Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p47890 Brassica napus HOM05D007058 ORTHO05D009036 1.9e-240 835.5 433 100.0
BolC6t39824H Brassica oleracea HOM05D007058 ORTHO05D009036 1.9e-240 835.5 433 100.0
A07p39600 Brassica napus HOM05D007058 ORTHO05D009036 2.4e-232 808.5 433 97.0
BraA07t31509Z Brassica rapa HOM05D007058 ORTHO05D009036 1.6e-231 805.8 433 96.8
BcaB03g15080 Brassica carinata HOM05D007058 ORTHO05D009036 5.1e-222 774.2 433 93.8
Sp5g28930 Schrenkiella parvula HOM05D007058 ORTHO05D009036 1.8e-206 722.6 433 86.6
Thhalv10018574m.g Eutrema salsugineum HOM05D007058 ORTHO05D009036 1.3e-204 716.5 437 85.1
AT1G73740 Arabidopsis thaliana HOM05D007058 ORTHO05D009036 3.5e-202 708.4 434 84.6
AL2G33550 Arabidopsis lyrata HOM05D007058 ORTHO05D009036 2.2e-201 705.7 434 83.9
CARHR066810 Cardamine hirsuta HOM05D007058 ORTHO05D009036 1.0e-198 696.8 432 84.3
Carub.0002s2049 Capsella rubella HOM05D007058 ORTHO05D009036 6.3e-196 687.6 441 81.0
Aa31LG4G4070 Aethionema arabicum HOM05D007058 ORTHO05D009036 2.2e-164 582.8 425 72.7
THA.LOC104813907 Tarenaya hassleriana HOM05D007058 ORTHO05D009036 1.7e-156 556.6 423 67.6
Cpa.g.sc3.458 Carica papaya HOM05D007058 ORTHO05D009036 6.9e-126 454.9 400 58.0
Dinv12229 Davidia involucrata HOM05D007058 ORTHO05D009036 6.4e-124 448.4 429 56.2
Manes.01G015400 Manihot esculenta HOM05D007058 ORTHO05D009036 9.3e-123 444.5 437 54.2
COL.COLO4_38517 Corchorus olitorius HOM05D007058 ORTHO05D009036 3.5e-122 442.6 434 55.5
Hma1.2p1_2594F.1_g325085 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 1.8e-121 440.3 425 54.4
Duzib205G0828 Durio zibethinus HOM05D007058 ORTHO05D009036 3.0e-121 439.5 408 56.9
Hma1.2p1_1614F.1_g293670 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 3.0e-121 439.5 431 54.5
Peaxi162Scf00683g00337 Petunia axillaris HOM05D007058 ORTHO05D009036 3.7e-119 432.6 395 54.9
GSVIVG01008345001 Vitis vinifera HOM05D007058 ORTHO05D009036 3.7e-119 432.6 432 55.3
Thecc.03G043100 Theobroma cacao HOM05D007058 ORTHO05D009036 1.1e-118 431.0 424 55.0
Gohir.A07G059500 Gossypium hirsutum HOM05D007058 ORTHO05D009036 1.4e-118 430.6 406 55.2
Ciclev10020201m.g Citrus clementina HOM05D007058 ORTHO05D009036 3.1e-118 429.5 427 54.1
Nitab4.5_0001456g0070 Nicotiana tabacum HOM05D007058 ORTHO05D009036 3.8e-116 422.5 399 53.9
Nitab4.5_0006894g0050 Nicotiana tabacum HOM05D007058 ORTHO05D009036 6.5e-116 421.8 399 53.9
Lj9A424T33 Lonicera japonica HOM05D007058 ORTHO05D009036 1.1e-115 421.0 434 53.5
QL10p026796 Quercus lobata HOM05D007058 ORTHO05D009036 1.9e-115 420.2 430 53.0
FAN18G2897 Fragaria x ananassa HOM05D007058 ORTHO05D009036 7.1e-115 418.3 420 54.5
MBI16_g25105_MAGBIO Magnolia biondii HOM05D007058 ORTHO05D009036 7.1e-115 418.3 432 54.2
Sc12g0007400 Simmondsia chinensis HOM05D007058 ORTHO05D009036 7.1e-115 418.3 440 53.4
Nn3g17960 Nelumbo nucifera HOM05D007058 ORTHO05D009036 1.6e-114 417.2 421 55.3
TWI60G0394 Tripterygium wilfordii HOM05D007058 ORTHO05D009036 2.7e-114 416.4 434 53.0
CANSAT80G0903 Cannabis sativa HOM05D007058 ORTHO05D009036 3.5e-114 416.0 400 54.0
Potri.012G053600 Populus trichocarpa HOM05D007058 ORTHO05D009036 4.6e-114 415.6 410 52.7
FAN08G1503 Fragaria x ananassa HOM05D007058 ORTHO05D009036 7.9e-114 414.8 426 54.0
