Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p44960 Brassica napus HOM05D005158 ORTHO05D005510 1.9e-63 245.7 131 100.0
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 8.4e-27 124.0 107 62.6
BcaC08g46535 Brassica carinata HOM05D005158 ORTHO05D005510 2.1e-25 119.4 62 98.4
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 3.3e-23 112.1 107 59.8
FAN22G1395 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.6e-22 109.8 107 56.1
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 1.6e-22 109.8 107 55.1
SGA_v2.0_scaffold234G43623 Striga asiatica HOM05D005158 ORTHO05D005510 2.1e-22 109.4 107 55.1
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 6.2e-22 107.8 107 55.1
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 6.2e-22 107.8 107 54.2
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 6.2e-22 107.8 107 54.2
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 6.2e-22 107.8 107 56.1
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 8.1e-22 107.5 107 57.9
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 8.1e-22 107.5 107 57.9
Rhsim09G0065800 Rhododendron simsii HOM05D005158 ORTHO05D005510 8.1e-22 107.5 107 57.0
Rhsim09G0065900 Rhododendron simsii HOM05D005158 ORTHO05D005510 8.1e-22 107.5 107 57.0
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.8e-21 106.3 107 56.1
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.8e-21 106.3 107 54.2
Oeu003374.1 Olea europaea HOM05D005158 ORTHO05D005510 1.8e-21 106.3 107 54.2
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 2.4e-21 105.9 107 54.2
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 2.4e-21 105.9 107 55.1
Aqoxy3G00071 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 3.1e-21 105.5 109 51.4
CANSAT64G2776 Cannabis sativa HOM05D005158 ORTHO05D005510 3.1e-21 105.5 109 54.1
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 3.1e-21 105.5 107 55.1
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.1e-21 105.5 107 54.2
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 3.1e-21 105.5 107 53.3
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 4.0e-21 105.1 109 54.1
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 4.0e-21 105.1 107 55.1
FAN07G0555 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.0e-21 105.1 104 54.8
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 4.0e-21 105.1 105 57.1
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 5.3e-21 104.8 107 55.1
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 5.3e-21 104.8 107 56.1
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 5.3e-21 104.8 107 55.1
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 6.9e-21 104.4 107 54.2
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 6.9e-21 104.4 107 55.1
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 6.9e-21 104.4 64 78.1
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 6.9e-21 104.4 107 55.1
Peaxi162Scf00159g01112 Petunia axillaris HOM05D005158 ORTHO05D005510 1.2e-20 103.6 109 52.3
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 1.5e-20 103.2 107 55.1
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 2.0e-20 102.8 106 53.8
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 2.0e-20 102.8 109 52.3
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 2.6e-20 102.4 109 52.3
FAN08G3331 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.6e-20 102.4 107 54.2
FAN13G2578 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.6e-20 102.4 63 77.8
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 2.6e-20 102.4 107 55.1
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 3.4e-20 102.1 109 54.1
Solyc05g017900.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 3.4e-20 102.1 109 52.3
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.5e-20 101.7 107 54.2
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 4.5e-20 101.7 107 54.2
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 4.5e-20 101.7 107 55.1
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 4.5e-20 101.7 107 56.1
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 5.8e-20 101.3 107 53.3
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 7.6e-20 100.9 109 53.2
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 7.6e-20 100.9 105 54.3
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 7.6e-20 100.9 107 53.3
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 1.3e-19 100.1 107 53.3
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.3e-19 100.1 107 53.3
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 1.7e-19 99.8 107 52.3
