Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p43070 Brassica napus HOM05D053251 ORTHO05D000101 9.9e-107 390.2 206 100.0
BcaB03g15211 Brassica carinata HOM05D000171 ORTHO05D000101 1.5e-38 163.7 176 59.7
BolC2t07166H Brassica oleracea HOM05D000405 ORTHO05D000712 2.3e-23 113.2 64 84.4
BcaC03g14815 Brassica carinata HOM05D000171 ORTHO05D000101 5.2e-23 112.1 171 39.2
BcaB05g24243 Brassica carinata HOM05D000171 ORTHO05D000101 1.3e-21 107.5 185 36.2
C02p10960 Brassica napus HOM05D000405 ORTHO05D000712 1.3e-21 107.5 64 81.2
BcaB05g24245 Brassica carinata HOM05D000171 ORTHO05D000101 2.2e-21 106.7 150 41.3
A02p14050 Brassica napus HOM05D000171 ORTHO05D000101 4.9e-21 105.5 178 36.0
BraA02t06466Z Brassica rapa HOM05D000171 ORTHO05D000101 4.9e-21 105.5 178 36.0
BcaC03g14814 Brassica carinata HOM05D000171 ORTHO05D000101 8.3e-21 104.8 175 37.7
BolC2t08420H Brassica oleracea HOM05D000171 ORTHO05D000101 8.3e-21 104.8 201 33.8
C02p22670 Brassica napus HOM05D000171 ORTHO05D000101 5.4e-20 102.1 201 33.3
BolC2t08418H Brassica oleracea HOM05D000171 ORTHO05D000101 5.4e-20 102.1 182 35.7
BcaC03g14813 Brassica carinata HOM05D000171 ORTHO05D000101 2.0e-19 100.1 182 35.7
Thhalv10019545m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 3.5e-19 99.4 176 35.8
C02p22650 Brassica napus HOM05D000171 ORTHO05D000101 1.0e-18 97.8 182 35.2
A02p14060 Brassica napus HOM05D000171 ORTHO05D000101 1.3e-18 97.4 175 35.4
BraA02t06469Z Brassica rapa HOM05D000171 ORTHO05D000101 1.3e-18 97.4 175 35.4
Thhalv10019719m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.9e-17 93.6 209 33.0
Thhalv10019461m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 8.0e-16 88.2 150 35.3
C03p21070 Brassica napus HOM05D000171 ORTHO05D000101 7.5e-14 81.6 115 37.4
BolC3t14489H Brassica oleracea HOM05D000171 ORTHO05D000101 5.4e-12 75.5 164 28.7
AT5G44345 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 6.0e-11 72.0 92 42.4
BcaC01g05920 Brassica carinata HOM05D000171 ORTHO05D000101 1.0e-10 71.2 153 29.4
Thhalv10021999m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.3e-10 70.9 173 30.1
Carub.0004s1336 Capsella rubella HOM05D000171 ORTHO05D000101 6.6e-10 68.6 170 30.0
Thhalv10022123m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.5e-09 66.6 185 28.1
AL1G45620 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.3e-09 65.9 142 29.6
Carub.0002s0293 Capsella rubella HOM05D000171 ORTHO05D000101 4.3e-09 65.9 155 32.9
CARHR043710 Cardamine hirsuta HOM05D000171 ORTHO05D000101 9.5e-09 64.7 84 36.9
CARHR219450 Cardamine hirsuta HOM05D000171 ORTHO05D000101 9.5e-09 64.7 159 28.3
Carub.0004s0542 Capsella rubella HOM05D000171 ORTHO05D000101 1.2e-08 64.3 96 40.6
CARHR126110 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.6e-08 63.9 95 42.1
AL1G53100 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.1e-08 63.5 163 27.6
Carub.0005s1563 Capsella rubella HOM05D000171 ORTHO05D000101 2.1e-08 63.5 88 36.4
Thhalv10017547m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.1e-08 63.5 90 43.3
AL1G61850 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.8e-08 63.2 147 32.0
A04p16910 Brassica napus HOM05D000171 ORTHO05D000101 3.6e-08 62.8 126 28.6
A05p17940 Brassica napus HOM05D000171 ORTHO05D000101 3.6e-08 62.8 88 37.5
BraA04t17323Z Brassica rapa HOM05D000171 ORTHO05D000101 3.6e-08 62.8 126 28.6
Carub.0005s1324 Capsella rubella HOM05D000171 ORTHO05D000101 3.6e-08 62.8 105 36.2
Thhalv10012359m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 3.6e-08 62.8 126 27.0
Aa31LG11G6350 Aethionema arabicum HOM05D000171 ORTHO05D000101 4.7e-08 62.4 79 40.5
