Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p46530 Brassica napus HOM05D007344 ORTHO05D009010 2.7e-67 258.5 124 100.0
BolC6t39698H Brassica oleracea HOM05D007344 ORTHO05D009010 6.7e-50 200.7 104 94.2
BcaB03g14972 Brassica carinata HOM05D007344 ORTHO05D009010 2.3e-34 149.1 104 75.0
BcaB03g14974 Brassica carinata HOM05D007344 ORTHO05D009010 2.3e-34 149.1 104 75.0
BolC6t39693H Brassica oleracea HOM05D007344 ORTHO05D009010 2.3e-34 149.1 103 74.8
BcaC08g46677 Brassica carinata HOM05D007344 ORTHO05D009010 3.0e-34 148.7 70 98.6
C06p46460 Brassica napus HOM05D007344 ORTHO05D009010 2.0e-33 146.0 103 72.8
A07p38410 Brassica napus HOM05D007344 ORTHO05D009010 9.7e-33 143.7 95 72.6
BraA07t31402Z Brassica rapa HOM05D007344 ORTHO05D009010 9.7e-33 143.7 95 72.6
Sp5g27360 Schrenkiella parvula HOM05D007344 ORTHO05D009010 9.7e-33 143.7 97 71.1
BcaB02g07012 Brassica carinata HOM05D007344 ORTHO05D009010 1.3e-32 143.3 103 70.9
BcaB03g14973 Brassica carinata HOM05D007344 ORTHO05D009010 2.8e-32 142.1 101 72.3
BcaC08g46676 Brassica carinata HOM05D007344 ORTHO05D009010 2.4e-31 139.0 97 72.2
C06p46520 Brassica napus HOM05D007344 ORTHO05D009010 2.4e-31 139.0 97 72.2
BolC6t39697H Brassica oleracea HOM05D007344 ORTHO05D009010 2.4e-31 139.0 97 72.2
Carub.0002s1914 Capsella rubella HOM05D007344 ORTHO05D009010 3.2e-28 128.6 97 66.0
AT1G72290 Arabidopsis thaliana HOM05D007344 ORTHO05D009010 5.5e-28 127.9 79 77.2
Thhalv10019095m.g Eutrema salsugineum HOM05D007344 ORTHO05D009010 4.7e-27 124.8 80 76.2
Carub.0002s1910 Capsella rubella HOM05D007344 ORTHO05D009010 5.2e-26 121.3 79 73.4
AL2G31960 Arabidopsis lyrata HOM05D007344 ORTHO05D009010 1.1e-25 120.2 78 73.1
BolC6t39696H Brassica oleracea HOM05D007344 ORTHO05D009010 1.1e-25 120.2 89 67.4
BcaC08g46673 Brassica carinata HOM05D007344 ORTHO05D009010 7.5e-25 117.5 96 64.6
C06p46430 Brassica napus HOM05D007344 ORTHO05D009010 7.5e-25 117.5 96 64.6
BcaB03g14970 Brassica carinata HOM05D007344 ORTHO05D009010 1.3e-24 116.7 97 63.9
C02p29770 Brassica napus HOM05D007344 ORTHO05D009010 3.7e-24 115.2 103 56.3
BolC2t09025H Brassica oleracea HOM05D007344 ORTHO05D009010 3.7e-24 115.2 103 56.3
BcaB05g24743 Brassica carinata HOM05D007344 ORTHO05D009010 6.3e-24 114.4 103 55.3
BcaB05g24740 Brassica carinata HOM05D007344 ORTHO05D009010 8.2e-24 114.0 103 56.3
A02p17920 Brassica napus HOM05D007344 ORTHO05D009010 3.1e-23 112.1 103 53.4
BolC6t39691H Brassica oleracea HOM05D007344 ORTHO05D009010 3.1e-23 112.1 105 57.1
BraA02t06839Z Brassica rapa HOM05D007344 ORTHO05D009010 3.1e-23 112.1 103 53.4
BraA07t31400Z Brassica rapa HOM05D007344 ORTHO05D009010 9.1e-23 110.5 96 61.5
