Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g46798 Brassica carinata HOM05D004624 ORTHO05D005357 4.3e-30 134.0 70 100.0
C06p47930 Brassica napus HOM05D004624 ORTHO05D005357 4.3e-30 134.0 70 100.0
BolC6t39828H Brassica oleracea HOM05D004624 ORTHO05D005357 2.2e-29 131.7 70 98.6
BraA07t31513Z Brassica rapa HOM05D004624 ORTHO05D005357 4.8e-29 130.6 68 98.5
Sp5g28970 Schrenkiella parvula HOM05D004624 ORTHO05D005357 3.2e-25 117.9 65 90.8
Thhalv10019414m.g Eutrema salsugineum HOM05D004624 ORTHO05D005357 5.5e-25 117.1 65 90.8
BraA07t30607Z Brassica rapa HOM05D004624 ORTHO05D005357 6.1e-24 113.6 66 87.9
C06p33840 Brassica napus HOM05D004624 ORTHO05D005357 3.0e-23 111.3 62 91.9
BcaB03g15084 Brassica carinata HOM05D004624 ORTHO05D005357 5.1e-23 110.5 67 85.1
BcaB03g15728 Brassica carinata HOM05D004624 ORTHO05D005357 6.7e-23 110.2 60 93.3
BcaC08g45622 Brassica carinata HOM05D004624 ORTHO05D005357 1.5e-22 109.0 62 90.3
THA.LOC109116606 Tarenaya hassleriana HOM05D004624 ORTHO05D005357 3.7e-21 104.4 61 86.9
AUR62018375 Chenopodium quinoa HOM05D004624 ORTHO05D005357 6.3e-21 103.6 58 91.4
GSVIVG01025772001 Vitis vinifera HOM05D004624 ORTHO05D005357 1.1e-20 102.8 62 85.5
AUR62030290 Chenopodium quinoa HOM05D004624 ORTHO05D005357 1.4e-20 102.4 58 89.7
Nitab4.5_0000021g0900 Nicotiana tabacum HOM05D004624 ORTHO05D005357 3.1e-20 101.3 62 82.3
Nitab4.5_0003447g0020 Nicotiana tabacum HOM05D004624 ORTHO05D005357 3.1e-20 101.3 69 75.4
PGSC0003DMG400026480 Solanum tuberosum HOM05D004624 ORTHO05D005357 3.1e-20 101.3 62 82.3
AL2G33600 Arabidopsis lyrata HOM05D004624 ORTHO05D005357 4.1e-20 100.9 62 80.6
AT1G73790 Arabidopsis thaliana HOM05D004624 ORTHO05D005357 4.1e-20 100.9 62 80.6
Carub.0002s2054 Capsella rubella HOM05D004624 ORTHO05D005357 4.1e-20 100.9 59 84.7
Cpa.g.sc116.84 Carica papaya HOM05D004624 ORTHO05D005357 4.1e-20 100.9 66 78.8
FvH4_5g29300 Fragaria vesca HOM05D004624 ORTHO05D005357 4.1e-20 100.9 60 83.3
FAN13G0550 Fragaria x ananassa HOM05D004624 ORTHO05D005357 4.1e-20 100.9 60 83.3
FAN18G4513 Fragaria x ananassa HOM05D004624 ORTHO05D005357 4.1e-20 100.9 60 83.3
Potri.016G034200 Populus trichocarpa HOM05D004624 ORTHO05D005357 4.1e-20 100.9 62 83.9
Sabra16G0036900 Salix brachista HOM05D004624 ORTHO05D005357 4.1e-20 100.9 62 82.3
TWI74G0338 Tripterygium wilfordii HOM05D004624 ORTHO05D005357 4.1e-20 100.9 58 87.9
Aa31LG4G10460 Aethionema arabicum HOM05D004624 ORTHO05D005357 5.3e-20 100.5 67 74.6
AL6G43100 Arabidopsis lyrata HOM05D004624 ORTHO05D005357 5.3e-20 100.5 59 84.7
AT4G09550 Arabidopsis thaliana HOM05D004624 ORTHO05D005357 5.3e-20 100.5 59 84.7
