Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p43870 Brassica napus HOM05D007954 ORTHO05D010124 6.7e-90 334.0 165 100.0
BcaC08g46450 Brassica carinata HOM05D007954 ORTHO05D010124 4.9e-56 221.5 118 94.1
BolC6t39460H Brassica oleracea HOM05D007954 ORTHO05D010124 4.9e-56 221.5 118 94.1
Thhalv10019156m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 2.4e-39 166.0 120 71.7
AT5G39330 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.6e-35 153.3 117 66.7
BcaB03g15524 Brassica carinata HOM05D007954 ORTHO05D010124 6.2e-35 151.4 118 66.9
BcaB05g22706 Brassica carinata HOM05D001308 ORTHO05D010124 2.4e-34 149.4 200 48.5
AL7G51140 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 4.9e-32 141.7 117 61.5
AT1G70020 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 2.1e-30 136.3 119 61.3
Carub.0007s3660 Capsella rubella HOM05D007954 ORTHO05D010124 3.9e-29 132.1 117 59.8
AL2G29250 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.5e-28 130.2 119 59.7
BcaC08g46451 Brassica carinata HOM05D007954 ORTHO05D010124 2.6e-25 119.4 118 48.3
BolC6t39462H Brassica oleracea HOM05D007954 ORTHO05D010124 2.6e-25 119.4 118 48.3
AT1G70040 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.3e-24 117.1 115 48.7
C06p43900 Brassica napus HOM05D007954 ORTHO05D010124 3.8e-24 115.5 115 47.8
C06p43910 Brassica napus HOM05D007954 ORTHO05D010124 3.8e-24 115.5 115 47.8
BraA07t31216Z Brassica rapa HOM05D007954 ORTHO05D010124 6.4e-24 114.8 116 46.6
CARHR263080 Cardamine hirsuta HOM05D007954 ORTHO05D010124 8.4e-24 114.4 106 60.4
BcaB03g14782 Brassica carinata HOM05D007954 ORTHO05D010124 1.4e-23 113.6 118 45.8
BcaC08g46452 Brassica carinata HOM05D007954 ORTHO05D010124 2.4e-23 112.8 116 46.6
Carub.0002s1672 Capsella rubella HOM05D007954 ORTHO05D010124 5.4e-23 111.7 115 47.8
A02p16350 Brassica napus HOM05D007954 ORTHO05D010124 7.1e-23 111.3 120 47.5
BraA02t06693Z Brassica rapa HOM05D007954 ORTHO05D010124 7.1e-23 111.3 120 47.5
AL2G29310 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.6e-22 110.2 119 44.5
AL2G29370 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 7.9e-22 107.8 116 44.8
BcaB05g24522 Brassica carinata HOM05D007954 ORTHO05D010124 1.0e-21 107.5 120 45.8
BcaB05g24523 Brassica carinata HOM05D007954 ORTHO05D010124 1.0e-21 107.5 120 45.8
BcaB03g15527 Brassica carinata HOM05D007954 ORTHO05D010124 1.3e-21 107.1 164 42.7
BcaC08g46483 Brassica carinata HOM05D007954 ORTHO05D010124 1.8e-21 106.7 125 45.6
C06p44270 Brassica napus HOM05D007954 ORTHO05D010124 3.0e-21 105.9 115 46.1
AL2G29260 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 3.9e-21 105.5 164 40.2
BcaC03g15156 Brassica carinata HOM05D007954 ORTHO05D010124 3.9e-21 105.5 120 46.7
BolC2t08789H Brassica oleracea HOM05D007954 ORTHO05D010124 3.9e-21 105.5 120 46.7
BcaC08g46453 Brassica carinata HOM05D007954 ORTHO05D010124 5.1e-21 105.1 115 45.2
BolC6t39464H Brassica oleracea HOM05D007954 ORTHO05D010124 5.1e-21 105.1 115 45.2
AL5G35460 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.1e-20 104.0 118 44.9