AL1G62520 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.7e-08 62.4 141 32.6
C01p00150 Brassica napus HOM05D053251 ORTHO05D099385 4.7e-08 62.4 34 82.4
Carub.0001s2950 Capsella rubella HOM05D000171 ORTHO05D000101 4.7e-08 62.4 81 38.3
AL1G33630 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 6.2e-08 62.0 53 56.6
AL1G51900 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 6.2e-08 62.0 89 39.3
BcaC05g30223 Brassica carinata HOM05D000171 ORTHO05D000101 6.2e-08 62.0 95 36.8
C04p18060 Brassica napus HOM05D000171 ORTHO05D000101 6.2e-08 62.0 82 43.9
CARHR042940 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.2e-08 62.0 182 23.6
AT1G67130 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 8.1e-08 61.6 83 39.8
A04p24790 Brassica napus HOM05D000171 ORTHO05D000101 8.1e-08 61.6 97 41.2
BraA04t17996Z Brassica rapa HOM05D000171 ORTHO05D000101 8.1e-08 61.6 97 41.2
BcaC02g11318 Brassica carinata HOM05D000171 ORTHO05D000101 1.1e-07 61.2 95 41.1
BcaB01g03998 Brassica carinata HOM05D000171 ORTHO05D000101 1.4e-07 60.8 87 35.6
BcaC08g44127 Brassica carinata HOM05D000171 ORTHO05D000101 1.4e-07 60.8 88 37.5
Thhalv10006428m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.4e-07 60.8 88 39.8
C09p71110 Brassica napus HOM05D000171 ORTHO05D000101 1.8e-07 60.5 96 37.5
BraA05t23045Z Brassica rapa HOM05D000171 ORTHO05D000101 1.8e-07 60.5 83 41.0
Carub.0001s3824 Capsella rubella HOM05D000171 ORTHO05D000101 1.8e-07 60.5 61 49.2
Aa31LG11G6320 Aethionema arabicum HOM05D000171 ORTHO05D000101 2.3e-07 60.1 124 29.0
BcaB01g00708 Brassica carinata HOM05D000171 ORTHO05D000101 2.3e-07 60.1 137 28.5
BcaB02g10412 Brassica carinata HOM05D000171 ORTHO05D000101 3.1e-07 59.7 96 38.5
BcaB06g28423 Brassica carinata HOM05D000171 ORTHO05D000101 3.1e-07 59.7 83 41.0
A05p43010 Brassica napus HOM05D000171 ORTHO05D000101 3.1e-07 59.7 83 41.0
BolC3t13623H Brassica oleracea HOM05D000171 ORTHO05D000101 4.0e-07 59.3 131 29.0
C03p11510 Brassica napus HOM05D000171 ORTHO05D000101 5.2e-07 58.9 130 28.5
CARHR045190 Cardamine hirsuta HOM05D000171 ORTHO05D000101 5.2e-07 58.9 121 30.6
AT5G65850 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 6.8e-07 58.5 177 28.8
C04p18490 Brassica napus HOM05D000171 ORTHO05D000101 6.8e-07 58.5 96 39.6
C04p61700 Brassica napus HOM05D000171 ORTHO05D000101 6.8e-07 58.5 98 41.8
C04p61720 Brassica napus HOM05D000171 ORTHO05D000101 6.8e-07 58.5 98 41.8
C09p71130 Brassica napus HOM05D000171 ORTHO05D040262 6.8e-07 58.5 126 27.8
BolC4t23372H Brassica oleracea HOM05D000171 ORTHO05D000101 6.8e-07 58.5 138 33.3
BolC9t59875H Brassica oleracea HOM05D000171 ORTHO05D000101 6.8e-07 58.5 94 33.0
AL1G63830 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 8.9e-07 58.2 124 31.5
BolC9t59874H Brassica oleracea HOM05D000171 ORTHO05D000101 8.9e-07 58.2 96 36.5
Thhalv10012287m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 8.9e-07 58.2 91 34.1
Thhalv10020859m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 8.9e-07 58.2 174 27.6
Sp4g14420 Schrenkiella parvula HOM05D000171 ORTHO05D000101 8.9e-07 58.2 96 38.5
Aa31LG4G4140 Aethionema arabicum HOM05D000171 ORTHO05D000101 1.2e-06 57.8 48 45.8
Aa31LG6G12130 Aethionema arabicum HOM05D000171 ORTHO05D000101 1.2e-06 57.8 43 51.2
AL1G45210 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.2e-06 57.8 81 40.7
A10p30640 Brassica napus HOM05D000171 ORTHO05D000101 1.2e-06 57.8 86 37.2
C09p71120 Brassica napus HOM05D000171 ORTHO05D000101 1.2e-06 57.8 89 38.2
BolC4t27670H Brassica oleracea HOM05D000171 ORTHO05D000101 1.2e-06 57.8 83 38.6
Sp5g12630 Schrenkiella parvula HOM05D000171 ORTHO05D000101 1.2e-06 57.8 50 50.0
