Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p46300 Brassica napus HOM05D009671 ORTHO05D011859 1.9e-111 406.0 225 100.0
BraA07t31388Z Brassica rapa HOM05D009671 ORTHO05D011859 1.2e-92 343.6 245 84.1
BolC6t39675H Brassica oleracea HOM05D009671 ORTHO05D011859 1.4e-90 336.7 241 84.2
BcaC08g46659 Brassica carinata HOM05D009671 ORTHO05D011859 1.2e-86 323.6 226 86.3
A07p38220 Brassica napus HOM05D009671 ORTHO05D011859 5.1e-72 275.0 231 76.2
BcaB03g14934 Brassica carinata HOM05D009671 ORTHO05D011859 1.9e-26 123.6 98 79.6
Carub.0002s1885 Capsella rubella HOM05D009671 ORTHO05D011859 6.1e-25 118.6 98 81.6
AT1G72070 Arabidopsis thaliana HOM05D009671 ORTHO05D011859 6.7e-24 115.2 96 80.2
AL2G31690 Arabidopsis lyrata HOM05D009671 ORTHO05D011859 7.4e-23 111.7 91 76.9
BcaB03g15029 Brassica carinata HOM05D009671 ORTHO05D011859 1.7e-22 110.5 98 78.6
CARHR064890 Cardamine hirsuta HOM05D009671 ORTHO05D011859 8.2e-22 108.2 88 85.2
BcaC08g46736 Brassica carinata HOM05D009671 ORTHO05D011859 3.8e-19 99.4 63 79.4
Thecc.08G187900 Theobroma cacao HOM05D009671 ORTHO05D011859 3.9e-16 89.4 115 47.8
THA.LOC104800125 Tarenaya hassleriana HOM05D009671 ORTHO05D011859 1.3e-14 84.3 97 66.0
BcaB03g14940 Brassica carinata HOM05D009671 ORTHO05D011859 2.2e-14 83.6 95 72.6
Aqoxy6G00097 Aquilegia oxysepala HOM05D009671 ORTHO05D011859 2.8e-14 83.2 106 57.5
Hund16784 Selenicereus undatus HOM05D009671 ORTHO05D003854 4.8e-14 82.4 92 47.8
Sc23g0001430 Simmondsia chinensis HOM05D009671 ORTHO05D011859 6.3e-14 82.0 95 48.4
EL10Ac1g00117 Beta vulgaris HOM05D009671 ORTHO05D011859 8.2e-14 81.6 101 52.5
AUR62004618 Chenopodium quinoa HOM05D009671 ORTHO05D011859 1.8e-13 80.5 98 59.2
Ah.05g178420 Amaranthus hybridus HOM05D009671 ORTHO05D011859 4.1e-13 79.3 98 60.2
MBI06_g17234_MAGBIO Magnolia biondii HOM05D009671 ORTHO05D011859 3.5e-12 76.3 99 52.5
PSO782G1016 Papaver somniferum HOM05D009671 ORTHO05D011859 1.3e-11 74.3 98 59.2
CDE08G1624 Ceratophyllum demersum HOM05D009671 ORTHO05D011859 2.9e-11 73.2 88 68.2
CDE02G4762 Ceratophyllum demersum HOM05D009671 ORTHO05D011859 1.9e-10 70.5 88 56.8
SalBow1G8415 Salvia bowleyana HOM05D007032 ORTHO05D008777 6.7e-08 62.0 70 45.7
SEGI_25751 Sequoiadendron giganteum HOM05D003458 ORTHO05D003854 1.5e-07 60.8 93 39.8
Actinidia17303 Actinidia chinensis HOM05D007032 ORTHO05D008777 2.6e-07 60.1 73 47.9
PSO170G1327 Papaver somniferum HOM05D009671 ORTHO05D011859 4.4e-07 59.3 61 54.1
CiPaw.10G001100 Carya illinoinensis HOM05D007032 ORTHO05D008777 5.7e-07 58.9 77 45.5
Gorai.013G203200 Gossypium raimondii HOM05D007032 ORTHO05D008777 5.7e-07 58.9 77 45.5
QL01p030432 Quercus lobata HOM05D006731 ORTHO05D007597 5.7e-07 58.9 53 56.6
CANSAT80G1180 Cannabis sativa HOM05D000367 ORTHO05D001438 9.7e-07 58.2 76 42.1
