Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p46580 Brassica napus HOM05D007344 ORTHO05D032082 5.2e-90 334.3 167 100.0
BcaC08g46681 Brassica carinata HOM05D007344 ORTHO05D032082 1.3e-85 319.7 159 100.0
BolC6t39703H Brassica oleracea HOM05D007344 ORTHO05D032082 1.5e-76 289.7 145 100.0
BcaB03g14975 Brassica carinata HOM05D007344 ORTHO05D009010 7.6e-49 197.6 149 69.8
BcaC08g46679 Brassica carinata HOM05D007344 ORTHO05D009010 1.0e-48 197.2 139 74.1
C06p46550 Brassica napus HOM05D007344 ORTHO05D009010 1.0e-48 197.2 139 74.1
BolC6t39700H Brassica oleracea HOM05D007344 ORTHO05D009010 1.0e-48 197.2 139 74.1
BraA07t31405Z Brassica rapa HOM05D007344 ORTHO05D009010 1.9e-47 193.0 139 71.2
A07p38440 Brassica napus HOM05D007344 ORTHO05D009010 6.0e-46 188.0 139 69.8
BcaC08g46678 Brassica carinata HOM05D007344 ORTHO05D009010 3.9e-37 158.7 144 63.2
C06p46540 Brassica napus HOM05D007344 ORTHO05D009010 3.9e-37 158.7 144 63.2
BolC6t39699H Brassica oleracea HOM05D007344 ORTHO05D009010 3.9e-37 158.7 144 63.2
A07p38420 Brassica napus HOM05D007344 ORTHO05D009010 1.9e-36 156.4 144 62.5
BraA07t31403Z Brassica rapa HOM05D007344 ORTHO05D009010 1.9e-36 156.4 144 62.5
C06p46590 Brassica napus HOM05D007344 ORTHO05D009010 2.9e-32 142.5 141 59.6
BolC6t39705H Brassica oleracea HOM05D007344 ORTHO05D009010 2.9e-32 142.5 141 59.6
Carub.0002s1910 Capsella rubella HOM05D007344 ORTHO05D009010 7.4e-28 127.9 130 54.6
Sp5g27360 Schrenkiella parvula HOM05D007344 ORTHO05D009010 9.7e-28 127.5 141 54.6
AT1G72290 Arabidopsis thaliana HOM05D007344 ORTHO05D009010 2.6e-25 119.4 113 54.9
A02p17920 Brassica napus HOM05D007344 ORTHO05D009010 8.5e-24 114.4 140 47.9
BraA02t06839Z Brassica rapa HOM05D007344 ORTHO05D009010 8.5e-24 114.4 140 47.9
BolC2t09025H Brassica oleracea HOM05D007344 ORTHO05D009010 1.9e-23 113.2 140 47.9
CARHR065180 Cardamine hirsuta HOM05D007344 ORTHO05D009010 1.9e-23 113.2 144 47.9
AL2G31960 Arabidopsis lyrata HOM05D007344 ORTHO05D009010 4.2e-23 112.1 123 52.0
A02p17860 Brassica napus HOM05D007344 ORTHO05D009010 4.2e-23 112.1 141 48.2
BraA02t06836Z Brassica rapa HOM05D007344 ORTHO05D009010 4.2e-23 112.1 141 48.2
BcaB05g24743 Brassica carinata HOM05D007344 ORTHO05D009010 5.5e-23 111.7 124 50.8
BcaB05g24739 Brassica carinata HOM05D007344 ORTHO05D009010 7.2e-23 111.3 141 46.8
BcaB05g24740 Brassica carinata HOM05D007344 ORTHO05D009010 9.4e-23 110.9 124 51.6
C02p29790 Brassica napus HOM05D007344 ORTHO05D009010 9.4e-23 110.9 121 52.1
Thhalv10019095m.g Eutrema salsugineum HOM05D007344 ORTHO05D009010 9.4e-23 110.9 126 52.4
C02p29770 Brassica napus HOM05D007344 ORTHO05D009010 1.2e-22 110.5 140 47.1
CARHR065170 Cardamine hirsuta HOM05D007344 ORTHO05D009010 1.6e-22 110.2 151 44.4
BcaC03g15365 Brassica carinata HOM05D007344 ORTHO05D009010 4.7e-22 108.6 141 46.8
BcaC03g15366 Brassica carinata HOM05D007344 ORTHO05D009010 4.7e-22 108.6 141 46.8
C02p29730 Brassica napus HOM05D007344 ORTHO05D009010 4.7e-22 108.6 141 46.8
C02p29750 Brassica napus HOM05D007344 ORTHO05D009010 4.7e-22 108.6 141 46.8
C06p46460 Brassica napus HOM05D007344 ORTHO05D009010 4.7e-22 108.6 141 46.8
BolC2t09022H Brassica oleracea HOM05D007344 ORTHO05D009010 4.7e-22 108.6 141 46.8
