Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p45250 Brassica napus HOM05D005473 ORTHO05D006543 1.0e-91 340.1 181 100.0
BcaC08g46554 Brassica carinata HOM05D005473 ORTHO05D006543 1.3e-89 333.2 181 98.3
BolC6t39580H Brassica oleracea HOM05D005473 ORTHO05D006543 1.3e-89 333.2 181 98.3
A07p37530 Brassica napus HOM05D000048 ORTHO05D006543 3.2e-77 292.0 181 86.7
BraA07t31315Z Brassica rapa HOM05D005473 ORTHO05D006543 3.2e-77 292.0 181 86.7
BcaB03g14874 Brassica carinata HOM05D005473 ORTHO05D006543 1.0e-75 287.0 182 84.1
Sp5g26320 Schrenkiella parvula HOM05D005473 ORTHO05D006543 4.4e-66 255.0 189 75.1
Thhalv10018995m.g Eutrema salsugineum HOM05D005473 ORTHO05D006543 3.5e-63 245.4 190 73.7
CARHR064450 Cardamine hirsuta HOM05D005473 ORTHO05D006543 3.6e-60 235.3 184 71.7
AT1G71150 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 4.4e-58 228.4 179 70.9
AL2G30760 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 1.6e-55 219.9 186 67.7
Carub.0002s1804 Capsella rubella HOM05D005473 ORTHO05D006543 1.5e-53 213.4 185 68.1
A01p19890 Brassica napus HOM05D005473 ORTHO05D006543 1.8e-48 196.4 178 59.6
C05p22180 Brassica napus HOM05D005473 ORTHO05D006543 9.1e-48 194.1 180 58.3
AL1G36530 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 1.2e-47 193.7 181 59.7
Aa31LG7G6980 Aethionema arabicum HOM05D005473 ORTHO05D006543 2.0e-47 193.0 192 57.8
Carub.0001s2247 Capsella rubella HOM05D005473 ORTHO05D006543 2.0e-47 193.0 182 57.7
BcaB07g32295 Brassica carinata HOM05D005473 ORTHO05D006543 1.3e-46 190.3 184 59.2
BcaC05g26209 Brassica carinata HOM05D005473 ORTHO05D006543 2.3e-46 189.5 180 57.2
BolC5t30918H Brassica oleracea HOM05D005473 ORTHO05D006543 2.3e-46 189.5 180 57.2
A09p41740 Brassica napus HOM05D005473 ORTHO05D006543 2.9e-46 189.1 183 57.9
BraA09t39663Z Brassica rapa HOM05D005473 ORTHO05D006543 1.9e-45 186.4 177 57.6
CARHR023350 Cardamine hirsuta HOM05D005473 ORTHO05D006543 1.9e-45 186.4 184 56.0
AT1G22970 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 3.3e-45 185.7 183 56.8
Thhalv10008033m.g Eutrema salsugineum HOM05D005473 ORTHO05D006543 1.2e-39 167.2 182 53.8
Ciclev10015542m.g Citrus clementina HOM05D005473 ORTHO05D006543 3.3e-37 159.1 183 52.5
Gorai.009G342800 Gossypium raimondii HOM05D005473 ORTHO05D006543 3.3e-37 159.1 191 47.1
Gohir.D05G319500 Gossypium hirsutum HOM05D005473 ORTHO05D006543 2.8e-36 156.0 191 46.6
Dinv04903 Davidia involucrata HOM05D005473 ORTHO05D006543 6.1e-36 154.8 191 48.2
Atru.chr11.335 Acer truncatum HOM05D005473 ORTHO05D006543 1.4e-35 153.7 190 47.4
Sp1g20430 Schrenkiella parvula HOM05D005473 ORTHO05D006543 2.3e-35 152.9 182 50.5
Atru.chr11.342 Acer truncatum HOM05D005473 ORTHO05D006543 3.1e-35 152.5 190 46.8
Thecc.02G215500 Theobroma cacao HOM05D005473 ORTHO05D006543 8.9e-35 151.0 194 45.4