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 2.2e-19 99.4 107 52.3
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 2.2e-19 99.4 107 54.2
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 2.9e-19 99.0 107 53.3
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 2.9e-19 99.0 105 55.2
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 3.8e-19 98.6 107 52.3
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 3.8e-19 98.6 107 50.5
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 3.8e-19 98.6 100 56.0
Cpa.g.sc570.2 Carica papaya HOM05D005158 ORTHO05D005510 4.9e-19 98.2 102 55.9
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 4.9e-19 98.2 107 52.3
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 6.5e-19 97.8 107 54.2
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 6.5e-19 97.8 107 52.3
Cc04_g06310 Coffea canephora HOM05D005158 ORTHO05D005510 6.5e-19 97.8 107 49.5
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 6.5e-19 97.8 107 50.5
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 8.4e-19 97.4 107 54.2
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 8.4e-19 97.4 107 50.5
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.1e-18 97.1 105 51.4
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 1.4e-18 96.7 107 49.5
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 1.9e-18 96.3 107 51.4
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 2.5e-18 95.9 107 47.7
Migut.D01553 Erythranthe guttata HOM05D005158 ORTHO05D005510 3.2e-18 95.5 107 47.7
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 4.2e-18 95.1 107 51.4
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 4.2e-18 95.1 105 51.4
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 4.2e-18 95.1 105 51.4
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 5.5e-18 94.7 105 50.5
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 5.5e-18 94.7 107 51.4
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 5.5e-18 94.7 107 51.4
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 5.5e-18 94.7 107 51.4
SalBow1G1317 Salvia bowleyana HOM05D005158 ORTHO05D005510 5.5e-18 94.7 107 48.6
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 7.1e-18 94.4 107 48.6
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 7.1e-18 94.4 107 49.5
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 9.3e-18 94.0 103 51.5
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 9.3e-18 94.0 107 49.5
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 1.2e-17 93.6 105 49.5
CSS0046275 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 2.1e-17 92.8 101 50.5
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 2.1e-17 92.8 107 50.5
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 3.5e-17 92.0 107 48.6
Os03g0707200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 3.5e-17 92.0 107 46.7
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 3.5e-17 92.0 107 49.5
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 1.3e-16 90.1 73 58.9
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 1.8e-16 89.7 107 49.5
Oeu046166.1 Olea europaea HOM05D005158 ORTHO05D005510 3.0e-16 89.0 105 49.5
MD16G1025900 Malus domestica HOM05D005158 ORTHO05D005510 5.1e-16 88.2 63 71.4
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 1.1e-15 87.0 109 48.6
MSTRG.4576 Avicennia marina HOM05D005158 ORTHO05D005510 1.1e-15 87.0 107 46.7
HPP92_016306 Vanilla planifolia HOM05D005158 ORTHO05D005510 4.3e-15 85.1 68 58.8
HPP92_016287 Vanilla planifolia HOM05D005158 ORTHO05D005510 1.3e-14 83.6 67 58.2
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 6.3e-14 81.3 107 47.7
AUR62039517 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.8e-13 79.7 107 45.8
Duzib068G0898 Durio zibethinus HOM05D005158 ORTHO05D005510 6.9e-13 77.8 69 58.0
AUR62014186 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.2e-12 77.0 107 45.8
AagrBONN_evm.TU.Sc2ySwM_344.3657 Anthoceros agrestis HOM05D005158 ORTHO05D005510 1.7e-11 73.2 109 42.2
Pp3c5_19920 Physcomitrium patens HOM05D005158 ORTHO05D005510 1.9e-10 69.7 63 50.8
RcHm_v2.0_Chr7g0199801 Rosa chinensis HOM05D005158 ORTHO05D005510 6.1e-09 64.7 86 44.2
Prupe.5G232800 Prunus persica HOM05D005158 ORTHO05D005510 3.3e-07 58.9 39 64.1
PRCOL_00003969 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 7.4e-07 57.8 66 45.5
SEGI_17459 Sequoiadendron giganteum HOM05D005158 ORTHO05D005510 7.4e-07 57.8 42 64.3
Dinv14415 Davidia involucrata HOM05D005158 ORTHO05D005510 1.3e-06 57.0 45 57.8


User provided reference genes

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