FAN04G2101 Fragaria x ananassa HOM05D007058 ORTHO05D009036 1.0e-113 414.5 420 54.5
Atru.chr9.916 Acer truncatum HOM05D007058 ORTHO05D009036 1.8e-113 413.7 432 52.8
Actinidia02670 Actinidia chinensis HOM05D007058 ORTHO05D009036 3.9e-113 412.5 443 52.6
FAN13G1457 Fragaria x ananassa HOM05D007058 ORTHO05D009036 1.1e-112 411.0 426 53.5
Sabra12G0037400 Salix brachista HOM05D007058 ORTHO05D009036 1.1e-112 411.0 414 52.9
Solyc03g118860.3 Solanum lycopersicum HOM05D007058 ORTHO05D009036 2.5e-112 409.8 434 49.5
Cc04_g06820 Coffea canephora HOM05D007058 ORTHO05D009036 3.3e-112 409.5 408 54.7
PGSC0003DMG400005667 Solanum tuberosum HOM05D007058 ORTHO05D009036 5.7e-112 408.7 443 49.0
CAN.G1129.46 Capsicum annuum HOM05D007058 ORTHO05D009036 9.6e-112 407.9 418 51.0
PGR044G0638 Punica granatum HOM05D007058 ORTHO05D009036 9.6e-112 407.9 399 54.9
Sed0017039 Sechium edule HOM05D007058 ORTHO05D009036 1.6e-111 407.1 401 54.6
Sopen03g037810 Solanum pennellii HOM05D007058 ORTHO05D009036 1.6e-111 407.1 436 49.3
PSO063G1254 Papaver somniferum HOM05D007058 ORTHO05D009036 1.8e-110 403.7 383 55.4
TAR629G3445 Trochodendron aralioides HOM05D007058 ORTHO05D009036 2.4e-110 403.3 423 53.4
Prupe.5G225300 Prunus persica HOM05D007058 ORTHO05D009036 3.1e-110 402.9 430 51.4
arahy.Tifrunner.gnm1.ann1.8NC01M Arachis hypogaea HOM05D007058 ORTHO05D009036 4.0e-110 402.5 400 53.0
MELO3C002112.2 Cucumis melo HOM05D007058 ORTHO05D009036 5.3e-110 402.1 430 50.9
CsaV3_1G006960 Cucumis sativus L. HOM05D007058 ORTHO05D009036 9.0e-110 401.4 438 50.7
MD06G1220900 Malus domestica HOM05D007058 ORTHO05D009036 9.0e-110 401.4 435 50.3
Hund02350 Selenicereus undatus HOM05D007058 ORTHO05D009036 1.2e-109 401.0 412 52.4
PSO782G5502 Papaver somniferum HOM05D007058 ORTHO05D009036 2.0e-109 400.2 384 54.4
TAR535G0005 Trochodendron aralioides HOM05D007058 ORTHO05D009036 2.6e-109 399.8 398 55.0
Aqoxy3G04055 Aquilegia oxysepala HOM05D007058 ORTHO05D009036 7.6e-109 398.3 418 51.9
TAR371G0970 Trochodendron aralioides HOM05D007058 ORTHO05D009036 1.3e-108 397.5 426 54.2
RcHm_v2.0_Chr7g0179381 Rosa chinensis HOM05D007058 ORTHO05D009036 5.0e-108 395.6 423 51.5
arahy.Tifrunner.gnm1.ann1.LC4GJT Arachis hypogaea HOM05D007058 ORTHO05D009036 6.5e-108 395.2 418 51.4
ClCG04G010870 Citrullus lanatus HOM05D007058 ORTHO05D009036 8.4e-108 394.8 429 50.1
EL10Ac5g11484 Beta vulgaris HOM05D007058 ORTHO05D009036 1.9e-107 393.7 424 51.2
MD14G1230300 Malus domestica HOM05D007058 ORTHO05D009036 1.6e-106 390.6 434 50.2
AUR62033787 Chenopodium quinoa HOM05D007058 ORTHO05D009036 5.1e-105 385.6 405 51.6
Lj4g0007182 Lotus japonicus HOM05D007058 ORTHO05D009036 8.7e-105 384.8 438 49.3
Migut.I00419 Erythranthe guttata HOM05D007058 ORTHO05D009036 1.9e-104 383.6 417 51.3
Haze_18744 Corylus avellana HOM05D007058 ORTHO05D009036 9.0e-102 374.8 407 51.4
ATR0681G321 Amborella trichopoda HOM05D007058 ORTHO05D009036 2.9e-100 369.8 397 51.1
Eucgr.K02237 Eucalyptus grandis HOM05D007058 ORTHO05D009036 6.1e-98 362.1 348 54.6
VMungo0251G0619 Vigna mungo HOM05D007058 ORTHO05D009036 4.3e-96 355.9 423 46.8
HPP92_023400 Vanilla planifolia HOM05D007058 ORTHO05D009036 8.2e-95 351.7 398 47.0
Oeu017513.1 Olea europaea HOM05D007058 ORTHO05D009036 2.6e-93 346.7 341 54.8
