Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p46460 Brassica napus HOM05D007344 ORTHO05D009010 3.4e-121 438.3 219 100.0
BolC6t39693H Brassica oleracea HOM05D007344 ORTHO05D009010 8.9e-114 413.7 219 93.6
BolC6t39697H Brassica oleracea HOM05D007344 ORTHO05D009010 8.1e-107 390.6 217 89.9
BcaC08g46676 Brassica carinata HOM05D007344 ORTHO05D009010 1.8e-106 389.4 217 89.4
C06p46520 Brassica napus HOM05D007344 ORTHO05D009010 1.8e-106 389.4 217 89.4
A07p38410 Brassica napus HOM05D007344 ORTHO05D009010 2.9e-104 382.1 218 88.1
BraA07t31402Z Brassica rapa HOM05D007344 ORTHO05D009010 2.9e-104 382.1 218 88.1
BcaB02g07012 Brassica carinata HOM05D007344 ORTHO05D009010 9.2e-103 377.1 219 83.6
BcaB03g14973 Brassica carinata HOM05D007344 ORTHO05D009010 6.0e-102 374.4 219 83.6
BcaB03g14972 Brassica carinata HOM05D007344 ORTHO05D009010 7.6e-97 357.5 223 82.1
BcaB03g14974 Brassica carinata HOM05D007344 ORTHO05D009010 7.6e-97 357.5 223 82.1
BolC6t39696H Brassica oleracea HOM05D007344 ORTHO05D009010 1.0e-85 320.5 195 80.5
BolC6t39698H Brassica oleracea HOM05D007344 ORTHO05D009010 2.3e-85 319.3 224 75.4
Sp5g27360 Schrenkiella parvula HOM05D007344 ORTHO05D009010 4.8e-83 311.6 221 72.9
Carub.0002s1910 Capsella rubella HOM05D007344 ORTHO05D009010 6.2e-75 284.6 224 67.9
BcaB03g14970 Brassica carinata HOM05D007344 ORTHO05D009010 2.0e-73 279.6 213 69.5
Carub.0002s1914 Capsella rubella HOM05D007344 ORTHO05D009010 3.5e-70 268.9 218 66.5
Thhalv10019095m.g Eutrema salsugineum HOM05D007344 ORTHO05D009010 3.0e-69 265.8 223 66.4
AL2G31960 Arabidopsis lyrata HOM05D007344 ORTHO05D009010 6.2e-67 258.1 220 63.2
BcaC08g46673 Brassica carinata HOM05D007344 ORTHO05D009010 1.4e-66 256.9 221 66.1
C06p46430 Brassica napus HOM05D007344 ORTHO05D009010 1.4e-66 256.9 221 66.1
BraA07t31400Z Brassica rapa HOM05D007344 ORTHO05D009010 6.9e-66 254.6 222 65.8
BcaC08g46677 Brassica carinata HOM05D007344 ORTHO05D009010 4.5e-65 251.9 213 64.8
AT1G72290 Arabidopsis thaliana HOM05D007344 ORTHO05D009010 8.4e-64 247.7 209 63.2
BcaB05g24739 Brassica carinata HOM05D007344 ORTHO05D009010 9.3e-63 244.2 221 56.6
BcaC03g15361 Brassica carinata HOM05D007344 ORTHO05D009010 5.7e-60 235.0 218 56.4
A02p17860 Brassica napus HOM05D007344 ORTHO05D009010 5.7e-60 235.0 220 56.8
BraA02t06836Z Brassica rapa HOM05D007344 ORTHO05D009010 5.7e-60 235.0 220 56.8
BcaB03g14976 Brassica carinata HOM05D007344 ORTHO05D009010 1.3e-59 233.8 222 58.6
CARHR065170 Cardamine hirsuta HOM05D007344 ORTHO05D009010 5.3e-58 228.4 217 59.0
BcaC03g15366 Brassica carinata HOM05D007344 ORTHO05D009010 2.0e-57 226.5 220 54.5
C02p29750 Brassica napus HOM05D007344 ORTHO05D009010 2.0e-57 226.5 220 54.5
