Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g46673 Brassica carinata HOM05D007344 ORTHO05D009010 6.9e-116 420.6 209 100.0
C06p46430 Brassica napus HOM05D007344 ORTHO05D009010 6.9e-116 420.6 209 100.0
BraA07t31400Z Brassica rapa HOM05D007344 ORTHO05D009010 5.7e-110 401.0 213 95.8
BcaB03g14970 Brassica carinata HOM05D007344 ORTHO05D009010 3.4e-86 322.0 201 81.1
BolC6t39691H Brassica oleracea HOM05D007344 ORTHO05D009010 1.1e-76 290.4 209 75.6
A07p38410 Brassica napus HOM05D007344 ORTHO05D009010 8.0e-72 274.2 228 67.1
BraA07t31402Z Brassica rapa HOM05D007344 ORTHO05D009010 8.0e-72 274.2 228 67.1
BolC6t39697H Brassica oleracea HOM05D007344 ORTHO05D009010 8.9e-71 270.8 227 67.4
BcaB02g07012 Brassica carinata HOM05D007344 ORTHO05D009010 2.6e-70 269.2 221 68.3
BcaC08g46676 Brassica carinata HOM05D007344 ORTHO05D009010 4.4e-70 268.5 227 67.0
C06p46520 Brassica napus HOM05D007344 ORTHO05D009010 4.4e-70 268.5 227 67.0
BcaB03g14973 Brassica carinata HOM05D007344 ORTHO05D009010 5.8e-70 268.1 221 66.5
BolC6t39698H Brassica oleracea HOM05D007344 ORTHO05D009010 2.2e-69 266.2 222 68.5
BolC6t39694H Brassica oleracea HOM05D007344 ORTHO05D009010 6.4e-69 264.6 219 69.9
BcaB03g14972 Brassica carinata HOM05D007344 ORTHO05D009010 2.4e-68 262.7 222 66.2
BcaB03g14974 Brassica carinata HOM05D007344 ORTHO05D009010 2.4e-68 262.7 222 66.2
Sp5g27360 Schrenkiella parvula HOM05D007344 ORTHO05D009010 4.1e-68 261.9 228 64.5
C06p46460 Brassica napus HOM05D007344 ORTHO05D009010 6.0e-67 258.1 221 66.1
BolC6t39693H Brassica oleracea HOM05D007344 ORTHO05D009010 1.0e-66 257.3 221 65.6
Carub.0002s1910 Capsella rubella HOM05D007344 ORTHO05D009010 4.0e-63 245.4 229 58.5
Thhalv10019095m.g Eutrema salsugineum HOM05D007344 ORTHO05D009010 2.0e-62 243.0 228 59.2
A07p38390 Brassica napus HOM05D007344 ORTHO05D009010 1.2e-59 233.8 209 64.6
Carub.0002s1914 Capsella rubella HOM05D007344 ORTHO05D009010 3.5e-59 232.3 225 58.7
AL2G31960 Arabidopsis lyrata HOM05D007344 ORTHO05D009010 1.0e-58 230.7 226 57.1
C06p46470 Brassica napus HOM05D007344 ORTHO05D009010 9.5e-57 224.2 211 64.0
BcaB03g14976 Brassica carinata HOM05D007344 ORTHO05D009010 1.2e-51 207.2 228 53.9
BolC6t39696H Brassica oleracea HOM05D007344 ORTHO05D009010 1.6e-51 206.8 198 57.6
BcaC08g46677 Brassica carinata HOM05D007344 ORTHO05D009010 3.5e-51 205.7 212 58.5
Carub.0002s1909 Capsella rubella HOM05D007344 ORTHO05D009010 4.6e-51 205.3 229 52.8
AT1G72290 Arabidopsis thaliana HOM05D007344 ORTHO05D009010 3.0e-50 202.6 213 53.5
CARHR065170 Cardamine hirsuta HOM05D007344 ORTHO05D009010 2.0e-46 189.9 218 50.5
BcaB05g24739 Brassica carinata HOM05D007344 ORTHO05D009010 4.4e-46 188.7 222 49.1
BcaC03g15361 Brassica carinata HOM05D007344 ORTHO05D009010 7.6e-46 188.0 220 49.1
BcaC03g15366 Brassica carinata HOM05D007344 ORTHO05D009010 2.4e-44 183.0 220 47.7
A02p17860 Brassica napus HOM05D007344 ORTHO05D009010 2.4e-44 183.0 222 47.7
C02p29750 Brassica napus HOM05D007344 ORTHO05D009010 2.4e-44 183.0 220 47.7
BraA02t06836Z Brassica rapa HOM05D007344 ORTHO05D009010 2.4e-44 183.0 222 47.7
BcaB05g24743 Brassica carinata HOM05D007344 ORTHO05D009010 1.2e-43 180.6 216 49.1