CARHR260420 Cardamine hirsuta HOM05D004624 ORTHO05D005357 5.3e-20 100.5 59 84.7
PGR142G2854 Punica granatum HOM05D004624 ORTHO05D005357 5.3e-20 100.5 58 87.9
Sp6g08080 Schrenkiella parvula HOM05D004624 ORTHO05D005357 5.3e-20 100.5 59 86.4
Sc13g0000990 Simmondsia chinensis HOM05D004624 ORTHO05D005357 5.3e-20 100.5 59 83.1
TWI53G0657 Tripterygium wilfordii HOM05D004624 ORTHO05D005357 5.3e-20 100.5 58 87.9
CANSAT78G0048 Cannabis sativa HOM05D004624 ORTHO05D005357 6.9e-20 100.1 62 82.3
CANSAT78G2147 Cannabis sativa HOM05D004624 ORTHO05D005357 6.9e-20 100.1 62 82.3
Carub.0006s2800 Capsella rubella HOM05D004624 ORTHO05D005357 6.9e-20 100.1 59 84.7
Cfa010947 Carpinus fangiana HOM05D004624 ORTHO05D005357 6.9e-20 100.1 58 86.2
Peaxi162Scf00516g00035 Petunia axillaris HOM05D004624 ORTHO05D005357 6.9e-20 100.1 62 80.6
vmacro17426 Vaccinium macrocarpon HOM05D004624 ORTHO05D005357 6.9e-20 100.1 62 82.3
CARHR066880 Cardamine hirsuta HOM05D004624 ORTHO05D005357 9.1e-20 99.8 62 82.3
DCAR_020589 Daucus carota HOM05D004624 ORTHO05D005357 9.1e-20 99.8 66 77.3
Gohir.A07G114500 Gossypium hirsutum HOM05D004624 ORTHO05D005357 9.1e-20 99.8 58 86.2
MD03G1113900 Malus domestica HOM05D004624 ORTHO05D005357 9.1e-20 99.8 58 84.5
RcHm_v2.0_Chr7g0222161 Rosa chinensis HOM05D004624 ORTHO05D005357 9.1e-20 99.8 60 81.7
vmacro08998 Vaccinium macrocarpon HOM05D004624 ORTHO05D005357 9.1e-20 99.8 58 86.2
Ah.13g077180 Amaranthus hybridus HOM05D004624 ORTHO05D005357 1.2e-19 99.4 58 84.5
CSS0035187 Camellia sinensis var. sinensis HOM05D004624 ORTHO05D005357 1.2e-19 99.4 62 82.3
Glyma.01G100100 Glycine max HOM05D004624 ORTHO05D005357 1.2e-19 99.4 58 86.2
Glyma.03G068900 Glycine max HOM05D004624 ORTHO05D005357 1.2e-19 99.4 58 86.2
Lalb_Chr19g0128161 Lupinus albus HOM05D004624 ORTHO05D005357 1.2e-19 99.4 58 86.2
Ciclev10010500m.g Citrus clementina HOM05D004624 ORTHO05D005357 1.5e-19 99.0 62 80.6
COL.COLO4_05868 Corchorus olitorius HOM05D004624 ORTHO05D005357 1.5e-19 99.0 62 82.3
MELO3C008583.2 Cucumis melo HOM05D004624 ORTHO05D005357 1.5e-19 99.0 67 73.1
Gorai.008G288400 Gossypium raimondii HOM05D004624 ORTHO05D005357 1.5e-19 99.0 58 86.2
Dinv15634 Davidia involucrata HOM05D004624 ORTHO05D005357 2.0e-19 98.6 62 80.6
Duzib205G0906 Durio zibethinus HOM05D004624 ORTHO05D005357 2.0e-19 98.6 58 86.2
Gohir.D07G118600 Gossypium hirsutum HOM05D004624 ORTHO05D005357 2.0e-19 98.6 58 84.5
Gorai.001G127500 Gossypium raimondii HOM05D004624 ORTHO05D005357 2.0e-19 98.6 67 77.6
QL07p012089 Quercus lobata HOM05D004624 ORTHO05D005357 2.0e-19 98.6 58 86.2
TAR633G0121 Trochodendron aralioides HOM05D004624 ORTHO05D005357 2.0e-19 98.6 63 73.0
