 ORTHO05D009422 4.4e-38 161.8 80 87.5
Zm00001eb362560 Zea mays HOM05D007437 ORTHO05D009422 5.8e-38 161.4 81 92.6
TPR.G28241 Trifolium pratense HOM05D007437 ORTHO05D009422 7.5e-38 161.0 83 89.2
SMO367G0120 Selaginella moellendorffii HOM05D000331 ORTHO05D002018 2.1e-35 152.9 81 85.2
Cpa.g.sc42.157 Carica papaya HOM05D007437 ORTHO05D009422 2.7e-35 152.5 182 55.5
vmacro12802 Vaccinium macrocarpon HOM05D007437 ORTHO05D009422 7.8e-35 151.0 82 82.9
Mapoly0090s0072 Marchantia polymorpha HOM05D007437 ORTHO05D009422 1.3e-34 150.2 87 75.9
Peaxi162Scf00183g00218 Petunia axillaris HOM05D007437 ORTHO05D009422 3.9e-34 148.7 92 77.2
SMO367G1275 Selaginella moellendorffii HOM05D007437 ORTHO05D009422 8.6e-34 147.5 75 88.0
EL10Ac6g15309 Beta vulgaris HOM05D007437 ORTHO05D009422 7.3e-33 144.4 159 53.5
CDE08G0468 Ceratophyllum demersum HOM05D005037 ORTHO05D006274 7.3e-33 144.4 77 87.0
Pp3c1_14760 Physcomitrium patens HOM05D007437 ORTHO05D009422 6.2e-32 141.4 101 66.3
QL05p004576 Quercus lobata HOM05D007437 ORTHO05D009422 3.4e-30 135.6 68 88.2
CBR_g29941 Chara braunii HOM05D007437 ORTHO05D009422 8.4e-29 131.0 88 70.5
CDE02G1359 Ceratophyllum demersum HOM05D007437 ORTHO05D009422 1.4e-23 113.6 67 80.6
arahy.Tifrunner.gnm1.ann1.E1UNHC Arachis hypogaea HOM05D007437 ORTHO05D009422 1.9e-20 103.2 48 97.9


User provided reference genes

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