COL.COLO4_20121 Corchorus olitorius HOM05D005473 ORTHO05D006543 1.2e-34 150.6 192 45.8
Duzib268G1740 Durio zibethinus HOM05D005473 ORTHO05D006543 1.2e-34 150.6 191 44.5
Ca_23703_v3 Cicer arietinum L. HOM05D005473 ORTHO05D006543 1.5e-34 150.2 186 46.2
Ca_30210_v3 Cicer arietinum L. HOM05D005473 ORTHO05D006543 1.5e-34 150.2 186 46.2
Sabra16G0274100 Salix brachista HOM05D005473 ORTHO05D006543 2.6e-34 149.4 186 47.3
Sabra08G0095200 Salix brachista HOM05D005473 ORTHO05D006543 3.4e-34 149.1 186 47.3
Potri.008G126400 Populus trichocarpa HOM05D005473 ORTHO05D006543 4.4e-34 148.7 192 46.9
FAN22G1873 Fragaria x ananassa HOM05D005473 ORTHO05D006543 5.8e-34 148.3 184 47.3
CSS0031478 Camellia sinensis var. sinensis HOM05D005473 ORTHO05D006543 7.5e-34 147.9 174 48.9
Cfa015813 Carpinus fangiana HOM05D000048 ORTHO05D000207 1.3e-33 147.1 190 46.3
FvH4_4g26380 Fragaria vesca HOM05D005473 ORTHO05D006543 1.3e-33 147.1 184 47.3
FAN12G0751 Fragaria x ananassa HOM05D005473 ORTHO05D006543 1.3e-33 147.1 184 47.3
FAN12G1468 Fragaria x ananassa HOM05D005473 ORTHO05D006543 1.3e-33 147.1 184 47.3
Gohir.A05G317600 Gossypium hirsutum HOM05D005473 ORTHO05D006543 1.7e-33 146.7 191 44.0
RcHm_v2.0_Chr4g0434011 Rosa chinensis HOM05D005473 ORTHO05D006543 2.2e-33 146.4 180 49.4
GSVIVG01011804001 Vitis vinifera HOM05D005473 ORTHO05D006543 2.2e-33 146.4 191 44.0
FAN17G2750 Fragaria x ananassa HOM05D005473 ORTHO05D006543 3.7e-33 145.6 184 46.7
Cpa.g.sc65.93 Carica papaya HOM05D005473 ORTHO05D006543 6.4e-33 144.8 173 48.0
Rhsim12G0088500 Rhododendron simsii HOM05D005473 ORTHO05D006543 6.4e-33 144.8 182 48.4
Haze_00685 Corylus avellana HOM05D005473 ORTHO05D006543 8.3e-33 144.4 190 44.7
FAN07G2597 Fragaria x ananassa HOM05D005473 ORTHO05D006543 8.3e-33 144.4 184 46.2
Thecc.02G215400 Theobroma cacao HOM05D005473 ORTHO05D006543 1.1e-32 144.1 194 43.3
TAR622G1045 Trochodendron aralioides HOM05D005473 ORTHO05D006543 1.4e-32 143.7 182 47.3
Cc11_g09260 Coffea canephora HOM05D005473 ORTHO05D006543 1.9e-32 143.3 181 48.1
Lj3A877T94 Lonicera japonica HOM05D005473 ORTHO05D006543 4.1e-32 142.1 195 45.6
Medtr1g109070 Medicago truncatula HOM05D005473 ORTHO05D006543 9.2e-32 141.0 181 46.4
QL01p003042 Quercus lobata HOM05D005473 ORTHO05D006543 1.2e-31 140.6 190 44.7
TPR.G4908 Trifolium pratense HOM05D005473 ORTHO05D006543 1.2e-31 140.6 181 45.3
Lj5g0028089 Lotus japonicus HOM05D005473 ORTHO05D006543 1.6e-31 140.2 194 43.3
Prupe.1G320100 Prunus persica HOM05D005473 ORTHO05D006543 1.6e-31 140.2 180 47.8
Hma1.2p1_0114F.1_g055460 Hydrangea macrophylla HOM05D005473 ORTHO05D006543 2.0e-31 139.8 179 48.0
Peaxi162Scf00205g01024 Petunia axillaris HOM05D000048 ORTHO05D006543 2.7e-31 139.4 191 45.5