Carub.0002s1912 Capsella rubella HOM05D007344 ORTHO05D009010 5.9e-22 107.8 82 65.9
BcaB03g14976 Brassica carinata HOM05D007344 ORTHO05D009010 8.5e-21 104.0 100 56.0
BolC6t39694H Brassica oleracea HOM05D007344 ORTHO05D009010 4.7e-19 98.2 104 54.8
CARHR065170 Cardamine hirsuta HOM05D007344 ORTHO05D009010 1.0e-18 97.1 98 53.1
Carub.0002s1909 Capsella rubella HOM05D007344 ORTHO05D009010 1.8e-18 96.3 97 53.6
BolC6t39707H Brassica oleracea HOM05D007344 ORTHO05D009010 3.0e-18 95.5 71 66.2
BraA07t31405Z Brassica rapa HOM05D007344 ORTHO05D009010 8.8e-18 94.0 86 58.1
BcaC08g46679 Brassica carinata HOM05D007344 ORTHO05D009010 2.0e-17 92.8 84 56.0
C06p46550 Brassica napus HOM05D007344 ORTHO05D009010 2.0e-17 92.8 84 56.0
BolC6t39700H Brassica oleracea HOM05D007344 ORTHO05D009010 2.0e-17 92.8 84 56.0
BcaC08g46682 Brassica carinata HOM05D007344 ORTHO05D009010 2.6e-17 92.4 71 63.4
BcaC03g15361 Brassica carinata HOM05D007344 ORTHO05D009010 3.4e-17 92.0 87 49.4
A07p38440 Brassica napus HOM05D007344 ORTHO05D009010 3.4e-17 92.0 84 58.3
AL2G31970 Arabidopsis lyrata HOM05D007344 ORTHO05D009010 4.4e-17 91.7 74 62.2
A09p37590 Brassica napus HOM05D007344 ORTHO05D009010 5.7e-17 91.3 101 47.5
BcaC08g46678 Brassica carinata HOM05D007344 ORTHO05D009010 7.5e-17 90.9 101 51.5
C06p46540 Brassica napus HOM05D007344 ORTHO05D009010 7.5e-17 90.9 101 51.5
BolC6t39699H Brassica oleracea HOM05D007344 ORTHO05D009010 7.5e-17 90.9 101 51.5
BcaB03g14975 Brassica carinata HOM05D007344 ORTHO05D009010 1.7e-16 89.7 121 45.5
BcaC05g26866 Brassica carinata HOM05D007344 ORTHO05D009010 2.2e-16 89.4 102 46.1
BraA09t39269Z Brassica rapa HOM05D007344 ORTHO05D009010 2.8e-16 89.0 101 46.5
BcaB05g24739 Brassica carinata HOM05D007344 ORTHO05D009010 4.8e-16 88.2 88 51.1
A02p17860 Brassica napus HOM05D007344 ORTHO05D009010 8.3e-16 87.4 87 49.4
C05p27460 Brassica napus HOM05D007344 ORTHO05D009010 8.3e-16 87.4 102 44.1
BolC5t31464H Brassica oleracea HOM05D007344 ORTHO05D009010 8.3e-16 87.4 102 44.1
BraA02t06836Z Brassica rapa HOM05D007344 ORTHO05D009010 8.3e-16 87.4 87 49.4
BcaB07g32467 Brassica carinata HOM05D007344 ORTHO05D009010 1.4e-15 86.7 101 46.5
BcaC03g15366 Brassica carinata HOM05D007344 ORTHO05D009010 1.8e-15 86.3 87 49.4
C02p29750 Brassica napus HOM05D007344 ORTHO05D009010 1.8e-15 86.3 87 49.4
A07p38420 Brassica napus HOM05D007344 ORTHO05D009010 3.1e-15 85.5 101 49.5
BraA07t31403Z Brassica rapa HOM05D007344 ORTHO05D009010 3.1e-15 85.5 101 49.5
CARHR065160 Cardamine hirsuta HOM05D007344 ORTHO05D009010 1.6e-14 83.2 96 46.9
Aa31LG6G10960 Aethionema arabicum HOM05D007344 ORTHO05D009010 2.0e-14 82.8 76 51.3
