Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p46180 Brassica napus HOM05D003697 ORTHO05D033244 2.2e-79 298.9 153 100.0
C06p46230 Brassica napus HOM05D003697 ORTHO05D033244 2.2e-79 298.9 153 100.0
BcaC08g46557 Brassica carinata HOM05D003697 ORTHO05D005452 2.7e-77 292.0 152 99.3
BolC6t39589H Brassica oleracea HOM05D003697 ORTHO05D005452 2.7e-77 292.0 152 99.3
C06p45330 Brassica napus HOM05D003697 ORTHO05D005452 7.9e-77 290.4 152 98.7
BraA07t31318Z Brassica rapa HOM05D003697 ORTHO05D005452 7.9e-77 290.4 152 98.7
A07p37570 Brassica napus HOM05D003697 ORTHO05D005452 3.0e-76 288.5 152 98.0
Thhalv10018004m.g Eutrema salsugineum HOM05D003697 ORTHO05D005452 5.0e-71 271.2 152 91.4
BcaB03g14881 Brassica carinata HOM05D003697 ORTHO05D005452 4.2e-70 268.1 143 96.5
Sp5g26380 Schrenkiella parvula HOM05D003697 ORTHO05D005452 7.2e-70 267.3 151 92.1
CARHR064520 Cardamine hirsuta HOM05D003697 ORTHO05D005452 2.7e-69 265.4 152 89.5
AT1G71220 Arabidopsis thaliana HOM05D003697 ORTHO05D005452 6.1e-69 264.2 152 89.5
Carub.0002s1810 Capsella rubella HOM05D003697 ORTHO05D005452 7.9e-69 263.8 152 89.5
AL2G30830 Arabidopsis lyrata HOM05D003697 ORTHO05D005452 1.4e-68 263.1 152 89.5
Aa31LG4G9290 Aethionema arabicum HOM05D003697 ORTHO05D005452 7.4e-67 257.3 152 88.2
THA.LOC104801984 Tarenaya hassleriana HOM05D003697 ORTHO05D005452 1.6e-56 223.0 152 75.0
Cpa.g.sc30.4 Carica papaya HOM05D003697 ORTHO05D005452 1.5e-54 216.5 152 74.3
Duzib248G1637 Durio zibethinus HOM05D003697 ORTHO05D005452 1.0e-52 210.3 152 71.7
Dinv24296 Davidia involucrata HOM05D003697 ORTHO05D005452 1.4e-52 209.9 152 69.7
Atru.chr3.1599 Acer truncatum HOM05D003697 ORTHO05D005452 4.0e-52 208.4 152 71.1
Atru.chr3.1607 Acer truncatum HOM05D003697 ORTHO05D005452 4.0e-52 208.4 152 71.1
COL.COLO4_11778 Corchorus olitorius HOM05D003697 ORTHO05D005452 5.2e-52 208.0 152 71.1
Dinv19381 Davidia involucrata HOM05D003697 ORTHO05D005452 1.5e-51 206.5 152 69.1
Sabra03G0010400 Salix brachista HOM05D003697 ORTHO05D005452 2.0e-51 206.1 152 70.4
TWI14G0038 Tripterygium wilfordii HOM05D003697 ORTHO05D005452 2.0e-51 206.1 152 69.1
GSVIVG01022867001 Vitis vinifera HOM05D003697 ORTHO05D005452 2.6e-51 205.7 152 69.1
Thecc.02G088500 Theobroma cacao HOM05D003697 ORTHO05D005452 3.4e-51 205.3 152 70.4
Potri.003G018900 Populus trichocarpa HOM05D003697 ORTHO05D005452 2.8e-50 202.2 152 69.1
Cfa005504 Carpinus fangiana HOM05D003697 ORTHO05D005452 6.3e-50 201.1 152 69.1
QL02p099301 Quercus lobata HOM05D003697 ORTHO05D005452 8.3e-50 200.7 151 68.9
Haze_01738 Corylus avellana HOM05D003697 ORTHO05D005452 1.1e-49 200.3 152 69.1