Nn4g24024 Nelumbo nucifera HOM05D005473 ORTHO05D006543 4.6e-31 138.7 188 44.7
Nitab4.5_0013146g0010 Nicotiana tabacum HOM05D005473 ORTHO05D006543 4.6e-31 138.7 194 44.8
SalBow8G1667 Salvia bowleyana HOM05D005473 ORTHO05D006543 1.0e-30 137.5 191 43.5
arahy.Tifrunner.gnm1.ann1.45PR62 Arachis hypogaea HOM05D005473 ORTHO05D006543 1.3e-30 137.1 191 43.5
Eucgr.K00649 Eucalyptus grandis HOM05D005473 ORTHO05D006543 1.7e-30 136.7 193 43.0
Psat6g222680 Pisum sativum HOM05D005473 ORTHO05D006543 1.7e-30 136.7 176 44.3
Solyc05g008520.3 Solanum lycopersicum HOM05D005473 ORTHO05D006543 1.7e-30 136.7 180 48.3
MSTRG.875 Avicennia marina HOM05D005473 ORTHO05D006543 3.0e-30 136.0 191 44.5
arahy.Tifrunner.gnm1.ann1.GULV0C Arachis hypogaea HOM05D005473 ORTHO05D006543 3.9e-30 135.6 191 43.5
Manes.14G109600 Manihot esculenta HOM05D005473 ORTHO05D006543 1.1e-29 134.0 190 46.3
Sed0015008 Sechium edule HOM05D005473 ORTHO05D006543 1.1e-29 134.0 188 43.6
CiPaw.05G245400 Carya illinoinensis HOM05D005473 ORTHO05D006543 1.5e-29 133.7 180 46.7
AUR62002772 Chenopodium quinoa HOM05D005473 ORTHO05D006543 1.5e-29 133.7 170 44.7
CANSAT01G2653 Cannabis sativa HOM05D005473 ORTHO05D006543 1.9e-29 133.3 185 42.7
CAN.G1489.13 Capsicum annuum HOM05D005473 ORTHO05D006543 3.3e-29 132.5 183 45.9
Sopen05g004360 Solanum pennellii HOM05D005473 ORTHO05D006543 3.3e-29 132.5 180 47.2
PGSC0003DMG400030516 Solanum tuberosum HOM05D005473 ORTHO05D006543 4.3e-29 132.1 180 47.2
vmacro01424 Vaccinium macrocarpon HOM05D005473 ORTHO05D006543 4.3e-29 132.1 182 44.5
Lalb_Chr06g0165731 Lupinus albus HOM05D005473 ORTHO05D006543 7.3e-29 131.3 186 41.9
ClCG05G022330 Citrullus lanatus HOM05D005473 ORTHO05D006543 9.5e-29 131.0 192 44.3
PGR119G2355 Punica granatum HOM05D005473 ORTHO05D006543 9.5e-29 131.0 179 44.1
Potri.010G117100 Populus trichocarpa HOM05D005473 ORTHO05D006543 1.6e-28 130.2 175 43.4
Phvul.007G034400 Phaseolus vulgaris HOM05D005473 ORTHO05D006543 2.1e-28 129.8 182 43.4
AUR62037258 Chenopodium quinoa HOM05D005473 ORTHO05D006543 3.6e-28 129.0 174 44.3
VMungo0720G0454 Vigna mungo HOM05D005473 ORTHO05D006543 4.7e-28 128.6 186 42.5
CsaV3_5G034770 Cucumis sativus L. HOM05D005473 ORTHO05D006543 6.2e-28 128.3 182 46.2
EL10Ac6g14276 Beta vulgaris HOM05D005473 ORTHO05D006543 8.0e-28 127.9 184 40.2
ECA246G4292 Erigeron canadensis HOM05D005473 ORTHO05D006543 8.0e-28 127.9 187 40.1
Ah.03g138500 Amaranthus hybridus HOM05D005473 ORTHO05D006543 3.1e-27 125.9 176 44.9
MELO3C012289.2 Cucumis melo HOM05D005473 ORTHO05D006543 3.1e-27 125.9 182 44.0
Oeu059511.2 Olea europaea HOM05D005473 ORTHO05D006543 3.1e-27 125.9 182 42.9
THA.LOC104812031 Tarenaya hassleriana HOM05D005473 ORTHO05D006543 4.0e-27 125.6 132 53.8
Glyma.20G123200 Glycine max HOM05D005473 ORTHO05D006543 5.2e-27 125.2 190 40.5