Gorai.001G067900 Gossypium raimondii HOM05D007058 ORTHO05D009036 6.5e-92 342.0 357 52.1
Phvul.002G325300 Phaseolus vulgaris HOM05D007058 ORTHO05D009036 7.2e-83 312.0 341 49.0
AUR62029919 Chenopodium quinoa HOM05D007058 ORTHO05D009036 2.3e-81 307.0 327 51.7
HPP92_027335 Vanilla planifolia HOM05D007058 ORTHO05D009036 6.7e-81 305.4 388 44.8
HPP92_017197 Vanilla planifolia HOM05D007058 ORTHO05D009036 1.1e-80 304.7 415 43.4
Mapoly0014s0012 Marchantia polymorpha HOM05D007058 ORTHO05D009036 6.1e-74 282.3 385 41.8
FvH4_5g16720 Fragaria vesca HOM05D007058 ORTHO05D009036 8.0e-74 282.0 312 51.0
Glyma.05G242000 Glycine max HOM05D007058 ORTHO05D009036 5.2e-73 279.3 331 45.6
Rhsim08G0129700 Rhododendron simsii HOM05D007058 ORTHO05D009036 6.5e-68 262.3 307 50.8
SMO271G0182 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 6.1e-66 255.8 393 38.2
Mapoly0014s0018 Marchantia polymorpha HOM05D007058 ORTHO05D009036 5.2e-65 252.7 353 41.6
Pp3c1_26880 Physcomitrium patens HOM05D007058 ORTHO05D009036 1.2e-64 251.5 373 39.4
SMO308G0041 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 8.6e-60 235.3 429 35.4
AagrBONN_evm.TU.Sc2ySwM_228.2408 Anthoceros agrestis HOM05D007058 ORTHO05D009036 6.8e-57 225.7 309 44.3
Os01g0516700 Oryza sativa ssp. japonica HOM05D007058 ORTHO05D009036 1.7e-55 221.1 332 40.1
BcaC08g46795 Brassica carinata HOM05D007058 ORTHO05D009036 3.7e-55 219.9 259 55.6
PRCOL_00000956 Prasinoderma coloniale HOM05D007058 ORTHO05D009036 1.5e-48 198.0 377 35.8
Gohir.D07G064300 Gossypium hirsutum HOM05D007058 ORTHO05D009036 3.7e-47 193.4 246 45.5
MCO02G081 Micromonas commoda HOM05D007058 ORTHO05D009036 3.0e-44 183.7 400 33.2
Zm00001eb132130 Zea mays HOM05D007058 ORTHO05D009036 4.6e-37 159.8 253 39.9
Glyma.08G049450 Glycine max HOM05D007058 ORTHO05D009036 7.3e-35 152.5 116 62.9
Glyma.08G049500 Glycine max HOM05D007058 ORTHO05D009036 5.2e-33 146.4 241 37.8
CBR_g74658 Chara braunii HOM05D007058 ORTHO05D009036 3.4e-32 143.7 602 23.9
CAN.G1074.8 Capsicum annuum HOM05D007058 ORTHO05D009036 7.1e-30 136.0 128 50.8
arahy.Tifrunner.gnm1.ann1.4SU3WD Arachis hypogaea HOM05D007058 ORTHO05D009036 2.1e-26 124.4 132 47.0
SalBow5G0499 Salvia bowleyana HOM05D007058 ORTHO05D010040 9.3e-22 109.0 134 48.5
Gorai.001G067800 Gossypium raimondii HOM05D007058 ORTHO05D009036 1.3e-18 98.6 81 59.3
CAN.G169.6 Capsicum annuum HOM05D007058 ORTHO05D009036 5.3e-17 93.2 114 43.0
Cre12.g527950 Chlamydomonas reinhardtii HOM05D007058 ORTHO05D009036 9.9e-16 89.0 379 25.1
SEGI_28231 Sequoiadendron giganteum HOM05D007058 ORTHO05D009036 2.2e-15 87.8 75 56.0
AUR62029918 Chenopodium quinoa HOM05D007058 ORTHO05D009036 1.1e-14 85.5 79 50.6
Ah.11g045170 Amaranthus hybridus HOM05D007058 ORTHO05D009036 1.4e-14 85.1 79 53.2
Gohir.D07G064250 Gossypium hirsutum HOM05D007058 ORTHO05D009036 3.5e-13 80.5 62 64.5
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 2.3e-12 77.8 77 48.1
Rhsim08G0129900 Rhododendron simsii HOM05D007058 ORTHO05D009036 2.9e-07 60.8 62 50.0
BolC7t45491H Brassica oleracea HOM05D000761 ORTHO05D028316 3.2e-06 57.4 68 52.9
Rhsim08G0129800 Rhododendron simsii HOM05D007058 ORTHO05D021411 4.2e-06 57.0 37 70.3


User provided reference genes

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