Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p44270 Brassica napus HOM05D007954 ORTHO05D010124 2.4e-124 448.7 214 100.0
C06p43910 Brassica napus HOM05D007954 ORTHO05D010124 4.6e-115 417.9 207 96.6
C06p43900 Brassica napus HOM05D007954 ORTHO05D010124 1.4e-111 406.4 207 94.7
BcaB03g14800 Brassica carinata HOM05D007954 ORTHO05D010124 3.3e-105 385.2 214 88.3
BraA07t31245Z Brassica rapa HOM05D007954 ORTHO05D010124 2.6e-94 349.0 217 79.3
BcaB03g14782 Brassica carinata HOM05D007954 ORTHO05D010124 2.8e-88 328.9 213 77.0
BcaC08g46452 Brassica carinata HOM05D007954 ORTHO05D010124 3.4e-86 322.0 207 76.3
BraA07t31216Z Brassica rapa HOM05D007954 ORTHO05D010124 7.7e-86 320.9 207 76.3
BolC6t39462H Brassica oleracea HOM05D007954 ORTHO05D010124 9.4e-84 313.9 207 77.3
A07p36460 Brassica napus HOM05D007954 ORTHO05D010124 1.0e-82 310.5 215 74.0
BraA07t31217Z Brassica rapa HOM05D007954 ORTHO05D010124 3.9e-82 308.5 215 74.0
BolC6t39464H Brassica oleracea HOM05D007954 ORTHO05D010124 9.7e-81 303.9 213 74.2
BcaC08g46453 Brassica carinata HOM05D007954 ORTHO05D010124 5.3e-79 298.1 222 71.2
BcaC08g46451 Brassica carinata HOM05D007954 ORTHO05D010124 1.5e-73 280.0 145 93.8
BcaC08g46483 Brassica carinata HOM05D007954 ORTHO05D010124 1.7e-64 250.0 121 100.0
AT1G70040 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 2.2e-61 239.6 174 69.0
CARHR063130 Cardamine hirsuta HOM05D007954 ORTHO05D010124 3.0e-58 229.2 154 70.8
AL2G29310 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 9.8e-57 224.2 183 63.9
AL5G35460 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 3.5e-54 215.7 144 72.9
AL2G29370 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 8.5e-53 211.1 166 60.2
Carub.0002s1672 Capsella rubella HOM05D007954 ORTHO05D010124 2.5e-52 209.5 153 67.3
C06p43920 Brassica napus HOM05D007954 ORTHO05D010124 7.2e-52 208.0 114 86.8
BcaB05g24523 Brassica carinata HOM05D007954 ORTHO05D010124 1.6e-51 206.8 165 60.6
BcaB05g24522 Brassica carinata HOM05D007954 ORTHO05D010124 2.7e-51 206.1 154 63.6
A02p16350 Brassica napus HOM05D007954 ORTHO05D010124 2.0e-49 199.9 175 56.6
BraA02t06693Z Brassica rapa HOM05D007954 ORTHO05D010124 2.0e-49 199.9 175 56.6
BolC2t08789H Brassica oleracea HOM05D007954 ORTHO05D010124 5.7e-49 198.4 189 54.0
BcaC03g15156 Brassica carinata HOM05D007954 ORTHO05D010124 2.8e-48 196.1 156 61.5
BcaB05g24528 Brassica carinata HOM05D007954 ORTHO05D010124 4.9e-48 195.3 149 63.1
BcaB06g26987 Brassica carinata HOM05D007954 ORTHO05D010124 4.9e-48 195.3 149 63.1
BcaB03g14778 Brassica carinata HOM05D007954 ORTHO05D010124 5.4e-47 191.8 165 64.2
AT1G70120 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.6e-46 190.3 158 60.8
Carub.0002s1680 Capsella rubella HOM05D007954 ORTHO05D010124 8.6e-45 184.5 157 58.6
A07p36780 Brassica napus HOM05D007954 ORTHO05D010124 7.3e-44 181.4 94 88.3
AL2G29280 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.4e-42 177.2 118 72.0
AT5G39330 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.4e-42 177.2 178 51.1
A07p36450 Brassica napus HOM05D007954 ORTHO05D010124 1.4e-42 177.2 101 84.2
AT3G60700 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 3.2e-39 166.0 142 55.6
AL7G51140 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 2.7e-38 162.9 179 48.6