BolC6t39698H Brassica oleracea HOM05D007344 ORTHO05D009010 4.7e-22 108.6 141 47.5
BcaB03g14972 Brassica carinata HOM05D007344 ORTHO05D009010 6.1e-22 108.2 141 46.8
BcaB03g14974 Brassica carinata HOM05D007344 ORTHO05D009010 6.1e-22 108.2 141 46.8
BcaC03g15367 Brassica carinata HOM05D007344 ORTHO05D009010 6.1e-22 108.2 121 51.2
A07p38410 Brassica napus HOM05D007344 ORTHO05D009010 2.3e-21 106.3 149 44.3
BolC6t39693H Brassica oleracea HOM05D007344 ORTHO05D009010 2.3e-21 106.3 141 46.8
BraA07t31402Z Brassica rapa HOM05D007344 ORTHO05D009010 2.3e-21 106.3 149 44.3
BcaC03g15361 Brassica carinata HOM05D007344 ORTHO05D009010 5.2e-21 105.1 141 46.1
BcaC08g46676 Brassica carinata HOM05D007344 ORTHO05D009010 8.8e-21 104.4 141 46.1
C06p46520 Brassica napus HOM05D007344 ORTHO05D009010 8.8e-21 104.4 141 46.1
BcaB02g07012 Brassica carinata HOM05D007344 ORTHO05D009010 1.1e-20 104.0 141 45.4
BolC2t09020H Brassica oleracea HOM05D007344 ORTHO05D009010 1.5e-20 103.6 144 45.1
Carub.0002s1914 Capsella rubella HOM05D007344 ORTHO05D009010 2.0e-20 103.2 124 50.8
BolC6t39697H Brassica oleracea HOM05D007344 ORTHO05D009010 5.7e-20 101.7 141 45.4
Carub.0002s1909 Capsella rubella HOM05D007344 ORTHO05D009010 7.4e-20 101.3 126 50.0
BcaB03g14973 Brassica carinata HOM05D007344 ORTHO05D009010 8.2e-19 97.8 139 44.6
BolC6t39696H Brassica oleracea HOM05D007344 ORTHO05D009010 8.2e-19 97.8 139 43.2
A02p17890 Brassica napus HOM05D007344 ORTHO05D009010 1.1e-18 97.4 141 43.3
BraA02t06838Z Brassica rapa HOM05D007344 ORTHO05D009010 1.1e-18 97.4 141 43.3
CARHR065160 Cardamine hirsuta HOM05D007344 ORTHO05D009010 7.0e-18 94.7 140 42.9
BcaB05g24736 Brassica carinata HOM05D007344 ORTHO05D009010 1.3e-16 90.5 115 45.2
BcaB05g24737 Brassica carinata HOM05D007344 ORTHO05D009010 1.3e-16 90.5 115 45.2
Carub.0002s1912 Capsella rubella HOM05D007344 ORTHO05D009010 5.0e-16 88.6 132 46.2
BcaC08g46677 Brassica carinata HOM05D007344 ORTHO05D009010 5.5e-15 85.1 99 50.5
BraA07t31400Z Brassica rapa HOM05D007344 ORTHO05D009010 7.2e-15 84.7 149 38.3
BcaB03g14970 Brassica carinata HOM05D007344 ORTHO05D009010 2.7e-14 82.8 111 44.1
BcaC08g46673 Brassica carinata HOM05D007344 ORTHO05D009010 6.1e-14 81.6 149 38.9
C06p46430 Brassica napus HOM05D007344 ORTHO05D009010 6.1e-14 81.6 149 38.9
AL2G31970 Arabidopsis lyrata HOM05D007344 ORTHO05D009010 1.3e-11 73.9 85 44.7
BolC6t39707H Brassica oleracea HOM05D007344 ORTHO05D009010 1.7e-11 73.6 98 45.9
BcaC08g46675 Brassica carinata HOM05D007344 ORTHO05D009010 2.7e-09 66.2 83 48.2
C06p46510 Brassica napus HOM05D007344 ORTHO05D009010 2.7e-09 66.2 83 48.2
BcaC08g46682 Brassica carinata HOM05D007344 ORTHO05D009010 6.5e-08 61.6 88 38.6
BcaC08g46684 Brassica carinata HOM05D007344 ORTHO05D032659 1.6e-06 57.0 85 44.7
C06p46640 Brassica napus HOM05D007344 ORTHO05D032659 1.6e-06 57.0 85 44.7
BolC6t39709H Brassica oleracea HOM05D007344 ORTHO05D032659 1.6e-06 57.0 85 44.7
BcaC08g46680 Brassica carinata HOM05D007344 ORTHO05D009010 3.6e-06 55.8 67 49.3
C06p46560 Brassica napus HOM05D007344 ORTHO05D041415 3.6e-06 55.8 67 49.3
BolC6t39701H Brassica oleracea HOM05D007344 ORTHO05D041415 3.6e-06 55.8 67 49.3


User provided reference genes

Program Settings