A02p17890 Brassica napus HOM05D007344 ORTHO05D009010 1.2e-43 180.6 212 47.6
BraA02t06838Z Brassica rapa HOM05D007344 ORTHO05D009010 1.2e-43 180.6 212 47.6
A02p17920 Brassica napus HOM05D007344 ORTHO05D009010 2.7e-43 179.5 215 47.4
BraA02t06839Z Brassica rapa HOM05D007344 ORTHO05D009010 2.7e-43 179.5 215 47.4
C02p29770 Brassica napus HOM05D007344 ORTHO05D009010 7.8e-43 177.9 215 47.4
BolC2t09025H Brassica oleracea HOM05D007344 ORTHO05D009010 7.8e-43 177.9 215 47.4
BcaB05g24740 Brassica carinata HOM05D007344 ORTHO05D009010 1.0e-42 177.6 216 48.6
Carub.0002s1912 Capsella rubella HOM05D007344 ORTHO05D009010 1.7e-42 176.8 232 48.3
BolC2t09022H Brassica oleracea HOM05D007344 ORTHO05D009010 3.3e-41 172.6 212 46.7
BcaC03g15365 Brassica carinata HOM05D007344 ORTHO05D009010 8.1e-40 167.9 212 46.2
C02p29730 Brassica napus HOM05D007344 ORTHO05D009010 8.1e-40 167.9 212 46.2
CARHR065180 Cardamine hirsuta HOM05D007344 ORTHO05D009010 9.0e-39 164.5 227 46.7
BolC2t09020H Brassica oleracea HOM05D007344 ORTHO05D009010 5.8e-38 161.8 186 48.9
BcaB05g24737 Brassica carinata HOM05D007344 ORTHO05D009010 1.6e-35 153.7 222 43.2
BcaB05g24736 Brassica carinata HOM05D007344 ORTHO05D009010 3.5e-35 152.5 221 43.4
BcaC08g46679 Brassica carinata HOM05D007344 ORTHO05D009010 6.0e-35 151.8 220 46.4
C06p46550 Brassica napus HOM05D007344 ORTHO05D009010 6.0e-35 151.8 220 46.4
BolC6t39700H Brassica oleracea HOM05D007344 ORTHO05D009010 6.0e-35 151.8 220 46.4
C06p46590 Brassica napus HOM05D007344 ORTHO05D009010 1.0e-34 151.0 224 47.3
BolC6t39705H Brassica oleracea HOM05D007344 ORTHO05D009010 1.0e-34 151.0 224 47.3
CARHR065160 Cardamine hirsuta HOM05D007344 ORTHO05D009010 1.3e-34 150.6 215 44.7
BcaC08g46684 Brassica carinata HOM05D007344 ORTHO05D032659 6.6e-34 148.3 209 49.3
A07p38440 Brassica napus HOM05D007344 ORTHO05D009010 6.6e-34 148.3 220 46.8
C06p46640 Brassica napus HOM05D007344 ORTHO05D032659 6.6e-34 148.3 209 49.3
BolC6t39709H Brassica oleracea HOM05D007344 ORTHO05D032659 6.6e-34 148.3 209 49.3
BcaC08g46682 Brassica carinata HOM05D007344 ORTHO05D009010 1.5e-33 147.1 174 49.4
BraA07t31405Z Brassica rapa HOM05D007344 ORTHO05D009010 3.3e-33 146.0 217 47.0
BcaC08g46678 Brassica carinata HOM05D007344 ORTHO05D009010 4.3e-33 145.6 214 43.9
C06p46540 Brassica napus HOM05D007344 ORTHO05D009010 4.3e-33 145.6 214 43.9
BolC6t39699H Brassica oleracea HOM05D007344 ORTHO05D009010 4.3e-33 145.6 214 43.9
BolC6t39707H Brassica oleracea HOM05D007344 ORTHO05D009010 2.1e-32 143.3 213 45.5
A07p38420 Brassica napus HOM05D007344 ORTHO05D009010 2.4e-31 139.8 214 43.0
BraA07t31403Z Brassica rapa HOM05D007344 ORTHO05D009010 2.4e-31 139.8 214 43.0
AL2G31970 Arabidopsis lyrata HOM05D007344 ORTHO05D009010 3.4e-30 136.0 167 49.7
BcaB03g14975 Brassica carinata HOM05D007344 ORTHO05D009010 2.2e-29 133.3 220 43.6
BolC5t31464H Brassica oleracea HOM05D007344 ORTHO05D009010 1.3e-24 117.5 222 38.7
BcaC05g26866 Brassica carinata HOM05D007344 ORTHO05D009010 2.1e-24 116.7 222 38.7
BraA09t39269Z Brassica rapa HOM05D007344 ORTHO05D009010 2.1e-24 116.7 227 38.8
