Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g46675 Brassica carinata HOM05D007344 ORTHO05D009010 8.2e-42 173.3 89 100.0
C06p46510 Brassica napus HOM05D007344 ORTHO05D009010 8.2e-42 173.3 89 100.0
BcaB02g07012 Brassica carinata HOM05D007344 ORTHO05D009010 5.7e-35 150.6 89 85.4
BolC6t39697H Brassica oleracea HOM05D007344 ORTHO05D009010 1.8e-33 145.6 89 82.0
BcaB03g14973 Brassica carinata HOM05D007344 ORTHO05D009010 2.4e-33 145.2 89 82.0
A07p38410 Brassica napus HOM05D007344 ORTHO05D009010 3.1e-33 144.8 90 83.3
BolC6t39693H Brassica oleracea HOM05D007344 ORTHO05D009010 3.1e-33 144.8 89 80.9
BraA07t31402Z Brassica rapa HOM05D007344 ORTHO05D009010 3.1e-33 144.8 90 83.3
BcaC08g46676 Brassica carinata HOM05D007344 ORTHO05D009010 2.6e-32 141.7 89 79.8
C06p46520 Brassica napus HOM05D007344 ORTHO05D009010 2.6e-32 141.7 89 79.8
C06p46460 Brassica napus HOM05D007344 ORTHO05D009010 1.5e-30 136.0 89 78.7
BcaB03g14972 Brassica carinata HOM05D007344 ORTHO05D009010 6.1e-29 130.6 89 74.2
BcaB03g14974 Brassica carinata HOM05D007344 ORTHO05D009010 6.1e-29 130.6 89 74.2
BcaC08g46677 Brassica carinata HOM05D007344 ORTHO05D009010 6.1e-29 130.6 90 75.6
BolC6t39698H Brassica oleracea HOM05D007344 ORTHO05D009010 6.1e-29 130.6 90 75.6
BolC6t39696H Brassica oleracea HOM05D007344 ORTHO05D009010 5.2e-28 127.5 78 84.6
BraA07t31400Z Brassica rapa HOM05D007344 ORTHO05D009010 4.1e-25 117.9 91 72.5
Sp5g27360 Schrenkiella parvula HOM05D007344 ORTHO05D009010 2.0e-24 115.5 92 67.4
BcaC08g46673 Brassica carinata HOM05D007344 ORTHO05D009010 3.8e-23 111.3 90 70.0
C06p46430 Brassica napus HOM05D007344 ORTHO05D009010 3.8e-23 111.3 90 70.0
Carub.0002s1910 Capsella rubella HOM05D007344 ORTHO05D009010 3.2e-22 108.2 92 63.0
Thhalv10019095m.g Eutrema salsugineum HOM05D007344 ORTHO05D009010 1.4e-20 102.8 92 63.0
BcaB03g14970 Brassica carinata HOM05D007344 ORTHO05D009010 3.0e-20 101.7 75 70.7
BcaB05g24739 Brassica carinata HOM05D007344 ORTHO05D009010 1.2e-19 99.8 92 55.4
BcaB03g14976 Brassica carinata HOM05D007344 ORTHO05D009010 2.6e-19 98.6 90 58.9
AL2G31960 Arabidopsis lyrata HOM05D007344 ORTHO05D009010 3.4e-19 98.2 90 60.0
A02p17860 Brassica napus HOM05D007344 ORTHO05D009010 7.5e-19 97.1 92 59.8
BraA02t06836Z Brassica rapa HOM05D007344 ORTHO05D009010 7.5e-19 97.1 92 59.8
Carub.0002s1914 Capsella rubella HOM05D007344 ORTHO05D009010 1.7e-18 95.9 89 61.8
BcaC03g15365 Brassica carinata HOM05D007344 ORTHO05D009010 1.4e-17 92.8 92 56.5
BcaC03g15366 Brassica carinata HOM05D007344 ORTHO05D009010 1.4e-17 92.8 92 56.5
C02p29730 Brassica napus HOM05D007344 ORTHO05D009010 1.4e-17 92.8 92 56.5
C02p29750 Brassica napus HOM05D007344 ORTHO05D009010 1.4e-17 92.8 92 56.5
BolC2t09020H Brassica oleracea HOM05D007344 ORTHO05D009010 1.4e-17 92.8 92 56.5
BolC2t09022H Brassica oleracea HOM05D007344 ORTHO05D009010 1.4e-17 92.8 92 56.5
BcaC03g15361 Brassica carinata HOM05D007344 ORTHO05D009010 1.8e-17 92.4 90 60.0
BcaC08g46680 Brassica carinata HOM05D007344 ORTHO05D009010 9.1e-17 90.1 61 72.1
C06p46560 Brassica napus HOM05D007344 ORTHO05D041415 9.1e-17 90.1 61 72.1
BolC6t39701H Brassica oleracea HOM05D007344 ORTHO05D041415 9.1e-17 90.1 61 72.1
BolC6t39707H Brassica oleracea HOM05D007344 ORTHO05D009010 2.7e-16 88.6 81 59.3