FAN08G1983 Fragaria x ananassa HOM05D004624 ORTHO05D005357 3.4e-19 97.8 60 81.7
Hma1.2p1_0223F.1_g094210 Hydrangea macrophylla HOM05D004624 ORTHO05D005357 3.4e-19 97.8 62 79.0
Lj1g0004051 Lotus japonicus HOM05D004624 ORTHO05D005357 3.4e-19 97.8 75 73.3
Sabra06G0024000 Salix brachista HOM05D004624 ORTHO05D005357 3.4e-19 97.8 62 80.6
Atru.chr12.1276 Acer truncatum HOM05D004624 ORTHO05D005357 4.5e-19 97.4 62 82.3
Gohir.D12G268300 Gossypium hirsutum HOM05D004624 ORTHO05D005357 4.5e-19 97.4 58 84.5
Nn7g37680 Nelumbo nucifera HOM05D004624 ORTHO05D005357 4.5e-19 97.4 62 77.4
Potri.006G035900 Populus trichocarpa HOM05D004624 ORTHO05D005357 4.5e-19 97.4 62 80.6
Prupe.8G075600 Prunus persica HOM05D004624 ORTHO05D005357 4.5e-19 97.4 58 84.5
Rhsim13G0121200 Rhododendron simsii HOM05D004624 ORTHO05D005357 4.5e-19 97.4 62 79.0
Sopen03g028160 Solanum pennellii HOM05D004624 ORTHO05D005357 4.5e-19 97.4 62 80.6
arahy.Tifrunner.gnm1.ann1.QE2DSJ Arachis hypogaea HOM05D004624 ORTHO05D005357 5.9e-19 97.1 58 82.8
CAN.G732.25 Capsicum annuum HOM05D004624 ORTHO05D005357 5.9e-19 97.1 61 78.7
Eucgr.K01650 Eucalyptus grandis HOM05D004624 ORTHO05D005357 5.9e-19 97.1 58 82.8
Manes.10G062600 Manihot esculenta HOM05D004624 ORTHO05D005357 5.9e-19 97.1 58 84.5
Sabra16G0054100 Salix brachista HOM05D004624 ORTHO05D005357 5.9e-19 97.1 62 80.6
GSVIVG01021751001 Vitis vinifera HOM05D004624 ORTHO05D005357 5.9e-19 97.1 62 77.4
Cfa019982 Carpinus fangiana HOM05D004624 ORTHO05D005357 7.7e-19 96.7 56 85.7
Cc03_g11260 Coffea canephora HOM05D004624 ORTHO05D005357 7.7e-19 96.7 59 81.4
Haze_02997 Corylus avellana HOM05D004624 ORTHO05D005357 7.7e-19 96.7 58 82.8
Haze_20251 Corylus avellana HOM05D004624 ORTHO05D005357 7.7e-19 96.7 56 85.7
CsaV3_2G010390 Cucumis sativus L. HOM05D004624 ORTHO05D005357 7.7e-19 96.7 62 75.8
Migut.J01633 Erythranthe guttata HOM05D004624 ORTHO05D005357 7.7e-19 96.7 58 77.6
Phvul.001G120800 Phaseolus vulgaris HOM05D004624 ORTHO05D005357 7.7e-19 96.7 59 81.4
SHI11762 Sapria himalayana HOM05D004624 ORTHO05D005357 7.7e-19 96.7 62 79.0
Thecc.03G049000 Theobroma cacao HOM05D004624 ORTHO05D005357 7.7e-19 96.7 62 80.6
CSS0023921 Camellia sinensis var. sinensis HOM05D004624 ORTHO05D005357 1.0e-18 96.3 62 79.0
CSS0026932 Camellia sinensis var. sinensis HOM05D004624 ORTHO05D005357 1.0e-18 96.3 62 79.0
arahy.Tifrunner.gnm1.ann1.Q8D3CZ Arachis hypogaea HOM05D004624 ORTHO05D005357 1.3e-18 95.9 58 81.0
CiPaw.10G042300 Carya illinoinensis HOM05D004624 ORTHO05D005357 1.3e-18 95.9 58 81.0
Lj4g0019310 Lotus japonicus HOM05D004624 ORTHO05D005357 1.7e-18 95.5 58 82.8
