Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p47310 Brassica napus HOM05D008232 ORTHO05D010390 2.7e-58 228.4 111 100.0
BolC6t39770H Brassica oleracea HOM05D008232 ORTHO05D010390 2.3e-57 225.3 111 99.1
A07p39100 Brassica napus HOM05D008232 ORTHO05D010390 1.2e-55 219.5 111 95.5
BraA07t31461Z Brassica rapa HOM05D008232 ORTHO05D010390 2.4e-54 215.3 111 93.7
Sp5g28080 Schrenkiella parvula HOM05D008232 ORTHO05D010390 1.0e-49 199.9 111 87.4
Thhalv10019346m.g Eutrema salsugineum HOM05D008232 ORTHO05D010390 5.1e-49 197.6 111 87.4
AT1G73120 Arabidopsis thaliana HOM05D008232 ORTHO05D010390 1.4e-46 189.5 111 83.8
CARHR066090 Cardamine hirsuta HOM05D008232 ORTHO05D010390 4.0e-46 188.0 111 84.7
Carub.0002s1989 Capsella rubella HOM05D008232 ORTHO05D010390 1.5e-45 186.0 111 82.0
AL2G32870 Arabidopsis lyrata HOM05D008232 ORTHO05D010390 2.6e-45 185.3 111 81.1
BraA02t06884Z Brassica rapa HOM05D008232 ORTHO05D010390 2.7e-42 175.3 112 78.6
A02p18450 Brassica napus HOM05D008232 ORTHO05D010390 7.8e-42 173.7 112 77.7
C02p30580 Brassica napus HOM05D008232 ORTHO05D010390 1.0e-41 173.3 112 76.8
Aa31LG4G3390 Aethionema arabicum HOM05D008232 ORTHO05D010390 2.8e-39 165.2 112 75.0
THA.LOC104813941 Tarenaya hassleriana HOM05D008232 ORTHO05D010390 7.4e-32 140.6 112 66.1
Potri.010G248600 Populus trichocarpa HOM05D008232 ORTHO05D010390 2.9e-20 102.1 110 53.6
FAN14G2943 Fragaria x ananassa HOM05D008232 ORTHO05D010390 5.5e-19 97.8 107 49.5
FvH4_6g27930 Fragaria vesca HOM05D008232 ORTHO05D010390 1.2e-18 96.7 107 49.5
FAN02G3893 Fragaria x ananassa HOM05D008232 ORTHO05D010390 1.2e-18 96.7 107 49.5
Migut.I00645 Erythranthe guttata HOM05D008232 ORTHO05D010390 7.9e-18 94.0 114 51.8
FAN05G2300 Fragaria x ananassa HOM05D008232 ORTHO05D010390 1.3e-17 93.2 107 47.7
MD09G1231600 Malus domestica HOM05D008232 ORTHO05D010390 1.8e-17 92.8 107 47.7
PGR031G2543 Punica granatum HOM05D008232 ORTHO05D010390 1.8e-17 92.8 108 50.9
Peaxi162Scf00207g00211 Petunia axillaris HOM05D005461 ORTHO05D007157 3.0e-17 92.0 104 49.0
Ciclev10026814m.g Citrus clementina HOM05D008232 ORTHO05D010390 8.7e-17 90.5 105 46.7
QL04p062033 Quercus lobata HOM05D008232 ORTHO05D010390 1.9e-16 89.4 102 50.0
FAN09G3435 Fragaria x ananassa HOM05D008232 ORTHO05D010390 5.7e-16 87.8 91 50.5
Solyc06g068660.3 Solanum lycopersicum HOM05D008232 ORTHO05D010390 9.7e-16 87.0 107 42.1
Sopen06g025940 Solanum pennellii HOM05D008232 ORTHO05D010390 9.7e-16 87.0 107 42.1
Dinv23254 Davidia involucrata HOM05D008232 ORTHO05D010390 2.8e-15 85.5 103 52.4
CiPaw.03G112900 Carya illinoinensis HOM05D008232 ORTHO05D010390 3.7e-15 85.1 105 50.5
Prupe.3G107800 Prunus persica HOM05D008232 ORTHO05D010390 6.3e-15 84.3 106 44.3