CARHR063130 Cardamine hirsuta HOM05D007954 ORTHO05D010124 2.5e-20 102.8 115 43.5
A07p36460 Brassica napus HOM05D007954 ORTHO05D010124 5.6e-20 101.7 115 44.3
BraA07t31217Z Brassica rapa HOM05D007954 ORTHO05D010124 5.6e-20 101.7 115 44.3
A07p36450 Brassica napus HOM05D007954 ORTHO05D010124 1.3e-19 100.5 101 47.5
AT3G60700 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 2.8e-19 99.4 124 41.9
BcaB05g24528 Brassica carinata HOM05D007954 ORTHO05D010124 2.8e-19 99.4 111 45.0
BcaB06g26987 Brassica carinata HOM05D007954 ORTHO05D010124 2.8e-19 99.4 111 45.0
BcaNung01945 Brassica carinata HOM05D007954 ORTHO05D010124 2.8e-19 99.4 116 47.4
Carub.0007s0174 Capsella rubella HOM05D007954 ORTHO05D010124 2.8e-19 99.4 119 40.3
C06p43920 Brassica napus HOM05D007954 ORTHO05D010124 6.2e-19 98.2 125 42.4
CARHR215600 Cardamine hirsuta HOM05D007954 ORTHO05D010124 6.2e-19 98.2 115 43.5
Carub.0002s1680 Capsella rubella HOM05D007954 ORTHO05D010124 8.1e-19 97.8 118 42.4
AT1G70120 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.1e-18 97.4 118 41.5
CARHR263070 Cardamine hirsuta HOM05D007954 ORTHO05D010124 1.1e-18 97.4 59 71.2
BraA06t27739Z Brassica rapa HOM05D007954 ORTHO05D010124 4.0e-18 95.5 116 43.1
BcaNung01944 Brassica carinata HOM05D007954 ORTHO05D010124 6.9e-18 94.7 116 43.1
C07p63390 Brassica napus HOM05D007954 ORTHO05D010124 6.9e-18 94.7 116 43.1
CARHR063140 Cardamine hirsuta HOM05D007954 ORTHO05D010124 9.0e-18 94.4 103 46.6
C02p27290 Brassica napus HOM05D007954 ORTHO05D010124 1.2e-17 94.0 93 52.7
A07p36600 Brassica napus HOM05D007954 ORTHO05D010124 1.5e-17 93.6 115 41.7
BraA07t31245Z Brassica rapa HOM05D007954 ORTHO05D010124 1.5e-17 93.6 88 48.9
AL2G29280 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 3.4e-17 92.4 106 44.3
BcaC09g51050 Brassica carinata HOM05D007954 ORTHO05D010124 5.8e-17 91.7 118 42.4
C01p17490 Brassica napus HOM05D007954 ORTHO05D010124 5.8e-17 91.7 118 42.4
BolC1t01689H Brassica oleracea HOM05D007954 ORTHO05D010124 5.8e-17 91.7 118 42.4
A06p48730 Brassica napus HOM05D007954 ORTHO05D010124 2.2e-16 89.7 118 43.2
BraA01t01369Z Brassica rapa HOM05D007954 ORTHO05D010124 2.9e-16 89.4 118 41.5
A01p14220 Brassica napus HOM05D007954 ORTHO05D010124 2.4e-15 86.3 118 40.7
BcaB03g14800 Brassica carinata HOM05D007954 ORTHO05D010124 9.3e-15 84.3 79 49.4
Thhalv10019602m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 1.2e-14 84.0 94 44.7
Carub.0002s1679 Capsella rubella HOM05D007954 ORTHO05D010124 1.8e-13 80.1 114 41.2
THA.LOC104822072 Tarenaya hassleriana HOM05D007954 ORTHO05D010124 6.7e-13 78.2 114 35.1
AL2G29390 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.1e-12 77.4 64 51.6
AT3G54410 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 3.1e-10 69.3 78 43.6
BcaB03g14778 Brassica carinata HOM05D007954 ORTHO05D010124 1.5e-09 67.0 118 35.6
BcaNung01946 Brassica carinata HOM05D007954 ORTHO05D010124 2.1e-06 56.6 68 44.1


User provided reference genes

Program Settings