Carub.0002s1912 Capsella rubella HOM05D007344 ORTHO05D009010 2.7e-16 88.6 90 57.8
Carub.0002s1909 Capsella rubella HOM05D007344 ORTHO05D009010 4.5e-16 87.8 92 57.6
A02p17890 Brassica napus HOM05D007344 ORTHO05D009010 1.0e-15 86.7 92 55.4
BraA02t06838Z Brassica rapa HOM05D007344 ORTHO05D009010 1.0e-15 86.7 92 55.4
C06p46470 Brassica napus HOM05D007344 ORTHO05D009010 1.3e-15 86.3 64 76.6
BolC6t39694H Brassica oleracea HOM05D007344 ORTHO05D009010 1.3e-15 86.3 64 76.6
CARHR065180 Cardamine hirsuta HOM05D007344 ORTHO05D009010 5.0e-15 84.3 90 55.6
BolC6t39691H Brassica oleracea HOM05D007344 ORTHO05D009010 8.6e-15 83.6 64 75.0
BcaB05g24740 Brassica carinata HOM05D007344 ORTHO05D009010 2.5e-14 82.0 90 54.4
C06p46590 Brassica napus HOM05D007344 ORTHO05D009010 2.5e-14 82.0 94 51.1
BolC6t39705H Brassica oleracea HOM05D007344 ORTHO05D009010 2.5e-14 82.0 94 51.1
BcaB05g24743 Brassica carinata HOM05D007344 ORTHO05D009010 3.3e-14 81.6 90 54.4
A02p17920 Brassica napus HOM05D007344 ORTHO05D009010 5.5e-14 80.9 90 54.4
A07p38390 Brassica napus HOM05D007344 ORTHO05D009010 5.5e-14 80.9 64 73.4
BraA02t06839Z Brassica rapa HOM05D007344 ORTHO05D009010 5.5e-14 80.9 90 54.4
BcaB05g24736 Brassica carinata HOM05D007344 ORTHO05D009010 2.1e-13 79.0 92 52.2
BcaB05g24737 Brassica carinata HOM05D007344 ORTHO05D009010 2.1e-13 79.0 92 52.2
BcaC08g46684 Brassica carinata HOM05D007344 ORTHO05D032659 2.1e-13 79.0 71 60.6
C06p46640 Brassica napus HOM05D007344 ORTHO05D032659 2.1e-13 79.0 71 60.6
BolC6t39709H Brassica oleracea HOM05D007344 ORTHO05D032659 2.1e-13 79.0 71 60.6
BcaC03g15367 Brassica carinata HOM05D007344 ORTHO05D009010 2.8e-13 78.6 90 53.3
C02p29770 Brassica napus HOM05D007344 ORTHO05D009010 2.8e-13 78.6 90 53.3
BolC2t09025H Brassica oleracea HOM05D007344 ORTHO05D009010 2.8e-13 78.6 90 53.3
C02p29790 Brassica napus HOM05D007344 ORTHO05D009010 8.0e-13 77.0 90 52.2
CARHR065170 Cardamine hirsuta HOM05D007344 ORTHO05D009010 6.8e-12 73.9 90 53.3
BcaC08g46679 Brassica carinata HOM05D007344 ORTHO05D009010 1.3e-10 69.7 86 48.8
C06p46550 Brassica napus HOM05D007344 ORTHO05D009010 1.3e-10 69.7 86 48.8
BolC6t39700H Brassica oleracea HOM05D007344 ORTHO05D009010 1.3e-10 69.7 86 48.8
A07p38420 Brassica napus HOM05D007344 ORTHO05D009010 1.7e-10 69.3 82 47.6
BraA07t31403Z Brassica rapa HOM05D007344 ORTHO05D009010 1.7e-10 69.3 82 47.6
BcaC08g46678 Brassica carinata HOM05D007344 ORTHO05D009010 2.8e-10 68.6 82 47.6
C06p46540 Brassica napus HOM05D007344 ORTHO05D009010 2.8e-10 68.6 82 47.6
BolC6t39699H Brassica oleracea HOM05D007344 ORTHO05D009010 2.8e-10 68.6 82 47.6
AT1G72290 Arabidopsis thaliana HOM05D007344 ORTHO05D009010 1.1e-09 66.6 80 50.0
BcaB03g14975 Brassica carinata HOM05D007344 ORTHO05D009010 1.1e-09 66.6 86 47.7
BcaC08g46681 Brassica carinata HOM05D007344 ORTHO05D032082 1.1e-09 66.6 83 48.2
A07p38440 Brassica napus HOM05D007344 ORTHO05D009010 1.1e-09 66.6 86 46.5
C06p46580 Brassica napus HOM05D007344 ORTHO05D032082 1.1e-09 66.6 83 48.2
BolC6t39703H Brassica oleracea HOM05D007344 ORTHO05D032082 1.1e-09 66.6 83 48.2
BraA07t31405Z Brassica rapa HOM05D007344 ORTHO05D009010 1.1e-09 66.6 86 46.5
CARHR065160 Cardamine hirsuta HOM05D007344 ORTHO05D009010 7.0e-09 63.9 87 42.5


User provided reference genes

Program Settings