Sed0014962 Sechium edule HOM05D008232 ORTHO05D010390 2.4e-14 82.4 102 45.1
Oeu036452.1 Olea europaea HOM05D008232 ORTHO05D010390 6.9e-14 80.9 109 42.2
Eucgr.J03142 Eucalyptus grandis HOM05D008232 ORTHO05D010390 1.2e-13 80.1 107 49.5
HanXRQChr09g0274311 Helianthus annuus HOM05D008232 ORTHO05D010390 1.5e-13 79.7 102 42.2
Thecc.06G043900 Theobroma cacao HOM05D000051 ORTHO05D000015 2.0e-13 79.3 104 44.2
Atru.chr1.2756 Acer truncatum HOM05D008232 ORTHO05D010390 3.4e-13 78.6 106 44.3
Duzib235G0354 Durio zibethinus HOM05D008232 ORTHO05D010390 3.4e-13 78.6 103 42.7
MELO3C016243.2 Cucumis melo HOM05D008232 ORTHO05D010390 5.9e-13 77.8 102 41.2
RcHm_v2.0_Chr2g0131491 Rosa chinensis HOM05D008232 ORTHO05D010390 7.6e-13 77.4 92 45.7
CsaV3_4G007020 Cucumis sativus L. HOM05D008232 ORTHO05D010390 1.0e-12 77.0 102 41.2
SalBow7G0137 Salvia bowleyana HOM05D008232 ORTHO05D010390 1.1e-11 73.6 96 42.7
Nitab4.5_0004890g0010 Nicotiana tabacum HOM05D008232 ORTHO05D010390 1.9e-11 72.8 91 42.9
Manes.06G016400 Manihot esculenta HOM05D008232 ORTHO05D010390 4.2e-11 71.6 113 42.5
Cc04_g05510 Coffea canephora HOM05D000169 ORTHO05D001214 7.2e-11 70.9 90 44.4
Cfa023521 Carpinus fangiana HOM05D008232 ORTHO05D010390 1.2e-10 70.1 90 48.9
Gohir.A05G117900 Gossypium hirsutum HOM05D008232 ORTHO05D010390 1.2e-10 70.1 103 39.8
Gorai.009G122800 Gossypium raimondii HOM05D008232 ORTHO05D010390 1.2e-10 70.1 103 39.8
Lsat_1_v5_gn_4_85220 Lactuca sativa HOM05D008232 ORTHO05D010390 1.2e-10 70.1 107 38.3
Gohir.D05G118800 Gossypium hirsutum HOM05D008232 ORTHO05D010390 1.6e-10 69.7 103 39.8
Aqoxy7G03060 Aquilegia oxysepala HOM05D008232 ORTHO05D010390 1.0e-09 67.0 103 36.9
ClCG07G011230 Citrullus lanatus HOM05D008232 ORTHO05D010390 3.9e-09 65.1 93 37.6
Actinidia08925 Actinidia chinensis HOM05D008232 ORTHO05D010390 5.1e-09 64.7 72 51.4
TAR383G0592 Trochodendron aralioides HOM05D008232 ORTHO05D010390 6.7e-09 64.3 103 35.9
Cpa.g.sc2471.1 Carica papaya HOM05D008232 ORTHO05D010390 8.8e-09 63.9 93 41.9
PSO478G5163 Papaver somniferum HOM05D008232 ORTHO05D010390 8.8e-09 63.9 102 33.3
Hund22378 Selenicereus undatus HOM05D008232 ORTHO05D010390 9.7e-08 60.5 98 35.7
TWI31G1109 Tripterygium wilfordii HOM05D008232 ORTHO05D010390 9.7e-08 60.5 88 42.0
COL.COLO4_26749 Corchorus olitorius HOM05D008232 ORTHO05D010390 1.7e-07 59.7 88 39.8
CANSAT64G1479 Cannabis sativa HOM05D008232 ORTHO05D010390 2.8e-07 58.9 112 36.6
Sc10g0006420 Simmondsia chinensis HOM05D008232 ORTHO05D010390 1.8e-06 56.2 103 39.8
PSO782G2603 Papaver somniferum HOM05D008232 ORTHO05D010390 4.1e-06 55.1 86 37.2


User provided reference genes

Program Settings