A09p37590 Brassica napus HOM05D007344 ORTHO05D009010 2.8e-24 116.3 221 38.5
C06p46530 Brassica napus HOM05D007344 ORTHO05D009010 4.8e-24 115.5 96 64.6
BcaB07g32467 Brassica carinata HOM05D007344 ORTHO05D009010 1.4e-23 114.0 224 37.1
C05p27460 Brassica napus HOM05D007344 ORTHO05D009010 1.8e-23 113.6 232 37.9
BcaC08g46675 Brassica carinata HOM05D007344 ORTHO05D009010 4.0e-23 112.5 90 70.0
C06p46510 Brassica napus HOM05D007344 ORTHO05D009010 4.0e-23 112.5 90 70.0
Aa31LG6G10960 Aethionema arabicum HOM05D007344 ORTHO05D009010 9.0e-23 111.3 222 38.7
CARHR027960 Cardamine hirsuta HOM05D007344 ORTHO05D009010 1.9e-20 103.6 226 35.0
THA.LOC104813298 Tarenaya hassleriana HOM05D007344 ORTHO05D009010 3.0e-18 96.3 225 36.0
BcaC03g15367 Brassica carinata HOM05D007344 ORTHO05D009010 8.7e-18 94.7 124 50.0
C02p29790 Brassica napus HOM05D007344 ORTHO05D009010 2.5e-17 93.2 124 49.2
BolC7t42191H Brassica oleracea HOM05D007344 ORTHO05D009010 5.7e-17 92.0 218 34.9
BcaC06g35373 Brassica carinata HOM05D007344 ORTHO05D009010 9.6e-17 91.3 217 34.1
C07p16850 Brassica napus HOM05D007344 ORTHO05D009010 9.6e-17 91.3 217 34.1
A07p11180 Brassica napus HOM05D007344 ORTHO05D009010 1.3e-16 90.9 227 34.4
BraA07t28908Z Brassica rapa HOM05D007344 ORTHO05D009010 1.3e-16 90.9 227 34.4
Thhalv10009709m.g Eutrema salsugineum HOM05D007344 ORTHO05D009010 6.9e-15 85.1 168 36.9
THA.LOC104814040 Tarenaya hassleriana HOM05D000535 ORTHO05D009010 9.0e-15 84.7 227 33.5
THA.LOC104812280 Tarenaya hassleriana HOM05D007344 ORTHO05D009010 1.2e-14 84.3 126 39.7
BcaC08g46681 Brassica carinata HOM05D007344 ORTHO05D032082 1.0e-13 81.3 149 38.9
C06p46580 Brassica napus HOM05D007344 ORTHO05D032082 1.0e-13 81.3 149 38.9
BolC6t39703H Brassica oleracea HOM05D007344 ORTHO05D032082 1.3e-13 80.9 144 39.6
Aa31sc276G90 Aethionema arabicum HOM05D007344 ORTHO05D009010 3.8e-13 79.3 166 34.9
BcaB03g15050 Brassica carinata HOM05D000535 ORTHO05D000427 1.4e-12 77.4 213 32.4
Aa31LG6G10970 Aethionema arabicum HOM05D007344 ORTHO05D009010 2.5e-12 76.6 204 36.3
Aa31LG4G3590 Aethionema arabicum HOM05D000535 ORTHO05D009010 4.2e-12 75.9 201 31.8
BcaC08g46680 Brassica carinata HOM05D007344 ORTHO05D009010 2.3e-10 70.1 64 60.9
C06p46560 Brassica napus HOM05D007344 ORTHO05D041415 2.3e-10 70.1 64 60.9
BolC6t39701H Brassica oleracea HOM05D007344 ORTHO05D041415 2.3e-10 70.1 64 60.9
BolC6t39791H Brassica oleracea HOM05D000535 ORTHO05D009010 2.3e-10 70.1 209 30.1
BcaC08g46756 Brassica carinata HOM05D000535 ORTHO05D009010 3.0e-10 69.7 209 30.1
C06p47530 Brassica napus HOM05D000535 ORTHO05D009010 5.1e-10 68.9 209 30.1
A07p39300 Brassica napus HOM05D000535 ORTHO05D009010 1.1e-09 67.8 151 32.5
BraA07t31479Z Brassica rapa HOM05D000535 ORTHO05D009010 1.1e-09 67.8 151 32.5
Aa31LG4G14740 Aethionema arabicum HOM05D000535 ORTHO05D000427 2.4e-07 60.1 218 25.2
EL10Ac6g13199 Beta vulgaris HOM05D000535 ORTHO05D000427 2.4e-07 60.1 104 34.6
Lj2g0028248 Lotus japonicus HOM05D000535 ORTHO05D000427 2.4e-07 60.1 215 27.9
SalBow5G3210 Salvia bowleyana HOM05D000535 ORTHO05D000427 2.6e-06 56.6 138 35.5


User provided reference genes

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