Migut.L01020 Erythranthe guttata HOM05D005473 ORTHO05D006543 6.8e-27 124.8 184 44.0
Glyma.10G267900 Glycine max HOM05D005473 ORTHO05D006543 8.9e-27 124.4 190 41.1
SGA_v2.0_scaffold50G18546 Striga asiatica HOM05D005473 ORTHO05D006543 1.5e-26 123.6 184 40.8
Actinidia33629 Actinidia chinensis HOM05D005473 ORTHO05D006543 2.0e-26 123.2 176 44.9
unitig_749.g14005 Utricularia gibba HOM05D005473 ORTHO05D006543 4.4e-26 122.1 175 45.1
Migut.O00950 Erythranthe guttata HOM05D005473 ORTHO05D006543 9.8e-26 120.9 184 42.9
Actinidia31990 Actinidia chinensis HOM05D005473 ORTHO05D006543 1.3e-25 120.6 152 50.0
Lsat_1_v5_gn_3_54040 Lactuca sativa HOM05D005473 ORTHO05D006543 1.3e-25 120.6 192 38.0
DCAR_023622 Daucus carota HOM05D005473 ORTHO05D006543 1.7e-25 120.2 147 50.3
PSO017G4790 Papaver somniferum HOM05D005473 ORTHO05D006543 3.7e-25 119.0 193 39.9
Sc11g0003970 Simmondsia chinensis HOM05D005473 ORTHO05D006543 4.9e-25 118.6 182 40.1
MBI16_g29822_MAGBIO Magnolia biondii HOM05D005473 ORTHO05D006543 1.1e-24 117.5 209 38.3
CDE07G0910 Ceratophyllum demersum HOM05D005473 ORTHO05D006543 3.2e-24 115.9 182 39.0
AL1G36540 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 5.4e-24 115.2 172 42.4
AT1G22980 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 1.2e-23 114.0 179 40.8
TWI79G1332 Tripterygium wilfordii HOM05D005473 ORTHO05D006543 1.2e-23 114.0 177 42.4
HanXRQChr15g0477691 Helianthus annuus HOM05D005473 ORTHO05D006543 3.5e-23 112.5 185 36.2
HPP92_020137 Vanilla planifolia HOM05D005473 ORTHO05D006543 1.3e-22 110.5 182 40.7
PSO782G5692 Papaver somniferum HOM05D005473 ORTHO05D006543 3.0e-22 109.4 197 37.1
PSO478G0709 Papaver somniferum HOM05D005473 ORTHO05D006543 3.9e-22 109.0 197 37.1
Aqoxy5G03875 Aquilegia oxysepala HOM05D005473 ORTHO05D006543 5.1e-22 108.6 188 38.8
Dinv16166 Davidia involucrata HOM05D005473 ORTHO05D006543 1.4e-19 100.5 176 38.1
ATR0691G101 Amborella trichopoda HOM05D005473 ORTHO05D006543 2.2e-17 93.2 207 34.3
Os05g0554500 Oryza sativa ssp. japonica HOM05D005473 ORTHO05D006543 2.9e-17 92.8 176 38.1
Rhsim03G0134600 Rhododendron simsii HOM05D005473 ORTHO05D006543 3.5e-15 85.9 182 40.7
Zm00001eb295130 Zea mays HOM05D005473 ORTHO05D006543 5.6e-13 78.6 160 36.9
Oeu036129.1 Olea europaea HOM05D005473 ORTHO05D006543 1.2e-12 77.4 132 41.7
SEGI_09717 Sequoiadendron giganteum HOM05D005473 ORTHO05D006543 3.1e-11 72.8 186 31.7
HanXRQChr15g0477701 Helianthus annuus HOM05D005473 ORTHO05D006543 9.9e-10 67.8 161 29.2
AagrBONN_evm.TU.Sc2ySwM_344.5342 Anthoceros agrestis HOM05D005473 ORTHO05D006543 1.4e-08 63.9 202 26.2
SMO202G0044 Selaginella moellendorffii HOM05D005473 ORTHO05D006543 3.2e-08 62.8 184 30.4


User provided reference genes

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