Gohir.A04G121300 Gossypium hirsutum HOM05D003697 ORTHO05D005452 1.4e-49 199.9 152 67.8
Gohir.A12G027900 Gossypium hirsutum HOM05D003697 ORTHO05D005452 1.4e-49 199.9 152 69.1
Gorai.008G028000 Gossypium raimondii HOM05D003697 ORTHO05D005452 1.8e-49 199.5 152 69.1
Gohir.D04G163800 Gossypium hirsutum HOM05D003697 ORTHO05D005452 4.1e-49 198.4 152 67.1
BcaB03g14879 Brassica carinata HOM05D003697 ORTHO05D005452 9.1e-49 197.2 152 71.7
Ciclev10000024m.g Citrus clementina HOM05D003697 ORTHO05D005452 9.1e-49 197.2 152 69.1
Gorai.012G151700 Gossypium raimondii HOM05D003697 ORTHO05D005452 2.7e-48 195.7 152 66.4
Hma1.2p1_0217F.1_g092200 Hydrangea macrophylla HOM05D003697 ORTHO05D005452 4.5e-48 194.9 152 66.4
Hma1.2p1_0217F.1_g092210 Hydrangea macrophylla HOM05D003697 ORTHO05D005452 4.5e-48 194.9 152 66.4
CANSAT11G1101 Cannabis sativa HOM05D003697 ORTHO05D005452 1.0e-47 193.7 152 67.1
Eucgr.I02739 Eucalyptus grandis HOM05D003697 ORTHO05D005452 1.0e-47 193.7 152 65.1
PGR142G1992 Punica granatum HOM05D003697 ORTHO05D005452 1.0e-47 193.7 152 65.8
vmacro19883 Vaccinium macrocarpon HOM05D003697 ORTHO05D005452 5.0e-47 191.4 152 64.5
Prupe.1G572000 Prunus persica HOM05D003697 ORTHO05D005452 6.5e-47 191.0 152 66.4
Lj5C253T9 Lonicera japonica HOM05D003697 ORTHO05D005452 8.5e-47 190.7 152 63.8
CiPaw.06G146300 Carya illinoinensis HOM05D003697 ORTHO05D005452 1.9e-46 189.5 152 67.1
TAR381G0967 Trochodendron aralioides HOM05D003697 ORTHO05D005452 1.9e-46 189.5 152 63.8
Cc02_g22700 Coffea canephora HOM05D003697 ORTHO05D005452 7.2e-46 187.6 152 62.5
MD15G1427500 Malus domestica HOM05D003697 ORTHO05D005452 3.6e-45 185.3 152 63.8
RcHm_v2.0_Chr7g0221551 Rosa chinensis HOM05D003697 ORTHO05D005452 6.1e-45 184.5 152 63.8
SalBow7G4621 Salvia bowleyana HOM05D003697 ORTHO05D005452 1.0e-44 183.7 153 64.1
Migut.B00820 Erythranthe guttata HOM05D003697 ORTHO05D005452 1.4e-44 183.3 152 63.2
ClCG05G009570 Citrullus lanatus HOM05D003697 ORTHO05D005452 2.3e-44 182.6 152 65.1
CsaV3_3G019150 Cucumis sativus L. HOM05D003697 ORTHO05D005452 2.3e-44 182.6 152 65.1
FAN04G3000 Fragaria x ananassa HOM05D003697 ORTHO05D005452 2.3e-44 182.6 152 62.5
Manes.10G121900 Manihot esculenta HOM05D003697 ORTHO05D005452 2.3e-44 182.6 152 61.2
Rhsim05G0119800 Rhododendron simsii HOM05D003697 ORTHO05D005452 2.3e-44 182.6 174 56.3
Actinidia26154 Actinidia chinensis HOM05D003697 ORTHO05D005452 3.0e-44 182.2 152 63.2
MSTRG.20304 Avicennia marina HOM05D003697 ORTHO05D005452 3.0e-44 182.2 152 62.5
CSS0042528 Camellia sinensis var. sinensis HOM05D003697 ORTHO05D005452 3.0e-44 182.2 152 61.2