Cpa.g.sc883.1 Carica papaya HOM05D004624 ORTHO05D005357 2.2e-18 95.1 62 77.4
Ca_07684_v3 Cicer arietinum L. HOM05D004624 ORTHO05D005357 2.2e-18 95.1 58 81.0
DCAR_028787 Daucus carota HOM05D004624 ORTHO05D005357 2.2e-18 95.1 66 72.7
Medtr2g008230 Medicago truncatula HOM05D004624 ORTHO05D005357 2.2e-18 95.1 58 79.3
Medtr4g124060 Medicago truncatula HOM05D004624 ORTHO05D005357 2.2e-18 95.1 58 79.3
Psat0s1206g0080 Pisum sativum HOM05D004624 ORTHO05D005357 2.2e-18 95.1 58 79.3
QL04p073121 Quercus lobata HOM05D004624 ORTHO05D005357 2.2e-18 95.1 55 87.3
Sed0025002 Sechium edule HOM05D004624 ORTHO05D005357 2.2e-18 95.1 62 75.8
ClCG11G007400 Citrullus lanatus HOM05D004624 ORTHO05D005357 2.9e-18 94.7 71 70.4
Nitab4.5_0006185g0060 Nicotiana tabacum HOM05D004624 ORTHO05D005357 2.9e-18 94.7 59 79.7
Rhsim04G0113600 Rhododendron simsii HOM05D004624 ORTHO05D005357 2.9e-18 94.7 59 81.4
TPR.G12609 Trifolium pratense HOM05D004624 ORTHO05D005357 2.9e-18 94.7 58 77.6
COL.COLO4_37401 Corchorus olitorius HOM05D004624 ORTHO05D005357 3.8e-18 94.4 56 83.9
PSO063G3723 Papaver somniferum HOM05D004624 ORTHO05D005357 3.8e-18 94.4 58 79.3
TPR.G16719 Trifolium pratense HOM05D004624 ORTHO05D005357 3.8e-18 94.4 58 77.6
Migut.J01335 Erythranthe guttata HOM05D004624 ORTHO05D005357 5.0e-18 94.0 59 79.7
Manes.15G024800 Manihot esculenta HOM05D004624 ORTHO05D005357 5.0e-18 94.0 62 75.8
RcHm_v2.0_Chr1g0330241 Rosa chinensis HOM05D004624 ORTHO05D005357 5.0e-18 94.0 58 79.3
PSO541G4755 Papaver somniferum HOM05D004624 ORTHO05D005357 6.5e-18 93.6 58 79.3
PSO675G0528 Papaver somniferum HOM05D004624 ORTHO05D005357 6.5e-18 93.6 68 69.1
Aqoxy3G00212 Aquilegia oxysepala HOM05D004624 ORTHO05D005357 8.5e-18 93.2 58 81.0
HanXRQChr11g0352301 Helianthus annuus HOM05D004624 ORTHO05D005357 8.5e-18 93.2 58 79.3
Lalb_Chr19g0128151 Lupinus albus HOM05D004624 ORTHO05D005357 8.5e-18 93.2 58 81.0
ECA248G3900 Erigeron canadensis HOM05D004624 ORTHO05D005357 1.1e-17 92.8 58 79.3
Nitab4.5_0002193g0050 Nicotiana tabacum HOM05D004624 ORTHO05D005357 1.4e-17 92.4 62 75.8
Aqoxy3G02929 Aquilegia oxysepala HOM05D004624 ORTHO05D005357 1.9e-17 92.0 58 79.3
Thecc.05G198400 Theobroma cacao HOM05D004624 ORTHO05D005357 1.9e-17 92.0 56 82.1
Migut.J01336 Erythranthe guttata HOM05D004624 ORTHO05D005357 2.5e-17 91.7 59 76.3
Nitab4.5_0000645g0040 Nicotiana tabacum HOM05D004624 ORTHO05D005357 3.2e-17 91.3 59 76.3
ECA238G3634 Erigeron canadensis HOM05D000185 ORTHO05D000105 4.2e-17 90.9 58 75.9
CDE05G2943 Ceratophyllum demersum HOM05D004624 ORTHO05D005357 7.2e-17 90.1 58 75.9
Sopen06g029060 Solanum pennellii HOM05D004624 ORTHO05D005357 9.4e-17 89.7 67 70.1