A02p17890 Brassica napus HOM05D007344 ORTHO05D009010 4.5e-14 81.6 83 45.8
BraA02t06838Z Brassica rapa HOM05D007344 ORTHO05D009010 4.5e-14 81.6 83 45.8
CARHR065180 Cardamine hirsuta HOM05D007344 ORTHO05D009010 4.5e-14 81.6 84 48.8
BolC2t09022H Brassica oleracea HOM05D007344 ORTHO05D009010 5.9e-14 81.3 83 48.2
BcaC06g35373 Brassica carinata HOM05D007344 ORTHO05D009010 1.7e-13 79.7 82 47.6
C06p46590 Brassica napus HOM05D007344 ORTHO05D009010 1.7e-13 79.7 87 52.9
C07p16850 Brassica napus HOM05D007344 ORTHO05D009010 1.7e-13 79.7 82 47.6
BolC6t39705H Brassica oleracea HOM05D007344 ORTHO05D009010 1.7e-13 79.7 87 52.9
BolC7t42191H Brassica oleracea HOM05D007344 ORTHO05D009010 2.9e-13 79.0 81 48.1
BcaB05g24737 Brassica carinata HOM05D007344 ORTHO05D009010 5.0e-13 78.2 78 50.0
A07p11180 Brassica napus HOM05D007344 ORTHO05D009010 6.5e-13 77.8 84 50.0
BraA07t28908Z Brassica rapa HOM05D007344 ORTHO05D009010 6.5e-13 77.8 84 50.0
THA.LOC104812280 Tarenaya hassleriana HOM05D007344 ORTHO05D009010 8.5e-13 77.4 105 46.7
BcaC03g15365 Brassica carinata HOM05D007344 ORTHO05D009010 1.5e-12 76.6 83 47.0
C02p29730 Brassica napus HOM05D007344 ORTHO05D009010 1.5e-12 76.6 83 47.0
Aa31sc276G90 Aethionema arabicum HOM05D007344 ORTHO05D009010 1.9e-12 76.3 101 42.6
CARHR027960 Cardamine hirsuta HOM05D007344 ORTHO05D009010 1.9e-12 76.3 105 43.8
BcaC08g46684 Brassica carinata HOM05D007344 ORTHO05D032659 4.2e-12 75.1 50 72.0
C06p46640 Brassica napus HOM05D007344 ORTHO05D032659 4.2e-12 75.1 50 72.0
BolC6t39709H Brassica oleracea HOM05D007344 ORTHO05D032659 4.2e-12 75.1 50 72.0
BcaB05g24736 Brassica carinata HOM05D007344 ORTHO05D009010 7.2e-12 74.3 78 50.0
THA.LOC104813298 Tarenaya hassleriana HOM05D007344 ORTHO05D009010 9.4e-12 73.9 98 41.8
THA.LOC104814041 Tarenaya hassleriana HOM05D000535 ORTHO05D009010 3.6e-11 72.0 81 49.4
C06p46470 Brassica napus HOM05D007344 ORTHO05D009010 1.8e-10 69.7 96 46.9
Thhalv10009709m.g Eutrema salsugineum HOM05D007344 ORTHO05D009010 1.8e-10 69.7 84 50.0
Aa31LG6G10970 Aethionema arabicum HOM05D007344 ORTHO05D009010 2.3e-10 69.3 81 43.2
A07p38390 Brassica napus HOM05D007344 ORTHO05D009010 1.2e-09 67.0 96 43.8
THA.LOC104813935 Tarenaya hassleriana HOM05D000535 ORTHO05D009010 7.5e-09 64.3 66 45.5
Sp1g24730 Schrenkiella parvula HOM05D007344 ORTHO05D009010 3.7e-08 62.0 64 50.0
THA.LOC104814040 Tarenaya hassleriana HOM05D000535 ORTHO05D009010 4.9e-08 61.6 63 47.6
BolC2t09020H Brassica oleracea HOM05D007344 ORTHO05D009010 2.4e-07 59.3 58 48.3
C06p46620 Brassica napus HOM05D007344 ORTHO05D009010 7.7e-06 54.3 35 71.4


User provided reference genes

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