Aa31LG3G13420 Aethionema arabicum HOM05D000171 ORTHO05D000101 1.5e-06 57.4 41 48.8
A05p43020 Brassica napus HOM05D000171 ORTHO05D000101 1.5e-06 57.4 84 36.9
BraA04t17914Z Brassica rapa HOM05D000171 ORTHO05D000101 1.5e-06 57.4 83 39.8
BraA05t23046Z Brassica rapa HOM05D000171 ORTHO05D000101 1.5e-06 57.4 84 36.9
Carub.0001s4310 Capsella rubella HOM05D000171 ORTHO05D000101 1.5e-06 57.4 53 56.6
BcaC02g07940 Brassica carinata HOM05D000171 ORTHO05D000101 2.0e-06 57.0 98 41.8
BolC4t27654H Brassica oleracea HOM05D000171 ORTHO05D000101 2.0e-06 57.0 98 41.8
CARHR030590 Cardamine hirsuta HOM05D000171 ORTHO05D000101 2.0e-06 57.0 84 35.7
AL1G53520 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.6e-06 56.6 124 33.1
AT1G53790 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.6e-06 56.6 89 36.0
Aa31LG6G10620 Aethionema arabicum HOM05D000171 ORTHO05D000101 3.4e-06 56.2 104 28.8
A01p12880 Brassica napus HOM05D000171 ORTHO05D000101 3.4e-06 56.2 123 28.5
A04p23920 Brassica napus HOM05D000171 ORTHO05D000101 3.4e-06 56.2 79 38.0
C09p67730 Brassica napus HOM05D000171 ORTHO05D000101 3.4e-06 56.2 90 35.6
BraA01t01232Z Brassica rapa HOM05D000171 ORTHO05D000101 3.4e-06 56.2 123 28.5
BraA04t17916Z Brassica rapa HOM05D000171 ORTHO05D000101 3.4e-06 56.2 79 38.0
Thhalv10012153m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 3.4e-06 56.2 46 56.5
Aa31LG10G1480 Aethionema arabicum HOM05D000171 ORTHO05D000101 4.4e-06 55.8 88 33.0
Aa31LG11G6230 Aethionema arabicum HOM05D000171 ORTHO05D000101 4.4e-06 55.8 43 48.8
AT3G49440 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 4.4e-06 55.8 88 35.2
BcaB02g09590 Brassica carinata HOM05D000171 ORTHO05D000101 4.4e-06 55.8 87 36.8
BcaB06g28545 Brassica carinata HOM05D000171 ORTHO05D000101 4.4e-06 55.8 82 42.7
A04p34160 Brassica napus HOM05D000171 ORTHO05D000101 4.4e-06 55.8 167 28.7
C04p60550 Brassica napus HOM05D000171 ORTHO05D000101 4.4e-06 55.8 79 38.0
C04p60620 Brassica napus HOM05D000171 ORTHO05D000101 4.4e-06 55.8 79 38.0
C04p71950 Brassica napus HOM05D000171 ORTHO05D000101 4.4e-06 55.8 81 38.3
BolC4t23399H Brassica oleracea HOM05D000171 ORTHO05D000101 4.4e-06 55.8 96 37.5
Carub.0001s4256 Capsella rubella HOM05D000171 ORTHO05D000101 4.4e-06 55.8 64 46.9
Aa31LG11G6130 Aethionema arabicum HOM05D000171 ORTHO05D000101 5.8e-06 55.5 43 48.8
A08p30330 Brassica napus HOM05D000171 ORTHO05D000101 5.8e-06 55.5 119 31.1
AL3G22554 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 7.5e-06 55.1 83 39.8
BcaB02g10391 Brassica carinata HOM05D000171 ORTHO05D000101 7.5e-06 55.1 88 37.5
A05p41800 Brassica napus HOM05D000171 ORTHO05D027719 7.5e-06 55.1 95 33.7
BolC9t59535H Brassica oleracea HOM05D000171 ORTHO05D000101 7.5e-06 55.1 90 35.6
BraA05t22899Z Brassica rapa HOM05D000171 ORTHO05D027719 7.5e-06 55.1 95 33.7
Carub.0001s3050 Capsella rubella HOM05D000171 ORTHO05D000101 7.5e-06 55.1 52 50.0
CARHR044030 Cardamine hirsuta HOM05D000171 ORTHO05D000101 7.5e-06 55.1 177 26.0
Aa31LG11G6240 Aethionema arabicum HOM05D000171 ORTHO05D000101 9.9e-06 54.7 77 33.8
Aa31LG6G10430 Aethionema arabicum HOM05D000171 ORTHO05D000101 9.9e-06 54.7 87 37.9
AL2G14000 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 9.9e-06 54.7 46 56.5
AL8G43560 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 9.9e-06 54.7 96 38.5
Carub.0004s0453 Capsella rubella HOM05D000171 ORTHO05D000101 9.9e-06 54.7 51 49.0
Thhalv10006464m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 9.9e-06 54.7 86 33.7


User provided reference genes

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