Carub.0002s1909 Capsella rubella HOM05D007344 ORTHO05D009010 2.0e-57 226.5 223 58.3
BcaB05g24743 Brassica carinata HOM05D007344 ORTHO05D009010 2.9e-56 222.6 225 56.0
BcaB05g24740 Brassica carinata HOM05D007344 ORTHO05D009010 6.5e-56 221.5 225 56.4
BolC2t09022H Brassica oleracea HOM05D007344 ORTHO05D009010 5.5e-55 218.4 215 54.0
A02p17920 Brassica napus HOM05D007344 ORTHO05D009010 1.0e-53 214.2 224 54.9
BraA02t06839Z Brassica rapa HOM05D007344 ORTHO05D009010 1.0e-53 214.2 224 54.9
BcaC03g15365 Brassica carinata HOM05D007344 ORTHO05D009010 1.3e-53 213.8 215 53.5
C02p29730 Brassica napus HOM05D007344 ORTHO05D009010 1.3e-53 213.8 215 53.5
A02p17890 Brassica napus HOM05D007344 ORTHO05D009010 2.3e-53 213.0 215 52.6
BraA02t06838Z Brassica rapa HOM05D007344 ORTHO05D009010 2.3e-53 213.0 215 52.6
BolC2t09025H Brassica oleracea HOM05D007344 ORTHO05D009010 1.1e-52 210.7 224 54.9
BcaB05g24737 Brassica carinata HOM05D007344 ORTHO05D009010 5.7e-52 208.4 219 51.6
C02p29770 Brassica napus HOM05D007344 ORTHO05D009010 7.4e-52 208.0 224 54.5
BcaB05g24736 Brassica carinata HOM05D007344 ORTHO05D009010 8.2e-51 204.5 219 51.6
Carub.0002s1912 Capsella rubella HOM05D007344 ORTHO05D009010 5.9e-49 198.4 229 53.3
CARHR065180 Cardamine hirsuta HOM05D007344 ORTHO05D009010 1.7e-48 196.8 220 54.5
BcaC08g46679 Brassica carinata HOM05D007344 ORTHO05D009010 1.1e-47 194.1 219 53.4
C06p46550 Brassica napus HOM05D007344 ORTHO05D009010 1.1e-47 194.1 219 53.4
BolC6t39700H Brassica oleracea HOM05D007344 ORTHO05D009010 1.1e-47 194.1 219 53.4
BolC2t09020H Brassica oleracea HOM05D007344 ORTHO05D009010 6.1e-46 188.3 190 53.7
BraA07t31405Z Brassica rapa HOM05D007344 ORTHO05D009010 6.1e-46 188.3 219 51.6
A07p38440 Brassica napus HOM05D007344 ORTHO05D009010 3.9e-45 185.7 218 51.4
CARHR065160 Cardamine hirsuta HOM05D007344 ORTHO05D009010 1.1e-44 184.1 215 49.3
BolC6t39707H Brassica oleracea HOM05D007344 ORTHO05D009010 4.4e-44 182.2 210 51.4
C06p46590 Brassica napus HOM05D007344 ORTHO05D009010 2.4e-42 176.4 223 50.7
BolC6t39705H Brassica oleracea HOM05D007344 ORTHO05D009010 2.4e-42 176.4 223 50.7
BolC6t39691H Brassica oleracea HOM05D007344 ORTHO05D009010 1.0e-40 171.0 220 50.9
BcaC08g46682 Brassica carinata HOM05D007344 ORTHO05D009010 3.8e-40 169.1 166 55.4
BcaB03g14975 Brassica carinata HOM05D007344 ORTHO05D009010 6.5e-40 168.3 217 48.4
BolC6t39694H Brassica oleracea HOM05D007344 ORTHO05D009010 4.2e-39 165.6 228 48.7
BcaC08g46678 Brassica carinata HOM05D007344 ORTHO05D009010 2.7e-38 162.9 214 46.7
C06p46540 Brassica napus HOM05D007344 ORTHO05D009010 2.7e-38 162.9 214 46.7