Nitab4.5_0006270g0030 Nicotiana tabacum HOM05D004624 ORTHO05D005357 1.2e-16 89.4 62 74.2
Peaxi162Scf00815g00038 Petunia axillaris HOM05D004624 ORTHO05D005357 1.2e-16 89.4 59 72.9
CAN.G65.122 Capsicum annuum HOM05D004624 ORTHO05D005357 1.6e-16 89.0 57 78.9
Actinidia05484 Actinidia chinensis HOM05D004624 ORTHO05D005357 2.1e-16 88.6 58 81.0
TAR627G0533 Trochodendron aralioides HOM05D004624 ORTHO05D005357 4.7e-16 87.4 59 72.9
MBI17_g08328_MAGBIO Magnolia biondii HOM05D004624 ORTHO05D005357 6.1e-16 87.0 54 79.6
EL10Ac4g09929 Beta vulgaris HOM05D004624 ORTHO05D005357 8.8e-15 83.2 55 74.5
unitig_746.g26892 Utricularia gibba HOM05D004624 ORTHO05D005357 4.4e-14 80.9 57 68.4
Zm00001eb062930 Zea mays HOM05D004624 ORTHO05D005357 2.2e-13 78.6 51 76.5
FvH4_2g13790 Fragaria vesca HOM05D004624 ORTHO05D005357 4.8e-13 77.4 63 61.9
FAN24G0569 Fragaria x ananassa HOM05D004624 ORTHO05D005357 4.8e-13 77.4 63 61.9
Os03g0435900 Oryza sativa ssp. japonica HOM05D004624 ORTHO05D005357 4.8e-13 77.4 54 70.4
Os03g0824000 Oryza sativa ssp. japonica HOM05D004624 ORTHO05D005357 4.8e-13 77.4 54 70.4
Os11g0368172 Oryza sativa ssp. japonica HOM05D004624 ORTHO05D005357 4.8e-13 77.4 54 70.4
AagrBONN_evm.TU.Sc2ySwM_340.447 Anthoceros agrestis HOM05D004624 ORTHO05D005357 6.3e-13 77.0 60 58.3
Atru.chr12.1164 Acer truncatum HOM05D004624 ORTHO05D005357 8.2e-13 76.6 44 86.4
MD11G1133700 Malus domestica HOM05D004624 ORTHO05D005357 8.2e-13 76.6 40 92.5
Solyc03g097400.1 Solanum lycopersicum HOM05D004624 ORTHO05D005357 8.2e-13 76.6 44 84.1
Pp3c13_4560 Physcomitrium patens HOM05D004624 ORTHO05D005357 1.4e-12 75.9 67 61.2
PRCOL_00005147 Prasinoderma coloniale HOM05D004624 ORTHO05D005357 3.1e-12 74.7 58 62.1
Pp3c12_8260 Physcomitrium patens HOM05D004624 ORTHO05D005357 4.1e-12 74.3 59 62.7
CBR_g23420 Chara braunii HOM05D004624 ORTHO05D005357 9.1e-12 73.2 59 57.6
SMO172G0211 Selaginella moellendorffii HOM05D004624 ORTHO05D005357 1.2e-11 72.8 53 66.0
HPP92_018529 Vanilla planifolia HOM05D004624 ORTHO05D005357 1.2e-11 72.8 65 52.3
Mapoly0109s0047 Marchantia polymorpha HOM05D004624 ORTHO05D005357 2.6e-11 71.6 59 59.3
SalBow6G5026 Salvia bowleyana HOM05D004624 ORTHO05D005357 4.5e-11 70.9 40 82.5
MCO02G029 Micromonas commoda HOM05D004624 ORTHO05D005357 2.2e-10 68.6 59 54.2
Solyc06g072690.3 Solanum lycopersicum HOM05D004624 ORTHO05D005357 1.1e-09 66.2 41 78.0
Lsat_1_v5_gn_1_43120 Lactuca sativa HOM05D004624 ORTHO05D005357 6.1e-08 60.5 32 90.6
Cre14.g610000 Chlamydomonas reinhardtii HOM05D004624 ORTHO05D005357 1.4e-07 59.3 48 54.2


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