HanXRQChr09g0249001 Helianthus annuus HOM05D003697 ORTHO05D005452 4.0e-44 181.8 152 62.5
MD08G1235900 Malus domestica HOM05D003697 ORTHO05D005452 4.0e-44 181.8 152 63.2
ECA240G1790 Erigeron canadensis HOM05D003697 ORTHO05D005452 5.2e-44 181.4 152 60.5
SGA_v2.0_scaffold110G31335 Striga asiatica HOM05D003697 ORTHO05D005452 5.2e-44 181.4 151 63.6
Oeu027795.2 Olea europaea HOM05D003697 ORTHO05D005452 6.8e-44 181.0 152 61.2
Nn1g08409 Nelumbo nucifera HOM05D003697 ORTHO05D005452 1.2e-43 180.3 152 59.2
MELO3C019456.2 Cucumis melo HOM05D003697 ORTHO05D005452 1.5e-43 179.9 152 64.5
FvH4_5g28990 Fragaria vesca HOM05D003697 ORTHO05D005452 1.5e-43 179.9 152 61.8
FAN13G2190 Fragaria x ananassa HOM05D003697 ORTHO05D005452 2.6e-43 179.1 152 61.2
Sed0005890 Sechium edule HOM05D003697 ORTHO05D005452 2.6e-43 179.1 152 63.8
FAN18G2119 Fragaria x ananassa HOM05D003697 ORTHO05D005452 3.4e-43 178.7 152 60.5
Aqoxy5G02635 Aquilegia oxysepala HOM05D003697 ORTHO05D005452 5.7e-43 177.9 152 59.9
FAN08G0197 Fragaria x ananassa HOM05D003697 ORTHO05D005452 7.5e-43 177.6 152 60.5
EL10Ac4g08781 Beta vulgaris HOM05D003697 ORTHO05D005452 9.8e-43 177.2 152 61.2
Lsat_1_v5_gn_9_118481 Lactuca sativa HOM05D003697 ORTHO05D005452 4.9e-42 174.9 152 59.9
DCAR_006698 Daucus carota HOM05D003697 ORTHO05D005452 8.3e-42 174.1 152 57.2
Sc02g0002740 Simmondsia chinensis HOM05D003697 ORTHO05D005452 1.8e-41 172.9 152 61.2
AUR62042597 Chenopodium quinoa HOM05D003697 ORTHO05D005452 3.1e-41 172.2 152 60.5
Peaxi162Scf00011g00526 Petunia axillaris HOM05D003697 ORTHO05D005452 3.1e-41 172.2 151 59.6
Nitab4.5_0000816g0140 Nicotiana tabacum HOM05D003697 ORTHO05D005452 9.2e-41 170.6 151 58.3
TPR.G2085 Trifolium pratense HOM05D003697 ORTHO05D005452 9.2e-41 170.6 152 58.6
unitig_749.g14126 Utricularia gibba HOM05D003697 ORTHO05D005452 9.2e-41 170.6 152 59.2
Nitab4.5_0008466g0010 Nicotiana tabacum HOM05D003697 ORTHO05D005452 1.6e-40 169.9 151 58.3
PSO017G4515 Papaver somniferum HOM05D003697 ORTHO05D005452 2.7e-40 169.1 151 58.3
SHI16668 Sapria himalayana HOM05D003697 ORTHO05D005452 2.7e-40 169.1 141 56.0
Glyma.05G168600 Glycine max HOM05D003697 ORTHO05D005452 5.9e-40 167.9 152 58.6
Medtr2g006960 Medicago truncatula HOM05D003697 ORTHO05D005452 5.9e-40 167.9 152 57.9
AUR62037329 Chenopodium quinoa HOM05D003697 ORTHO05D005452 1.3e-39 166.8 159 57.9
Glyma.08G187500 Glycine max HOM05D003697 ORTHO05D005452 1.3e-39 166.8 152 57.9
ATR1136G197 Amborella trichopoda HOM05D003697 ORTHO05D005452 1.7e-39 166.4 155 58.1
Lj6g0024422 Lotus japonicus HOM05D003697 ORTHO05D005452 5.0e-39 164.9 152 56.6
