Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p43370 Brassica napus HOM05D010512 ORTHO05D013732 4.1e-43 177.6 83 100.0
BolC6t39414H Brassica oleracea HOM05D010512 ORTHO05D013732 5.9e-42 173.7 83 97.6
BraA07t31180Z Brassica rapa HOM05D010512 ORTHO05D013732 5.3e-35 150.6 83 83.1
A07p35970 Brassica napus HOM05D010512 ORTHO05D013732 1.2e-34 149.4 83 81.9
BolC6t39410H Brassica oleracea HOM05D010512 ORTHO05D013732 1.7e-25 119.0 84 69.0
A07p35960 Brassica napus HOM05D010512 ORTHO05D013732 6.5e-25 117.1 84 67.9
BraA07t31179Z Brassica rapa HOM05D010512 ORTHO05D013732 6.5e-25 117.1 84 67.9
Thhalv10015683m.g Eutrema salsugineum HOM05D010512 ORTHO05D013732 2.5e-24 115.2 79 68.4
AL8G29460 Arabidopsis lyrata HOM05D010512 ORTHO05D013732 8.8e-22 106.7 83 63.9
AT5G54215 Arabidopsis thaliana HOM05D010512 ORTHO05D013732 1.5e-21 105.9 83 62.7
C07p04990 Brassica napus HOM05D010512 ORTHO05D028030 2.8e-20 101.7 83 59.0
BolC7t40900H Brassica oleracea HOM05D010512 ORTHO05D028030 4.8e-20 100.9 83 57.8
CARHR259740 Cardamine hirsuta HOM05D010512 ORTHO05D013732 1.4e-19 99.4 83 61.4
AL8G29480 Arabidopsis lyrata HOM05D010512 ORTHO05D013732 9.1e-19 96.7 83 57.8
A07p02690 Brassica napus HOM05D010512 ORTHO05D028030 2.7e-18 95.1 83 55.4
BraA07t28069Z Brassica rapa HOM05D010512 ORTHO05D028030 2.7e-18 95.1 83 55.4
AL4G16670 Arabidopsis lyrata HOM05D010512 ORTHO05D013732 1.7e-17 92.4 82 54.9
AT2G25305 Arabidopsis thaliana HOM05D010512 ORTHO05D013732 1.7e-17 92.4 82 54.9
Carub.0008s1453 Capsella rubella HOM05D010512 ORTHO05D013732 3.0e-14 81.6 83 53.0
Carub.0004s0836 Capsella rubella HOM05D010512 ORTHO05D013732 2.0e-13 79.0 80 50.0
AT5G54220 Arabidopsis thaliana HOM05D011674 ORTHO05D013685 2.7e-10 68.6 87 41.4
Thhalv10015134m.g Eutrema salsugineum HOM05D010512 ORTHO05D195761 7.7e-10 67.0 88 43.2
A03p14740 Brassica napus HOM05D011674 ORTHO05D013685 6.5e-09 63.9 80 41.2
BraA03t10765Z Brassica rapa HOM05D011674 ORTHO05D013685 6.5e-09 63.9 80 41.2
C03p17220 Brassica napus HOM05D011674 ORTHO05D013685 1.1e-08 63.2 81 40.7
BolC3t14136H Brassica oleracea HOM05D011674 ORTHO05D013685 1.1e-08 63.2 81 40.7
AL8G29490 Arabidopsis lyrata HOM05D011674 ORTHO05D013685 1.9e-08 62.4 88 40.9
AT1G24062 Arabidopsis thaliana HOM05D011674 ORTHO05D013685 2.1e-07 58.9 89 39.3
Aa31LG3G10180 Aethionema arabicum HOM05D011674 ORTHO05D013685 2.3e-06 55.5 87 36.8


User provided reference genes

Program Settings