Thhalv10019156m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 3.9e-37 159.1 157 51.0
CARHR063140 Cardamine hirsuta HOM05D007954 ORTHO05D010124 5.0e-37 158.7 141 54.6
BraA06t27739Z Brassica rapa HOM05D007954 ORTHO05D010124 2.8e-35 152.9 215 37.2
BcaB05g22706 Brassica carinata HOM05D001308 ORTHO05D010124 1.0e-34 151.0 161 49.7
CARHR063150 Cardamine hirsuta HOM05D007954 ORTHO05D010124 1.4e-34 150.6 120 65.8
A07p36600 Brassica napus HOM05D007954 ORTHO05D010124 1.8e-34 150.2 160 50.0
Carub.0007s3660 Capsella rubella HOM05D007954 ORTHO05D010124 2.0e-33 146.7 145 52.4
BcaNung01944 Brassica carinata HOM05D007954 ORTHO05D010124 4.4e-33 145.6 196 39.3
C07p63390 Brassica napus HOM05D007954 ORTHO05D010124 4.4e-33 145.6 196 39.3
Carub.0007s0174 Capsella rubella HOM05D007954 ORTHO05D010124 4.4e-33 145.6 180 42.8
C02p27290 Brassica napus HOM05D007954 ORTHO05D010124 3.7e-32 142.5 156 50.0
BcaNung01945 Brassica carinata HOM05D007954 ORTHO05D010124 6.4e-32 141.7 167 45.5
CARHR263080 Cardamine hirsuta HOM05D007954 ORTHO05D010124 8.3e-32 141.4 141 53.9
AL2G29250 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.4e-31 140.6 146 50.0
AT1G70020 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.4e-31 140.6 150 47.3
C01p17490 Brassica napus HOM05D007954 ORTHO05D010124 1.9e-31 140.2 189 43.4
BraA01t01369Z Brassica rapa HOM05D007954 ORTHO05D010124 2.4e-31 139.8 188 43.1
BcaC09g51050 Brassica carinata HOM05D007954 ORTHO05D010124 4.1e-31 139.0 189 43.9
BolC1t01689H Brassica oleracea HOM05D007954 ORTHO05D010124 4.1e-31 139.0 189 43.9
A01p14220 Brassica napus HOM05D007954 ORTHO05D010124 1.2e-30 137.5 188 42.6
BcaC08g46450 Brassica carinata HOM05D007954 ORTHO05D010124 1.6e-30 137.1 148 46.6
BolC6t39460H Brassica oleracea HOM05D007954 ORTHO05D010124 1.6e-30 137.1 148 46.6
CARHR215600 Cardamine hirsuta HOM05D007954 ORTHO05D010124 2.5e-28 129.8 136 47.1
Carub.0002s1679 Capsella rubella HOM05D007954 ORTHO05D010124 2.1e-27 126.7 123 52.8
A06p48730 Brassica napus HOM05D007954 ORTHO05D010124 8.1e-27 124.8 204 33.8
THA.LOC104822072 Tarenaya hassleriana HOM05D007954 ORTHO05D010124 5.2e-26 122.1 160 42.5
Thhalv10019602m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 6.8e-26 121.7 92 65.2
BcaB03g14781 Brassica carinata HOM05D000629 ORTHO05D000576 1.9e-23 113.6 100 65.0
BcaB03g15527 Brassica carinata HOM05D007954 ORTHO05D010124 6.0e-22 108.6 154 37.7
C06p43870 Brassica napus HOM05D007954 ORTHO05D010124 1.0e-21 107.8 115 46.1
AT3G54410 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 5.6e-20 102.1 85 62.4
BraA07t31226Z Brassica rapa HOM05D007954 ORTHO05D010124 3.6e-19 99.4 111 49.5
BcaB03g15524 Brassica carinata HOM05D007954 ORTHO05D010124 5.2e-18 95.5 113 43.4
BcaNung01946 Brassica carinata HOM05D007954 ORTHO05D010124 6.8e-18 95.1 87 54.0
AL2G29390 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.2e-14 84.3 66 54.5
C06p44000 Brassica napus HOM05D007954 ORTHO05D102319 1.7e-13 80.5 114 43.0
BcaB03g15526 Brassica carinata HOM05D007954 ORTHO05D010124 7.3e-12 75.1 58 55.2
AL2G29260 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 3.6e-11 72.8 75 48.0
AL7G12050 Arabidopsis lyrata HOM05D007954 ORTHO05D080602 3.4e-09 66.2 68 48.5
CARHR263070 Cardamine hirsuta HOM05D007954 ORTHO05D010124 4.4e-09 65.9 56 50.0


User provided reference genes

Program Settings