Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p46160 Brassica napus HOM05D005563 ORTHO05D006667 9.8e-135 483.4 236 100.0
BcaB03g14889 Brassica carinata HOM05D005563 ORTHO05D006667 1.1e-64 250.8 192 70.8
BolC6t38691H Brassica oleracea HOM05D005563 ORTHO05D006667 7.0e-56 221.5 192 65.6
BraA07t30715Z Brassica rapa HOM05D005563 ORTHO05D006667 7.0e-56 221.5 192 65.1
Sp5g26490 Schrenkiella parvula HOM05D005563 ORTHO05D006667 3.5e-55 219.2 192 67.2
BcaB03g15600 Brassica carinata HOM05D005563 ORTHO05D006667 1.3e-54 217.2 201 62.2
Carub.0004s0662 Capsella rubella HOM05D005563 ORTHO05D006667 1.1e-53 214.2 192 62.5
AL2G30920 Arabidopsis lyrata HOM05D005563 ORTHO05D006667 2.1e-52 209.9 192 63.0
C06p35680 Brassica napus HOM05D005563 ORTHO05D006667 2.1e-52 209.9 192 64.1
A07p30780 Brassica napus HOM05D005563 ORTHO05D006667 4.7e-52 208.8 192 63.0
BcaC08g45784 Brassica carinata HOM05D005563 ORTHO05D006667 6.1e-52 208.4 192 63.5
AL1G12770 Arabidopsis lyrata HOM05D005563 ORTHO05D006667 8.0e-52 208.0 192 62.5
AT5G24670 Arabidopsis thaliana HOM05D005563 ORTHO05D006667 1.4e-51 207.2 192 62.0
Carub.0002s1819 Capsella rubella HOM05D005563 ORTHO05D006667 1.8e-51 206.8 192 60.4
Thhalv10018623m.g Eutrema salsugineum HOM05D005563 ORTHO05D006667 4.4e-50 202.2 194 61.9
BcaB03g14888 Brassica carinata HOM05D005563 ORTHO05D006667 1.4e-48 197.2 192 60.4
CARHR064610 Cardamine hirsuta HOM05D005563 ORTHO05D006667 4.1e-48 195.7 192 59.4
THA.LOC104825030 Tarenaya hassleriana HOM05D005563 ORTHO05D006667 9.8e-42 174.5 195 51.8
Aa31LG4G9220 Aethionema arabicum HOM05D005563 ORTHO05D006667 2.8e-41 172.9 192 55.7
Thecc.05G149300 Theobroma cacao HOM05D005563 ORTHO05D006667 1.1e-29 134.4 197 43.7
PGR044G0823 Punica granatum HOM05D005563 ORTHO05D006667 1.5e-29 134.0 191 43.5
Ciclev10020232m.g Citrus clementina HOM05D005563 ORTHO05D006667 1.2e-28 131.0 193 42.5
Haze_14007 Corylus avellana HOM05D005563 ORTHO05D006667 2.8e-28 129.8 189 42.9
DCAR_001180 Daucus carota HOM05D005563 ORTHO05D006667 1.4e-27 127.5 208 38.0
Dinv22054 Davidia involucrata HOM05D005563 ORTHO05D006667 1.8e-27 127.1 199 43.2
Actinidia29363 Actinidia chinensis HOM05D005563 ORTHO05D006667 3.1e-27 126.3 206 39.3
FvH4_2g00270 Fragaria vesca HOM05D005563 ORTHO05D006667 4.0e-27 125.9 189 42.3
CSS0040007 Camellia sinensis var. sinensis HOM05D005563 ORTHO05D006667 5.2e-27 125.6 198 41.4
DCAR_010113 Daucus carota HOM05D005563 ORTHO05D006667 5.2e-27 125.6 208 37.5
Duzib177G0343 Durio zibethinus HOM05D005563 ORTHO05D006667 5.2e-27 125.6 193 40.4
Cfa007306 Carpinus fangiana HOM05D005563 ORTHO05D006667 8.9e-27 124.8 190 43.2
DCAR_027509 Daucus carota HOM05D005563 ORTHO05D006667 8.9e-27 124.8 198 40.4
Potri.013G094800 Populus trichocarpa HOM05D005563 ORTHO05D006667 8.9e-27 124.8 196 42.9
CSS0002080 Camellia sinensis var. sinensis HOM05D005563 ORTHO05D006667 1.2e-26 124.4 198 41.4
VMungo1080G1448 Vigna mungo HOM05D005563 ORTHO05D006667 1.2e-26 124.4 193 43.5
Gohir.A05G248000 Gossypium hirsutum HOM05D005563 ORTHO05D006667 1.5e-26 124.0 198 38.9
Gorai.009G262600 Gossypium raimondii HOM05D005563 ORTHO05D006667 2.6e-26 123.2 198 38.9
Sabra13G0080900 Salix brachista HOM05D005563 ORTHO05D006667 3.4e-26 122.9 196 42.9