BolC6t39699H Brassica oleracea HOM05D007344 ORTHO05D009010 2.7e-38 162.9 214 46.7
A07p38420 Brassica napus HOM05D007344 ORTHO05D009010 5.2e-37 158.7 214 46.3
BraA07t31403Z Brassica rapa HOM05D007344 ORTHO05D009010 5.2e-37 158.7 214 46.3
AL2G31970 Arabidopsis lyrata HOM05D007344 ORTHO05D009010 8.8e-37 157.9 157 55.4
C06p46470 Brassica napus HOM05D007344 ORTHO05D009010 6.3e-35 151.8 217 49.3
C06p46530 Brassica napus HOM05D007344 ORTHO05D009010 1.3e-32 144.1 103 72.8
A07p38390 Brassica napus HOM05D007344 ORTHO05D009010 5.0e-32 142.1 217 46.1
BcaC08g46684 Brassica carinata HOM05D007344 ORTHO05D032659 1.5e-31 140.6 206 47.6
C06p46640 Brassica napus HOM05D007344 ORTHO05D032659 1.5e-31 140.6 206 47.6
BolC6t39709H Brassica oleracea HOM05D007344 ORTHO05D032659 1.5e-31 140.6 206 47.6
A09p37590 Brassica napus HOM05D007344 ORTHO05D009010 7.2e-31 138.3 228 42.1
BolC5t31464H Brassica oleracea HOM05D007344 ORTHO05D009010 9.4e-31 137.9 227 41.9
BcaC05g26866 Brassica carinata HOM05D007344 ORTHO05D009010 1.2e-30 137.5 226 42.9
BcaC08g46675 Brassica carinata HOM05D007344 ORTHO05D009010 1.2e-30 137.5 89 78.7
C06p46510 Brassica napus HOM05D007344 ORTHO05D009010 1.2e-30 137.5 89 78.7
BraA09t39269Z Brassica rapa HOM05D007344 ORTHO05D009010 2.7e-30 136.3 228 41.7
C05p27460 Brassica napus HOM05D007344 ORTHO05D009010 6.1e-30 135.2 236 40.3
BcaB07g32467 Brassica carinata HOM05D007344 ORTHO05D009010 8.0e-30 134.8 228 41.7
A07p11180 Brassica napus HOM05D007344 ORTHO05D009010 7.5e-28 128.3 206 41.7
BraA07t28908Z Brassica rapa HOM05D007344 ORTHO05D009010 7.5e-28 128.3 206 41.7
BcaC06g35373 Brassica carinata HOM05D007344 ORTHO05D009010 1.7e-27 127.1 204 40.2
C07p16850 Brassica napus HOM05D007344 ORTHO05D009010 1.7e-27 127.1 204 40.2
THA.LOC104813298 Tarenaya hassleriana HOM05D007344 ORTHO05D009010 2.8e-27 126.3 227 40.5
Aa31LG6G10960 Aethionema arabicum HOM05D007344 ORTHO05D009010 3.7e-27 125.9 227 41.0
BolC7t42191H Brassica oleracea HOM05D007344 ORTHO05D009010 3.7e-27 125.9 204 40.2
C02p29790 Brassica napus HOM05D007344 ORTHO05D009010 1.7e-24 117.1 129 55.0
CARHR027960 Cardamine hirsuta HOM05D007344 ORTHO05D009010 1.7e-24 117.1 228 38.6
BcaC03g15367 Brassica carinata HOM05D007344 ORTHO05D009010 3.8e-24 115.9 129 55.0
BcaC08g46680 Brassica carinata HOM05D007344 ORTHO05D009010 1.9e-23 113.6 78 74.4
Thhalv10009709m.g Eutrema salsugineum HOM05D007344 ORTHO05D009010 1.9e-23 113.6 159 46.5
C06p46560 Brassica napus HOM05D007344 ORTHO05D041415 2.7e-22 109.8 64 85.9
BolC6t39701H Brassica oleracea HOM05D007344 ORTHO05D041415 2.7e-22 109.8 64 85.9
BcaC08g46681 Brassica carinata HOM05D007344 ORTHO05D032082 3.6e-22 109.4 141 46.8