Oeu000250.1 Olea europaea HOM05D000367 ORTHO05D001438 9.7e-07 58.2 76 43.4
AagrBONN_evm.TU.Sc2ySwM_228.3743 Anthoceros agrestis HOM05D003458 ORTHO05D003854 1.3e-06 57.8 123 30.1
Oeu019234.1 Olea europaea HOM05D000367 ORTHO05D001438 1.3e-06 57.8 79 41.8
vmacro09138 Vaccinium macrocarpon HOM05D007032 ORTHO05D008777 1.3e-06 57.8 56 51.8
MSTRG.18560 Avicennia marina HOM05D006731 ORTHO05D007597 1.7e-06 57.4 54 55.6
Actinidia38613 Actinidia chinensis HOM05D007032 ORTHO05D008777 2.8e-06 56.6 80 42.5
MSTRG.26067 Avicennia marina HOM05D007032 ORTHO05D008777 2.8e-06 56.6 61 47.5
Gohir.A13G172000 Gossypium hirsutum HOM05D007032 ORTHO05D008777 2.8e-06 56.6 77 44.2
Gohir.D13G177900 Gossypium hirsutum HOM05D007032 ORTHO05D008777 3.7e-06 56.2 77 44.2
TWI77G0246 Tripterygium wilfordii HOM05D000367 ORTHO05D001438 3.7e-06 56.2 61 45.9
AL4G11860 Arabidopsis lyrata HOM05D000367 ORTHO05D001438 4.8e-06 55.8 79 39.2
AT2G22360 Arabidopsis thaliana HOM05D000367 ORTHO05D001438 4.8e-06 55.8 61 45.9
A04p16830 Brassica napus HOM05D000367 ORTHO05D001438 4.8e-06 55.8 79 39.2
CSS0032159 Camellia sinensis var. sinensis HOM05D007032 ORTHO05D008777 4.8e-06 55.8 65 47.7
DCAR_017051 Daucus carota HOM05D007032 ORTHO05D008777 4.8e-06 55.8 52 53.8
PSO781G0091 Papaver somniferum HOM05D000367 ORTHO05D001438 4.8e-06 55.8 54 50.0
Pp3c23_10390 Physcomitrium patens HOM05D006731 ORTHO05D007597 4.8e-06 55.8 57 50.9
AagrBONN_evm.TU.Sc2ySwM_228.3720 Anthoceros agrestis HOM05D003458 ORTHO05D003854 6.3e-06 55.5 104 31.7
C04p51410 Brassica napus HOM05D000367 ORTHO05D001438 6.3e-06 55.5 79 39.2
BolC4t26733H Brassica oleracea HOM05D000367 ORTHO05D001438 6.3e-06 55.5 79 39.2
ECA246G2335 Erigeron canadensis HOM05D003458 ORTHO05D003854 6.3e-06 55.5 56 50.0
Thhalv10000164m.g Eutrema salsugineum HOM05D000367 ORTHO05D001438 6.3e-06 55.5 79 39.2
Manes.06G008600 Manihot esculenta HOM05D000367 ORTHO05D001438 6.3e-06 55.5 61 44.3
SMO119G0204 Selaginella moellendorffii HOM05D003458 ORTHO05D003854 6.3e-06 55.5 60 50.0
VMungo1383G0477 Vigna mungo HOM05D007032 ORTHO05D008777 6.3e-06 55.5 78 41.0
A01p00860 Brassica napus HOM05D000367 ORTHO05D001438 8.2e-06 55.1 108 34.3
Carub.0004s0154 Capsella rubella HOM05D000367 ORTHO05D001438 8.2e-06 55.1 79 39.2
CARHR246720 Cardamine hirsuta HOM05D000367 ORTHO05D001438 8.2e-06 55.1 79 40.5
Migut.K00006 Erythranthe guttata HOM05D007032 ORTHO05D008777 8.2e-06 55.1 60 46.7
Thhalv10025198m.g Eutrema salsugineum HOM05D000367 ORTHO05D001438 8.2e-06 55.1 79 40.5
Sp7g35910 Schrenkiella parvula HOM05D000367 ORTHO05D001438 8.2e-06 55.1 79 40.5
Thecc.05G294800 Theobroma cacao HOM05D007032 ORTHO05D008777 8.2e-06 55.1 72 45.8


User provided reference genes

Program Settings