CiPaw.04G008700 Carya illinoinensis HOM05D005563 ORTHO05D006667 4.4e-26 122.5 202 39.1
Oeu019017.1 Olea europaea HOM05D005563 ORTHO05D006667 7.5e-26 121.7 202 40.1
RcHm_v2.0_Chr6g0249561 Rosa chinensis HOM05D005563 ORTHO05D006667 9.8e-26 121.3 190 42.1
Prupe.8G002700 Prunus persica HOM05D005563 ORTHO05D006667 1.3e-25 120.9 192 41.7
vmacro07741 Vaccinium macrocarpon HOM05D005563 ORTHO05D006667 1.3e-25 120.9 204 38.7
Atru.chr13.2584 Acer truncatum HOM05D005563 ORTHO05D006667 1.7e-25 120.6 192 41.7
FAN19G1429 Fragaria x ananassa HOM05D005563 ORTHO05D006667 1.7e-25 120.6 213 39.4
Lj3g0011209 Lotus japonicus HOM05D005563 ORTHO05D006667 1.7e-25 120.6 233 38.2
QL09p001227 Quercus lobata HOM05D005563 ORTHO05D006667 1.7e-25 120.6 194 41.2
TPR.G23443 Trifolium pratense HOM05D005563 ORTHO05D006667 1.7e-25 120.6 192 40.6
TWI18G0160 Tripterygium wilfordii HOM05D005563 ORTHO05D006667 1.7e-25 120.6 201 41.8
CANSAT64G1925 Cannabis sativa HOM05D005563 ORTHO05D006667 2.2e-25 120.2 193 42.0
CAN.G587.23 Capsicum annuum HOM05D005563 ORTHO05D006667 3.7e-25 119.4 192 41.1
MD10G1001500 Malus domestica HOM05D005563 ORTHO05D006667 3.7e-25 119.4 192 42.2
Rhsim01G0058900 Rhododendron simsii HOM05D005563 ORTHO05D006667 3.7e-25 119.4 202 38.1
TPR.G11352 Trifolium pratense HOM05D005563 ORTHO05D006667 3.7e-25 119.4 193 40.9
ClCG11G000440 Citrullus lanatus HOM05D005563 ORTHO05D006667 1.1e-24 117.9 191 41.9
Glyma.13G312100 Glycine max HOM05D005563 ORTHO05D006667 1.1e-24 117.9 193 41.5
Cc02_g22680 Coffea canephora HOM05D005563 ORTHO05D006667 2.4e-24 116.7 201 39.8
Nn5g27214 Nelumbo nucifera HOM05D005563 ORTHO05D006667 3.2e-24 116.3 196 42.3
CAN.G769.9 Capsicum annuum HOM05D005563 ORTHO05D006667 4.1e-24 115.9 192 40.6
CsaV3_6G042510 Cucumis sativus L. HOM05D005563 ORTHO05D006667 4.1e-24 115.9 191 40.8
FAN24G3564 Fragaria x ananassa HOM05D005563 ORTHO05D006667 5.4e-24 115.5 208 39.4
Sc19g0006900 Simmondsia chinensis HOM05D005563 ORTHO05D006667 5.4e-24 115.5 203 36.5
Gohir.D05G248801 Gossypium hirsutum HOM05D005563 ORTHO05D006667 7.0e-24 115.2 198 36.9
Phvul.005G118600 Phaseolus vulgaris HOM05D005563 ORTHO05D006667 7.0e-24 115.2 192 41.1
GSVIVG01037139001 Vitis vinifera HOM05D005563 ORTHO05D006667 7.0e-24 115.2 191 39.8
MELO3C022956.2 Cucumis melo HOM05D005563 ORTHO05D006667 9.2e-24 114.8 191 40.8
Solyc03g026100.1 Solanum lycopersicum HOM05D005563 ORTHO05D006667 9.2e-24 114.8 198 39.9
Rhsim01G0059200 Rhododendron simsii HOM05D005563 ORTHO05D006667 1.2e-23 114.4 202 37.1
Ca_17321_v3 Cicer arietinum L. HOM05D005563 ORTHO05D006667 1.6e-23 114.0 206 39.3
Sopen03g004940 Solanum pennellii HOM05D005563 ORTHO05D006667 2.7e-23 113.2 192 42.2
Lalb_Chr24g0393341 Lupinus albus HOM05D005563 ORTHO05D006667 3.5e-23 112.8 194 40.7
Nitab4.5_0006591g0020 Nicotiana tabacum HOM05D005563 ORTHO05D006667 4.6e-23 112.5 192 41.1
PGSC0003DMG400014277 Solanum tuberosum HOM05D005563 ORTHO05D006667 6.0e-23 112.1 198 39.4
ECA232G0495 Erigeron canadensis HOM05D004116 ORTHO05D004734 1.0e-22 111.3 193 38.3
Psat7g014680 Pisum sativum HOM05D005563 ORTHO05D006667 1.0e-22 111.3 201 37.3
Oeu009445.1 Olea europaea HOM05D005563 ORTHO05D006667 1.3e-22 110.9 202 38.6