C06p46580 Brassica napus HOM05D007344 ORTHO05D032082 3.6e-22 109.4 141 46.8
BolC6t39703H Brassica oleracea HOM05D007344 ORTHO05D032082 3.6e-22 109.4 141 46.8
Aa31sc276G90 Aethionema arabicum HOM05D007344 ORTHO05D009010 1.8e-21 107.1 208 37.5
THA.LOC104814041 Tarenaya hassleriana HOM05D000535 ORTHO05D009010 9.8e-20 101.3 225 36.0
Aa31LG6G10970 Aethionema arabicum HOM05D007344 ORTHO05D009010 1.7e-19 100.5 200 40.5
THA.LOC104812280 Tarenaya hassleriana HOM05D007344 ORTHO05D009010 4.8e-19 99.0 128 51.6
C06p46620 Brassica napus HOM05D007344 ORTHO05D009010 1.8e-18 97.1 153 41.8
THA.LOC104814040 Tarenaya hassleriana HOM05D000535 ORTHO05D009010 3.1e-18 96.3 229 34.9
THA.LOC104812190 Tarenaya hassleriana HOM05D000535 ORTHO05D009010 5.5e-15 85.5 189 34.4
BolC6t39791H Brassica oleracea HOM05D000535 ORTHO05D009010 5.2e-13 79.0 162 35.2
BcaC08g46756 Brassica carinata HOM05D000535 ORTHO05D009010 6.8e-13 78.6 208 32.7
C06p47530 Brassica napus HOM05D000535 ORTHO05D009010 6.8e-13 78.6 207 33.3
Sp1g24730 Schrenkiella parvula HOM05D007344 ORTHO05D009010 1.4e-10 70.9 224 28.1
THA.LOC104812189 Tarenaya hassleriana HOM05D007344 ORTHO05D009010 1.8e-10 70.5 192 29.7
Psat0s2953g0120 Pisum sativum HOM05D000535 ORTHO05D000427 2.7e-09 66.6 159 35.8
Medtr6g059760 Medicago truncatula HOM05D000535 ORTHO05D000427 3.5e-09 66.2 144 38.9
Lj2g0028248 Lotus japonicus HOM05D000535 ORTHO05D000427 3.8e-08 62.8 214 31.8
Lalb_Chr01g0008701 Lupinus albus HOM05D000535 ORTHO05D000427 3.8e-08 62.8 158 36.7
Sabra04G0045700 Salix brachista HOM05D000535 ORTHO05D000427 5.6e-07 58.9 141 33.3
Oeu018758.1 Olea europaea HOM05D000535 ORTHO05D000427 7.3e-07 58.5 162 34.6
Medtr6g059680 Medicago truncatula HOM05D000535 ORTHO05D000427 1.2e-06 57.8 158 32.3
Oeu032705.1 Olea europaea HOM05D000535 ORTHO05D000427 2.1e-06 57.0 162 34.6
Psat1g112520 Pisum sativum HOM05D000535 ORTHO05D000427 3.6e-06 56.2 142 33.8
ECA233G0242 Erigeron canadensis HOM05D000535 ORTHO05D015640 4.7e-06 55.8 164 26.8
Lj5g0017298 Lotus japonicus HOM05D000535 ORTHO05D000427 4.7e-06 55.8 137 32.8
CANSAT56G4212 Cannabis sativa HOM05D000535 ORTHO05D000427 6.1e-06 55.5 151 29.8
Ca_25239_v3 Cicer arietinum L. HOM05D000535 ORTHO05D000427 6.1e-06 55.5 131 37.4
HanXRQChr06g0165011 Helianthus annuus HOM05D000535 ORTHO05D000427 6.1e-06 55.5 158 34.2
Thecc.05G198000 Theobroma cacao HOM05D000535 ORTHO05D000427 6.1e-06 55.5 153 29.4
Nitab4.5_0000477g0210 Nicotiana tabacum HOM05D000535 ORTHO05D000427 8.0e-06 55.1 131 30.5
TPR.G8847 Trifolium pratense HOM05D000535 ORTHO05D000427 8.0e-06 55.1 137 35.8


User provided reference genes

Program Settings