PSO170G2453 Papaver somniferum HOM05D003697 ORTHO05D005452 6.6e-39 164.5 151 57.0
Lalb_Chr13g0295701 Lupinus albus HOM05D003697 ORTHO05D005452 1.9e-38 162.9 152 55.9
Glyma.08G127200 Glycine max HOM05D003697 ORTHO05D005452 2.5e-38 162.5 152 55.9
Solyc01g104040.4 Solanum lycopersicum HOM05D003697 ORTHO05D005452 2.5e-38 162.5 151 55.0
CDE06G0802 Ceratophyllum demersum HOM05D003697 ORTHO05D005452 9.5e-38 160.6 138 61.6
Sopen01g046450 Solanum pennellii HOM05D003697 ORTHO05D005452 9.5e-38 160.6 151 54.3
VMungo0540G0442 Vigna mungo HOM05D003697 ORTHO05D005452 3.6e-37 158.7 152 55.9
Phvul.006G215600 Phaseolus vulgaris HOM05D003697 ORTHO05D005452 1.4e-36 156.8 152 54.6
arahy.Tifrunner.gnm1.ann1.IR21Q7 Arachis hypogaea HOM05D003697 ORTHO05D005452 2.3e-36 156.0 152 55.3
arahy.Tifrunner.gnm1.ann1.6LDV6M Arachis hypogaea HOM05D003697 ORTHO05D005452 3.0e-36 155.6 152 54.6
SEGI_03237 Sequoiadendron giganteum HOM05D003697 ORTHO05D005452 2.6e-35 152.5 148 54.1
Psat7g199600 Pisum sativum HOM05D003697 ORTHO05D023078 2.2e-34 149.4 153 52.9
CAN.G798.12 Capsicum annuum HOM05D003697 ORTHO05D005452 2.0e-32 142.9 124 59.7
Psat7g198520 Pisum sativum HOM05D003697 ORTHO05D005452 5.9e-32 141.4 133 57.9
Ca_00071_v3 Cicer arietinum L. HOM05D003697 ORTHO05D005452 1.3e-31 140.2 152 50.7
Psat5g083120 Pisum sativum HOM05D003697 ORTHO05D002190 5.0e-31 138.3 131 56.5
HPP92_015204 Vanilla planifolia HOM05D003697 ORTHO05D005452 4.3e-30 135.2 149 48.3
Zm00001eb258320 Zea mays HOM05D003697 ORTHO05D005452 4.3e-30 135.2 136 53.7
Psat0s5727g0040 Pisum sativum HOM05D003697 ORTHO05D033244 2.8e-29 132.5 116 58.6
Psat1g065720 Pisum sativum HOM05D003697 ORTHO05D002190 2.0e-27 126.3 120 55.0
Mapoly0156s0022 Marchantia polymorpha HOM05D003697 ORTHO05D005452 3.4e-27 125.6 152 45.4
SMO276G0030 Selaginella moellendorffii HOM05D003697 ORTHO05D005452 5.8e-27 124.8 139 50.4
Pp3c3_14060 Physcomitrium patens HOM05D003697 ORTHO05D005452 2.0e-24 116.3 151 44.4
AagrBONN_evm.TU.Sc2ySwM_362.2359 Anthoceros agrestis HOM05D003697 ORTHO05D005452 2.7e-24 115.9 140 47.1
CBR_g48619 Chara braunii HOM05D003697 ORTHO05D005452 8.6e-23 110.9 137 44.5
Psat0s625g0080 Pisum sativum HOM05D001068 ORTHO05D002190 1.4e-20 103.6 116 50.9
Ah.04g162670 Amaranthus hybridus HOM05D003697 ORTHO05D005452 6.0e-16 88.2 62 69.4
Psat4g083840 Pisum sativum HOM05D003697 ORTHO05D014541 4.7e-13 78.6 66 60.6
Psat5g201760 Pisum sativum HOM05D003697 ORTHO05D023078 2.2e-10 69.7 58 56.9
Psat1g055240 Pisum sativum HOM05D003697 ORTHO05D023078 2.9e-10 69.3 63 54.0


User provided reference genes

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