TAR628G0232 Trochodendron aralioides HOM05D005563 ORTHO05D006667 1.7e-22 110.5 198 36.4
Hund26934 Selenicereus undatus HOM05D005563 ORTHO05D006667 2.3e-22 110.2 193 36.8
PSO170G2533 Papaver somniferum HOM05D005563 ORTHO05D006667 3.0e-22 109.8 194 36.6
Eucgr.G00337 Eucalyptus grandis HOM05D005563 ORTHO05D006667 6.6e-22 108.6 193 37.8
arahy.Tifrunner.gnm1.ann1.QV839S Arachis hypogaea HOM05D005563 ORTHO05D006667 1.5e-21 107.5 201 38.3
PSO407G0243 Papaver somniferum HOM05D005563 ORTHO05D006667 1.5e-21 107.5 194 34.5
Medtr8g103020 Medicago truncatula HOM05D005563 ORTHO05D006667 1.9e-21 107.1 191 37.2
PSO017G5640 Papaver somniferum HOM05D005563 ORTHO05D006667 7.3e-21 105.1 197 35.5
arahy.Tifrunner.gnm1.ann1.NB4SND Arachis hypogaea HOM05D005563 ORTHO05D006667 9.5e-21 104.8 211 37.4
BolC6t39597H Brassica oleracea HOM05D005563 ORTHO05D006667 1.2e-20 104.4 121 53.7
Eucgr.C03620 Eucalyptus grandis HOM05D005563 ORTHO05D006667 1.2e-20 104.4 192 37.0
Migut.G00338 Erythranthe guttata HOM05D005563 ORTHO05D006667 4.7e-20 102.4 202 38.6
AUR62023340 Chenopodium quinoa HOM05D005563 ORTHO05D006667 8.1e-20 101.7 198 40.9
SGA_v2.0_scaffold277G46672 Striga asiatica HOM05D005563 ORTHO05D006667 2.3e-19 100.1 211 37.0
Cpa.g.sc249.8 Carica papaya HOM05D005563 ORTHO05D006667 4.0e-19 99.4 167 40.7
Aqoxy1G00244 Aquilegia oxysepala HOM05D005563 ORTHO05D006667 6.8e-19 98.6 193 36.8
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 1.5e-18 97.4 212 34.4
Lsat_1_v5_gn_4_170241 Lactuca sativa HOM05D005563 ORTHO05D006667 5.8e-18 95.5 186 36.0
PSO761G0451 Papaver somniferum HOM05D005563 ORTHO05D006667 5.8e-18 95.5 192 35.4
ATR0580G344 Amborella trichopoda HOM05D005563 ORTHO05D006667 6.0e-15 85.5 196 33.2
Thecc.10G189600 Theobroma cacao HOM05D005563 ORTHO05D006667 1.7e-14 84.0 99 47.5
AUR62013814 Chenopodium quinoa HOM05D005563 ORTHO05D006667 3.6e-12 76.3 97 46.4
MBI14_g08074_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 3.6e-12 76.3 157 36.9
Manes.18G108800 Manihot esculenta HOM05D005563 ORTHO05D006667 4.7e-12 75.9 133 38.3
Eucgr.L00998 Eucalyptus grandis HOM05D005563 ORTHO05D006667 1.4e-11 74.3 194 33.5
Nitab4.5_0000079g0140 Nicotiana tabacum HOM05D005563 ORTHO05D006667 1.2e-10 71.2 182 35.7
COL.COLO4_34067 Corchorus olitorius HOM05D005563 ORTHO05D006667 4.4e-10 69.3 199 29.6
Nitab4.5_0001489g0080 Nicotiana tabacum HOM05D005563 ORTHO05D006667 6.4e-09 65.5 150 36.0
SMO356G0078 Selaginella moellendorffii HOM05D005563 ORTHO05D006667 2.7e-07 60.1 187 29.9
HanXRQChr15g0488461 Helianthus annuus HOM05D005563 ORTHO05D006667 3.5e-07 59.7 135 34.1
Peaxi162Scf00078g01133 Petunia axillaris HOM05D005563 ORTHO05D006667 6.0e-07 58.9 130 33.1
AagrBONN_evm.TU.Sc2ySwM_344.1216 Anthoceros agrestis HOM05D005563 ORTHO05D006667 2.3e-06 57.0 192 28.6
TAR633G2728 Trochodendron aralioides HOM05D005563 ORTHO05D006667 3.0e-06 56.6 136 31.6
Mapoly0019s0003 Marchantia polymorpha HOM05D005563 ORTHO05D006667 5.1e-06 55.8 194 29.4
Pp3c5_5220 Physcomitrium patens HOM05D005563 ORTHO05D006667 8.6e-06 55.1 181 29.3
Sed0012109 Sechium edule HOM05D005563 ORTHO05D006667 8.6e-06 55.1 105 40.0


User provided reference genes

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